Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001947210_1-2462
Len: 2,461 bp
Hits: 20
E-val: 1.10E-60
Sim: 67.58%
|
XP_026125140.1DNA methyltransferase 1-associated protein 1-like |
GO:0045892P:negative regulation of DNA-templated transcription GO:0060041P:retina development in camera-type eye GO:0000785C:chromatin GO:0005634C:nucleus GO:1902494C:catalytic complex |
Transcription Regulation
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SRR953582_primary_scf7180001947220_1147-2275
Len: 1,128 bp
Hits: 20
E-val: 4.00E-26
Sim: 93.95%
|
RXN04749.1pituitary homeobox 1 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947260_881-1288
Len: 407 bp
Hits: 20
E-val: 6.00E-73
Sim: 98.01%
|
XP_018968846.1 ligand of Numb protein X 2-like |
GO:0031017P:exocrine pancreas development GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR953582_primary_scf7180001947333_1477-3081
Len: 1,604 bp
Hits: 20
E-val: 5.00E-14
Sim: 96.59%
|
XP_026085048.1protein numb homolog isoform X3 |
GO:0050769P:positive regulation of neurogenesis GO:0016323C:basolateral plasma membrane GO:0031410C:cytoplasmic vesicle |
Other
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SRR953582_primary_scf7180001947374_112-1140
Len: 1,028 bp
Hits: 20
E-val: 9.80E-189
Sim: 87.09%
|
XP_018962809.1 zinc finger protein 536-like |
GO:0030903P:notochord development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947390_2266-3143
Len: 877 bp
Hits: 20
E-val: 1.40E-39
Sim: 97.81%
|
XP_016118978.1 GATA-binding factor 2-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003190P:atrioventricular valve formation GO:0021514P:ventral spinal cord interneuron differentiation GO:0035912P:dorsal aorta morphogenesis GO:0045165P:cell fate commitment GO:0045766P:positive regulation of angiogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048821P:erythrocyte development GO:0060215P:primitive hemopoiesis GO:1902895P:positive regulation of miRNA transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947403_1-1242
Len: 1,241 bp
Hits: 9
E-val: 1.10E-08
Sim: 84.49%
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XP_021475457.1sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like |
GO:0070588P:calcium ion transmembrane transport GO:0005388F:P-type calcium transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0033017C:sarcoplasmic reticulum membrane |
Membrane Transport
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SRR953582_primary_scf7180001947434_1393-2787
Len: 1,394 bp
Hits: 20
E-val: 4.80E-29
Sim: 52.33%
|
RXN06551.1plasma membrane calcium-transporting ATPase 1-like isoform X1 |
GO:0006816P:calcium ion transport GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0005388F:P-type calcium transporter activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030165F:PDZ domain binding GO:0005886C:plasma membrane GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Ion Transport
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SRR953582_primary_scf7180001947454_391-2118
Len: 1,727 bp
Hits: 20
E-val: 0
Sim: 89.36%
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XP_018955351.1 probable tubulin polyglutamylase TTLL2 |
GO:0000226P:microtubule cytoskeleton organization GO:0006508P:proteolysis GO:0036211P:protein modification process GO:0004252F:serine-type endopeptidase activity GO:0015631F:tubulin binding GO:0070740F:tubulin-glutamic acid ligase activity GO:0036064C:ciliary basal body |
Protein Degradation
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SRR953582_primary_scf7180001947529_65-1108
Len: 1,043 bp
Hits: 20
E-val: 9.70E-27
Sim: 99.21%
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XP_018946577.1 glycerol-3-phosphate dehydrogenase, mitochondrial-like |
GO:0006072P:glycerol-3-phosphate metabolic process GO:0004368F:glycerol-3-phosphate dehydrogenase (quinone) activity GO:0005509F:calcium ion binding GO:0005739C:mitochondrion |
Metabolism
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SRR953582_primary_scf7180001947566_592-2293
Len: 1,701 bp
Hits: 20
E-val: 2.40E-155
Sim: 94.29%
|
XP_018932029.1 doublesex- and mab-3-related transcription factor A2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007281P:germ cell development GO:0007548P:sex differentiation GO:0021537P:telencephalon development GO:0060128P:corticotropin hormone secreting cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043130F:ubiquitin binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001947571_1-2631
Len: 2,630 bp
Hits: 20
E-val: 1.90E-26
Sim: 99.42%
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XP_016137652.1 sodium bicarbonate cotransporter 3-like |
GO:0015698P:inorganic anion transport GO:0015701P:bicarbonate transport GO:0035725P:sodium ion transmembrane transport GO:0051453P:regulation of intracellular pH GO:0098656P:monoatomic anion transmembrane transport GO:0005452F:solute:inorganic anion antiporter activity GO:0008509F:monoatomic anion transmembrane transporter activity GO:0008510F:sodium:bicarbonate symporter activity GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Ion Transport
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SRR953582_primary_scf7180001947578_1-2044
Len: 2,043 bp
Hits: 20
E-val: 8.80E-40
Sim: 75.97%
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CAG02477.1unnamed protein product |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0010795P:regulation of ubiquinone biosynthetic process GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0046872F:metal ion binding GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005739C:mitochondrion |
Signal Transduction
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SRR953582_primary_scf7180001947647_1158-4788
Len: 3,630 bp
Hits: 20
E-val: 1.20E-71
Sim: 61.74%
|
XP_018960377.1 WD repeat-containing protein 82-like |
GO:0016070P:RNA metabolic process GO:0043229C:intracellular organelle |
Metabolism
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SRR953582_primary_scf7180001947651_1-333
Len: 332 bp
Hits: 20
E-val: 1.30E-12
Sim: 99.51%
|
XP_022530358.1ras-associated and pleckstrin homology domains-containing protein 1-like isoform X3 |
Other
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SRR953582_primary_scf7180001947653_1-4676
Len: 4,675 bp
Hits: 20
E-val: 3.40E-55
Sim: 90.89%
|
XP_018921984.1 tyrosine-protein kinase ABL1 isoform X1 |
GO:0001843P:neural tube closure GO:0001922P:B-1 B cell homeostasis GO:0002322P:B cell proliferation involved in immune response GO:0002333P:transitional one stage B cell differentiation GO:0006298P:mismatch repair GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0007229P:integrin-mediated signaling pathway GO:0008306P:associative learning GO:0008630P:intrinsic apoptotic signaling pathway in response to DNA damage GO:0009410P:response to xenobiotic stimulus GO:0009791P:post-embryonic development GO:0010506P:regulation of autophagy GO:0021587P:cerebellum morphogenesis GO:0022408P:negative regulation of cell-cell adhesion GO:0030035P:microspike assembly GO:0030041P:actin filament polymerization GO:0030100P:regulation of endocytosis GO:0030514P:negative regulation of BMP signaling pathway GO:0030516P:regulation of axon extension GO:0030845P:phospholipase C-inhibiting G protein-coupled receptor signaling pathway GO:0031113P:regulation of microtubule polymerization GO:0032489P:regulation of Cdc42 protein signal transduction GO:0032729P:positive regulation of type II interferon production GO:0032743P:positive regulation of interleukin-2 production GO:0033690P:positive regulation of osteoblast proliferation GO:0034976P:response to endoplasmic reticulum stress GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0038083P:peptidyl-tyrosine autophosphorylation GO:0038096P:Fc-gamma receptor signaling pathway involved in phagocytosis GO:0038189P:neuropilin signaling pathway GO:0042770P:signal transduction in response to DNA damage GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0043525P:positive regulation of neuron apoptotic process GO:0045580P:regulation of T cell differentiation GO:0045907P:positive regulation of vasoconstriction GO:0045930P:negative regulation of mitotic cell cycle GO:0045931P:positive regulation of mitotic cell cycle GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046632P:alpha-beta T cell differentiation GO:0048146P:positive regulation of fibroblast proliferation GO:0048536P:spleen development GO:0048538P:thymus development GO:0050731P:positive regulation of peptidyl-tyrosine phosphorylation GO:0050798P:activated T cell proliferation GO:0050852P:T cell receptor signaling pathway GO:0050853P:B cell receptor signaling pathway GO:0050885P:neuromuscular process controlling balance GO:0051281P:positive regulation of release of sequestered calcium ion into cytosol GO:0051353P:positive regulation of oxidoreductase activity GO:0051444P:negative regulation of ubiquitin-protein transferase activity GO:0051450P:myoblast proliferation GO:0051496P:positive regulation of stress fiber assembly GO:0051649P:establishment of localization in cell GO:0051882P:mitochondrial depolarization GO:0051894P:positive regulation of focal adhesion assembly GO:0060020P:Bergmann glial cell differentiation GO:0060038P:cardiac muscle cell proliferation GO:0060563P:neuroepithelial cell differentiation GO:0070301P:cellular response to hydrogen peroxide GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0071103P:DNA conformation change GO:0071222P:cellular response to lipopolysaccharide GO:0071560P:cellular response to transforming growth factor beta stimulus GO:0071871P:response to epinephrine GO:0090050P:positive regulation of cell migration involved in sprouting angiogenesis GO:0097706P:vascular endothelial cell response to oscillatory fluid shear stress GO:0099150P:regulation of postsynaptic specialization assembly GO:1900006P:positive regulation of dendrite development GO:1900026P:positive regulation of substrate adhesion-dependent cell spreading GO:1900272P:negative regulation of long-term synaptic potentiation GO:1902036P:regulation of hematopoietic stem cell differentiation GO:1903055P:positive regulation of extracellular matrix organization GO:1903210P:podocyte apoptotic process GO:1903351P:cellular response to dopamine GO:1903905P:positive regulation of establishment of T cell polarity GO:1904157P:DN4 thymocyte differentiation GO:1904518P:protein localization to cytoplasmic microtubule plus-end GO:1904531P:positive regulation of actin filament binding GO:1905244P:regulation of modification of synaptic structure GO:1905555P:positive regulation of blood vessel branching GO:1990051P:activation of protein kinase C activity GO:2000042P:negative regulation of double-strand break repair via homologous recombination GO:2000096P:positive regulation of Wnt signaling pathway, planar cell polarity pathway GO:2000352P:negative regulation of endothelial cell apoptotic process GO:2000406P:positive regulation of T cell migration GO:2000773P:negative regulation of cellular senescence GO:0000287F:magnesium ion binding GO:0000400F:four-way junction DNA binding GO:0000405F:bubble DNA binding GO:0001784F:phosphotyrosine residue binding GO:0003713F:transcription coactivator activity GO:0003785F:actin monomer binding GO:0004515F:nicotinate-nucleotide adenylyltransferase activity GO:0004674F:protein serine/threonine kinase activity GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005080F:protein kinase C binding GO:0005096F:GTPase activator activity GO:0005524F:ATP binding GO:0017124F:SH3 domain binding GO:0019905F:syntaxin binding GO:0030145F:manganese ion binding GO:0038191F:neuropilin binding GO:0042169F:SH2 domain binding GO:0046875F:ephrin receptor binding GO:0051015F:actin filament binding GO:0051019F:mitogen-activated protein kinase binding GO:0070064F:proline-rich region binding GO:0070097F:delta-catenin binding GO:1990837F:sequence-specific double-stranded DNA binding GO:0001726C:ruffle GO:0005730C:nucleolus GO:0005739C:mitochondrion GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0014069C:postsynaptic density GO:0015629C:actin cytoskeleton GO:0016604C:nuclear body GO:0030425C:dendrite GO:0030426C:growth cone GO:0031965C:nuclear membrane GO:0032991C:protein-containing complex GO:0043025C:neuronal cell body GO:0048471C:perinuclear region of cytoplasm GO:0098978C:glutamatergic synapse |
Signal Transduction
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SRR953582_primary_scf7180001947668_1-737
Len: 736 bp
Hits: 20
E-val: 1.50E-13
Sim: 64.52%
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XP_026101841.1kinesin light chain 2-like |
Other
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SRR953582_primary_scf7180001947784_1-1619
Len: 1,618 bp
Hits: 20
E-val: 5.90E-39
Sim: 95.19%
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ALJ52072.1acyl-CoA oxidase 3, partial |
GO:0033540P:fatty acid beta-oxidation using acyl-CoA oxidase GO:0055088P:lipid homeostasis GO:0005504F:fatty acid binding GO:0016402F:pristanoyl-CoA oxidase activity GO:0071949F:FAD binding GO:0005777C:peroxisome |
Other
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SRR953582_primary_scf7180001947787_1-2166
Len: 2,165 bp
Hits: 20
E-val: 3.80E-09
Sim: 82.15%
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XP_018918438.1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like |
GO:0016042P:lipid catabolic process GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity GO:0005509F:calcium ion binding GO:0043231C:intracellular membrane-bounded organelle GO:0098794C:postsynapse |
Cell Signaling
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SRR953582_primary_scf7180001947799_1-3227
Len: 3,226 bp
Hits: 20
E-val: 6.50E-29
Sim: 63.18%
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XP_016325373.1 segment polarity protein dishevelled homolog DVL-2-like |
GO:0007165P:signal transduction GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180001947846_1-2350
Len: 2,349 bp
Hits: 20
E-val: 0
Sim: 85.22%
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XP_018926524.1 LOW QUALITY PROTEIN: protocadherin-23-like |
GO:0000902P:cell morphogenesis GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0060536P:cartilage morphogenesis GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR953582_primary_scf7180001947863_2746-3118
Len: 372 bp
Hits: 20
E-val: 1.80E-20
Sim: 98.43%
|
XP_013129831.2high mobility group protein B1 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009409P:response to cold GO:0030900P:forebrain development GO:0031103P:axon regeneration GO:0051013P:microtubule severing GO:0051301P:cell division GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0008301F:DNA binding, bending GO:0008568F:microtubule severing ATPase activity GO:0016887F:ATP hydrolysis activity GO:0000922C:spindle pole GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005874C:microtubule GO:0005886C:plasma membrane |
Transcription Regulation
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SRR953582_primary_scf7180001947942_1-3393
Len: 3,392 bp
Hits: 20
E-val: 3.50E-134
Sim: 81.51%
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XP_016126591.1 FERM domain-containing protein 4B-like |
GO:0090162P:establishment of epithelial cell polarity GO:0008092F:cytoskeletal protein binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005912C:adherens junction GO:0005923C:bicellular tight junction |
Other
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SRR953582_primary_scf7180001947959_1-2876
Len: 2,875 bp
Hits: 20
E-val: 1.10E-59
Sim: 98.99%
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XP_018941493.1 nectin-1-like isoform X1 |
GO:0007156P:homophilic cell-cell adhesion GO:0007157P:heterophilic cell-cell adhesion GO:1902414P:protein localization to cell junction GO:0005886C:plasma membrane GO:0005912C:adherens junction |
Other
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SRR953582_primary_scf7180001948132_2487-3046
Len: 559 bp
Hits: 20
E-val: 5.00E-30
Sim: 92.7%
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XP_016111804.1 UPF0160 protein MYG1, mitochondrial-like |
GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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