Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001945826_1016-2493
Len: 1,477 bp
Hits: 20
E-val: 2.40E-23
Sim: 100%
|
NP_956915.1poly(A) polymerase gamma |
GO:0006397P:mRNA processing GO:0006954P:inflammatory response GO:0007249P:canonical NF-kappaB signal transduction GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0031123P:RNA 3'-end processing GO:0033554P:cellular response to stress GO:0034097P:response to cytokine GO:0038061P:non-canonical NF-kappaB signal transduction GO:0045087P:innate immune response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003723F:RNA binding GO:0005524F:ATP binding GO:1990817F:poly(A) RNA polymerase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
Transcription Regulation
|
|
SRR953582_primary_scf7180001945857_1-2133
Len: 2,132 bp
Hits: 20
E-val: 1.90E-48
Sim: 70.12%
|
XP_018938380.1 solute carrier family 23 member 1-like |
GO:0015882P:L-ascorbic acid transmembrane transport GO:0008520F:L-ascorbate:sodium symporter activity GO:0015229F:L-ascorbic acid transmembrane transporter activity GO:0016324C:apical plasma membrane |
Membrane Transport
|
|
SRR953582_primary_scf7180001945913_1-3582
Len: 3,581 bp
Hits: 20
E-val: 2.40E-77
Sim: 65.85%
|
XP_018968371.1 mediator of RNA polymerase II transcription subunit 13-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946060_572-3893
Len: 3,321 bp
Hits: 20
E-val: 2.30E-74
Sim: 89.75%
|
XP_016347471.1 protein KIBRA-like |
GO:0006355P:regulation of DNA-templated transcription GO:0016477P:cell migration GO:0032475P:otolith formation GO:0035330P:regulation of hippo signaling GO:0046621P:negative regulation of organ growth GO:0071599P:otic vesicle development GO:0003676F:nucleic acid binding GO:0004535F:poly(A)-specific ribonuclease activity GO:0019900F:kinase binding GO:0060090F:molecular adaptor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030014C:CCR4-NOT complex |
Signal Transduction
|
|
SRR953582_primary_scf7180001946093_1-1636
Len: 1,635 bp
Hits: 20
E-val: 1.20E-82
Sim: 68.2%
|
XP_018976188.1 protein angel homolog 1-like |
GO:0000175F:3'-5'-RNA exonuclease activity GO:0003730F:mRNA 3'-UTR binding |
DNA Metabolism
|
|
SRR953582_primary_scf7180001946108_1-3040
Len: 3,039 bp
Hits: 20
E-val: 4.40E-27
Sim: 53.66%
|
XP_018935218.1 protein LSM12 homolog B-like |
GO:0008150P:biological_process GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0003674F:molecular_function GO:0003723F:RNA binding GO:0005575C:cellular_component GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001946175_1-1303
Len: 1,302 bp
Hits: 20
E-val: 2.00E-77
Sim: 75.14%
|
XP_018946914.1 tyrosine-protein kinase BAZ1B-like |
GO:0006338P:chromatin remodeling GO:0006974P:DNA damage response GO:0043687P:post-translational protein modification GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0042393F:histone binding GO:0140801F:histone H2AXY142 kinase activity GO:0090535C:WICH complex |
Signal Transduction
|
|
SRR953582_primary_scf7180001946184_788-2401
Len: 1,613 bp
Hits: 20
E-val: 2.80E-291
Sim: 93.26%
|
XP_018970748.1 sorbin and SH3 domain-containing protein 2-like |
Other
|
|
|
SRR953582_primary_scf7180001946231_537-3276
Len: 2,739 bp
Hits: 20
E-val: 1.30E-291
Sim: 67.31%
|
XP_018954946.1 LOW QUALITY PROTEIN: zinc finger protein 703-like |
GO:0007368P:determination of left/right symmetry GO:0030902P:hindbrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0048596P:embryonic camera-type eye morphogenesis GO:0060271P:cilium assembly GO:0008270F:zinc ion binding GO:0042826F:histone deacetylase binding GO:0000118C:histone deacetylase complex GO:0005737C:cytoplasm |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946256_1045-2666
Len: 1,621 bp
Hits: 20
E-val: 1.30E-65
Sim: 79.44%
|
CDQ89983.1unnamed protein product |
GO:0006406P:mRNA export from nucleus GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946267_1473-2348
Len: 875 bp
Hits: 20
E-val: 1.20E-155
Sim: 94.62%
|
XP_018976930.1 protein Daple-like isoform X1 |
GO:0001841P:neural tube formation GO:0003383P:apical constriction GO:0007264P:small GTPase-mediated signal transduction GO:0016055P:Wnt signaling pathway GO:0030705P:cytoskeleton-dependent intracellular transport GO:0031122P:cytoplasmic microtubule organization GO:0001965F:G-protein alpha-subunit binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005543F:phospholipid binding GO:0008017F:microtubule binding GO:0051959F:dynein light intermediate chain binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0016020C:membrane GO:0070161C:anchoring junction |
Cell Signaling
|
|
SRR953582_primary_scf7180001946275_491-1073
Len: 582 bp
Hits: 20
E-val: 1.30E-41
Sim: 92.54%
|
XP_016094468.1 ankyrin-1-like |
Other
|
|
|
SRR953582_primary_scf7180001946276_458-2536
Len: 2,078 bp
Hits: 20
E-val: 8.50E-131
Sim: 95.81%
|
XP_018927735.1 inhibitor of growth protein 1-like isoform X1 |
GO:0006325P:chromatin organization GO:0045893P:positive regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946316_1-2604
Len: 2,603 bp
Hits: 20
E-val: 1.40E-69
Sim: 62.1%
|
XP_016120100.1 cleft lip and palate transmembrane protein 1 homolog |
GO:0030154P:cell differentiation GO:0003674F:molecular_function GO:0012505C:endomembrane system GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001946335_1-2894
Len: 2,893 bp
Hits: 20
E-val: 1.40E-94
Sim: 95.55%
|
XP_018928236.1 desmin-like |
GO:0006936P:muscle contraction GO:0007626P:locomotory behavior GO:0045109P:intermediate filament organization GO:0060538P:skeletal muscle organ development GO:0005200F:structural constituent of cytoskeleton GO:0005882C:intermediate filament GO:0005911C:cell-cell junction GO:0030018C:Z disc GO:0042383C:sarcolemma |
Other
|
|
SRR953582_primary_scf7180001946347_1-3967
Len: 3,966 bp
Hits: 20
E-val: 1.70E-10
Sim: 100%
|
KPP72276.1Tnnt3b protein-like |
GO:0006937P:regulation of muscle contraction GO:0045214P:sarcomere organization GO:0005523F:tropomyosin binding GO:0030172F:troponin C binding GO:0031013F:troponin I binding GO:0005861C:troponin complex |
Other
|
|
SRR953582_primary_scf7180001946365_1-5196
Len: 5,195 bp
Hits: 20
E-val: 1.70E-58
Sim: 83.85%
|
XP_018940771.1 nuclear receptor subfamily 1 group D member 1-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030154P:cell differentiation GO:0030522P:intracellular receptor signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
|
|
SRR953582_primary_scf7180001946368_857-1684
Len: 827 bp
Hits: 20
E-val: 2.40E-84
Sim: 60.45%
|
RXN17961.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
GO:0006044P:N-acetylglucosamine metabolic process GO:0006357P:regulation of transcription by RNA polymerase II GO:0006790P:sulfur compound metabolic process GO:0001517F:N-acetylglucosamine 6-O-sulfotransferase activity GO:0008146F:sulfotransferase activity GO:0016740F:transferase activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946413_1-2760
Len: 2,759 bp
Hits: 20
E-val: 1.50E-180
Sim: 80.64%
|
XP_018938289.1 CTTNBP2 N-terminal-like protein |
GO:0005737C:cytoplasm GO:0042995C:cell projection |
Other
|
|
SRR953582_primary_scf7180001946414_1-3858
Len: 3,857 bp
Hits: 20
E-val: 2.30E-20
Sim: 94.79%
|
XP_018959276.1 solute carrier family 41 member 2-like |
GO:0030001P:metal ion transport GO:0098655P:monoatomic cation transmembrane transport GO:0008324F:monoatomic cation transmembrane transporter activity GO:0005886C:plasma membrane |
Ion Transport
|
|
SRR953582_primary_scf7180001946455_1-2282
Len: 2,281 bp
Hits: 20
E-val: 4.60E-271
Sim: 85.02%
|
XP_018959720.1 LOW QUALITY PROTEIN: small G protein signaling modulator 1-like |
GO:0005096F:GTPase activator activity GO:0031410C:cytoplasmic vesicle |
Other
|
|
SRR953582_primary_scf7180001946458_1-3649
Len: 3,648 bp
Hits: 20
E-val: 9.50E-77
Sim: 84.07%
|
XP_018925110.1 coiled-coil domain-containing protein 66-like isoform X1 |
Other
|
|
|
SRR953582_primary_scf7180001946492_1996-2418
Len: 422 bp
Hits: 20
E-val: 4.60E-52
Sim: 77.74%
|
XP_026113430.1protein sidekick-1-like isoform X1 |
GO:0007399P:nervous system development GO:0016043P:cellular component organization GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180001946514_1-1325
Len: 1,324 bp
Hits: 20
E-val: 2.30E-20
Sim: 99.84%
|
CDQ97632.1unnamed protein product |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032332P:positive regulation of chondrocyte differentiation GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001946522_1-4028
Len: 4,027 bp
Hits: 20
E-val: 1.90E-22
Sim: 96.31%
|
XP_018939357.1 active breakpoint cluster region-related protein-like, partial |
GO:0035556P:intracellular signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0016020C:membrane GO:0030424C:axon GO:0043197C:dendritic spine |
Signal Transduction
|