Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001950722_1-3391
Len: 3,390 bp
Hits: 20
E-val: 0
Sim: 99.59%
|
XP_018937409.1 teneurin-4-like |
GO:0007157P:heterophilic cell-cell adhesion GO:0007165P:signal transduction GO:0048666P:neuron development GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0043005C:neuron projection |
Other
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SRR953582_primary_scf7180001950739_1-1753
Len: 1,752 bp
Hits: 20
E-val: 5.60E-136
Sim: 62.77%
|
XP_018964502.1 LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 3-like |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0007409P:axonogenesis GO:0021510P:spinal cord development GO:0039021P:pronephric glomerulus development |
Cell Signaling
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SRR953582_primary_scf7180001950774_1-2839
Len: 2,838 bp
Hits: 20
E-val: 2.90E-41
Sim: 58.22%
|
XP_005163506.1E3 ubiquitin-protein ligase MARCH6 isoform X1 |
GO:0036503P:ERAD pathway GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005789C:endoplasmic reticulum membrane GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001950792_350-1381
Len: 1,031 bp
Hits: 20
E-val: 8.30E-196
Sim: 97.56%
|
XP_018957328.1 protein FAM46A-like |
GO:0048255P:mRNA stabilization GO:0003723F:RNA binding GO:1990817F:poly(A) RNA polymerase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180001950796_1101-1511
Len: 410 bp
Hits: 20
E-val: 1.00E-64
Sim: 92.5%
|
XP_016404206.1 gastrin-releasing peptide receptor-like |
GO:0007218P:neuropeptide signaling pathway GO:0008188F:neuropeptide receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001950870_1874-2322
Len: 448 bp
Hits: 20
E-val: 2.60E-45
Sim: 99.43%
|
XP_016355503.1 serine/threonine-protein kinase N2-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035556P:intracellular signal transduction GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0031267F:small GTPase binding GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030496C:midbody GO:0032154C:cleavage furrow |
Signal Transduction
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SRR953582_primary_scf7180001950895_1872-2705
Len: 833 bp
Hits: 14
E-val: 1.70E-13
Sim: 89.15%
|
XP_016122563.1 inosine triphosphate pyrophosphatase-like |
GO:0009117P:nucleotide metabolic process GO:0009204P:deoxyribonucleoside triphosphate catabolic process GO:0000166F:nucleotide binding GO:0035870F:dITP diphosphatase activity GO:0036220F:ITP diphosphatase activity GO:0036222F:XTP diphosphatase activity GO:0046872F:metal ion binding GO:0106379F:8-oxo-(d)RTP hydrolase activity GO:0005737C:cytoplasm |
Metabolism
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SRR953582_primary_scf7180001950897_1416-1712
Len: 296 bp
Hits: 20
E-val: 1.30E-29
Sim: 77.72%
|
XP_016332538.1 aryl-hydrocarbon-interacting protein-like 1 |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180001950946_538-1405
Len: 867 bp
Hits: 20
E-val: 4.30E-52
Sim: 81.93%
|
XP_018950331.1 DNA polymerase theta-like isoform X1 |
GO:0006261P:DNA-templated DNA replication GO:0071897P:DNA biosynthetic process GO:0097681P:double-strand break repair via alternative nonhomologous end joining GO:0003677F:DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0005524F:ATP binding |
DNA Metabolism
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SRR953582_primary_scf7180001950966_136-3127
Len: 2,991 bp
Hits: 20
E-val: 4.30E-19
Sim: 92.76%
|
XP_016389233.1 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like |
GO:0007601P:visual perception GO:0045742P:positive regulation of epidermal growth factor receptor signaling pathway GO:0045745P:positive regulation of G protein-coupled receptor signaling pathway GO:0004117F:calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity GO:0030553F:cGMP binding GO:0048101F:calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity GO:0042622C:photoreceptor outer segment membrane |
Cell Signaling
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SRR953582_primary_scf7180001951012_1003-2764
Len: 1,761 bp
Hits: 20
E-val: 1.40E-46
Sim: 73.77%
|
XP_018956787.1 LOW QUALITY PROTEIN: dynactin subunit 1-like |
GO:0051649P:establishment of localization in cell GO:0051656P:establishment of organelle localization GO:0005819C:spindle GO:0005875C:microtubule associated complex GO:0099080C:supramolecular complex |
Other
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SRR953582_primary_scf7180001951078_1-3105
Len: 3,104 bp
Hits: 20
E-val: 5.30E-246
Sim: 75.43%
|
XP_018968730.1 DNA cross-link repair 1A protein isoform X1 |
GO:0006303P:double-strand break repair via nonhomologous end joining GO:0036297P:interstrand cross-link repair GO:0003684F:damaged DNA binding GO:0008270F:zinc ion binding GO:0035312F:5'-3' DNA exonuclease activity GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180001951100_1-3528
Len: 3,527 bp
Hits: 20
E-val: 9.20E-37
Sim: 75.01%
|
XP_016111302.1 ephrin type-B receptor 3-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite |
Signal Transduction
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SRR953582_primary_scf7180001951172_1-2006
Len: 2,005 bp
Hits: 20
E-val: 1.70E-11
Sim: 90.04%
|
XP_018954352.1 LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like |
GO:0016042P:lipid catabolic process GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity GO:0005509F:calcium ion binding |
Cell Signaling
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SRR953582_primary_scf7180001951188_1-2482
Len: 2,481 bp
Hits: 20
E-val: 3.10E-23
Sim: 52.76%
|
XP_017539872.1 exocyst complex component 6 isoform X1 |
GO:0006886P:intracellular protein transport GO:0006887P:exocytosis GO:0006893P:Golgi to plasma membrane transport GO:0090522P:vesicle tethering involved in exocytosis GO:0003674F:molecular_function GO:0000145C:exocyst GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001951189_248-1948
Len: 1,700 bp
Hits: 20
E-val: 2.40E-46
Sim: 52.25%
|
XP_016422672.1 lysine-specific demethylase 5B-B-like isoform X1 |
GO:0006325P:chromatin organization GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0051213F:dioxygenase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001951219_1-2059
Len: 2,058 bp
Hits: 20
E-val: 2.20E-147
Sim: 91.96%
|
XP_018934264.1 protein O-mannose kinase-like |
GO:0006493P:protein O-linked glycosylation GO:0036268P:swimming GO:0046835P:carbohydrate phosphorylation GO:0061061P:muscle structure development GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0019200F:carbohydrate kinase activity GO:0030247F:polysaccharide binding GO:0043531F:ADP binding GO:0005789C:endoplasmic reticulum membrane |
Signal Transduction
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SRR953582_primary_scf7180001951221_1-2818
Len: 2,817 bp
Hits: 20
E-val: 9.90E-50
Sim: 61.73%
|
XP_018948133.1 stabilin-1-like |
GO:0034383P:low-density lipoprotein particle clearance GO:0042632P:cholesterol homeostasis GO:0090118P:receptor-mediated endocytosis involved in cholesterol transport GO:0150024P:oxidised low-density lipoprotein particle clearance GO:1901492P:positive regulation of lymphangiogenesis GO:0005044F:scavenger receptor activity |
Cell Signaling
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SRR953582_primary_scf7180001951234_1-2136
Len: 2,135 bp
Hits: 20
E-val: 2.80E-97
Sim: 84.79%
|
XP_018958401.1 LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 2-like |
GO:0051693P:actin filament capping GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0005543F:phospholipid binding GO:0008091C:spectrin GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001951248_315-3213
Len: 2,898 bp
Hits: 20
E-val: 4.10E-67
Sim: 61.87%
|
ROI84199.1Leucine-rich repeats and immunoglobulin-like domains protein 1 |
GO:0005886C:plasma membrane GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180001951337_1457-2499
Len: 1,042 bp
Hits: 20
E-val: 8.50E-39
Sim: 59.2%
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XP_018948380.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 |
DNA Metabolism
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SRR953582_primary_scf7180001951351_1-2515
Len: 2,514 bp
Hits: 20
E-val: 1.40E-34
Sim: 83.38%
|
XP_026089564.1serine palmitoyltransferase 2-like |
GO:0046512P:sphingosine biosynthetic process GO:0046513P:ceramide biosynthetic process GO:0004758F:serine C-palmitoyltransferase activity GO:0030170F:pyridoxal phosphate binding GO:0016020C:membrane GO:0017059C:serine palmitoyltransferase complex |
Other
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SRR953582_primary_scf7180001951450_1267-2281
Len: 1,014 bp
Hits: 20
E-val: 1.10E-72
Sim: 90.39%
|
XP_018978356.1 complement C1q-like protein 2 |
GO:0099558P:maintenance of synapse structure GO:0016787F:hydrolase activity GO:0005576C:extracellular region GO:0005581C:collagen trimer GO:0045202C:synapse |
Other
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SRR953582_primary_scf7180001951512_872-2320
Len: 1,448 bp
Hits: 20
E-val: 8.80E-252
Sim: 95.49%
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XP_018955793.1 LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001951580_1-1773
Len: 1,772 bp
Hits: 20
E-val: 7.90E-61
Sim: 92.67%
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XP_016319625.1 palmitoleoyl-protein carboxylesterase notum1a-like |
GO:0009952P:anterior/posterior pattern specification GO:0021532P:neural tube patterning GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:1990697P:protein depalmitoleylation GO:0004621F:glycosylphosphatidylinositol phospholipase D activity GO:1990699F:palmitoleyl hydrolase activity GO:0005576C:extracellular region |
Cell Signaling
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