Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180001964393_1781-2137
Len: 356 bp
Hits: 20
E-val: 1.90E-38
Sim: 75.03%
|
XP_026099515.1fructose-1,6-bisphosphatase 1-like |
GO:0006000P:fructose metabolic process GO:0006002P:fructose 6-phosphate metabolic process GO:0006094P:gluconeogenesis GO:0030388P:fructose 1,6-bisphosphate metabolic process GO:0071391P:cellular response to estrogen stimulus GO:0042132F:fructose 1,6-bisphosphate 1-phosphatase activity GO:0005829C:cytosol |
Metabolism
|
|
SRR953582_primary_scf7180001964399_726-1263
Len: 537 bp
Hits: 20
E-val: 2.30E-72
Sim: 94.03%
|
XP_018974914.1 T-cell leukemia homeobox protein 1-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048536P:spleen development GO:0050776P:regulation of immune response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001964495_1-945
Len: 944 bp
Hits: 20
E-val: 9.10E-141
Sim: 93.8%
|
XP_018966027.1 leucine-rich repeat transmembrane neuronal protein 1-like isoform X2 |
GO:0042802F:identical protein binding GO:0005615C:extracellular space GO:0016020C:membrane GO:0031012C:extracellular matrix |
Other
|
|
SRR953582_primary_scf7180001964661_1-1426
Len: 1,425 bp
Hits: 20
E-val: 1.40E-36
Sim: 63.14%
|
AJP77390.1JAK2 |
GO:0007166P:cell surface receptor signaling pathway GO:0042221P:response to chemical GO:0004713F:protein tyrosine kinase activity GO:0005515F:protein binding GO:0005622C:intracellular anatomical structure |
Signal Transduction
|
|
SRR953582_primary_scf7180001964724_580-1588
Len: 1,008 bp
Hits: 20
E-val: 1.30E-39
Sim: 93.43%
|
XP_018976070.1 paired box protein Pax-9-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045658P:regulation of neutrophil differentiation GO:0050830P:defense response to Gram-positive bacterium GO:0060021P:roof of mouth development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001964731_1-1717
Len: 1,716 bp
Hits: 20
E-val: 1.50E-40
Sim: 91.89%
|
XP_016367868.1 protein groucho-1-like, partial |
GO:0045892P:negative regulation of DNA-templated transcription GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0003714F:transcription corepressor activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Cell Signaling
|
|
SRR953582_primary_scf7180001964736_1164-1815
Len: 651 bp
Hits: 20
E-val: 1.10E-33
Sim: 97.28%
|
XP_018968119.1 dual specificity protein phosphatase 13-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043409P:negative regulation of MAPK cascade GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008138F:protein tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
|
|
SRR953582_primary_scf7180001964758_1-528
Len: 527 bp
Hits: 20
E-val: 2.30E-64
Sim: 83.05%
|
XP_018981452.1 PR domain zinc finger protein 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
|
|
SRR953582_primary_scf7180001964779_1-1670
Len: 1,669 bp
Hits: 20
E-val: 5.00E-33
Sim: 98.49%
|
XP_018974333.1 protein transport protein Sec23A-like |
GO:0006605P:protein targeting GO:0006886P:intracellular protein transport GO:0035138P:pectoral fin morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0051216P:cartilage development GO:0090110P:COPII-coated vesicle cargo loading GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005789C:endoplasmic reticulum membrane GO:0005829C:cytosol GO:0030127C:COPII vesicle coat GO:0070971C:endoplasmic reticulum exit site |
Other
|
|
SRR953582_primary_scf7180001964786_472-1929
Len: 1,457 bp
Hits: 20
E-val: 2.30E-26
Sim: 92.15%
|
XP_018953162.1 nuclear pore complex protein Nup88-like |
GO:0000055P:ribosomal large subunit export from nucleus GO:0000056P:ribosomal small subunit export from nucleus GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:0017056F:structural constituent of nuclear pore GO:0005643C:nuclear pore |
Other
|
|
SRR953582_primary_scf7180001964820_1-1167
Len: 1,166 bp
Hits: 20
E-val: 6.60E-48
Sim: 54.94%
|
XP_018933551.1 LOW QUALITY PROTEIN: liprin-alpha-2-like, partial |
GO:0050808P:synapse organization GO:0003674F:molecular_function GO:0005737C:cytoplasm GO:0048786C:presynaptic active zone |
Other
|
|
SRR953582_primary_scf7180001964894_601-1736
Len: 1,135 bp
Hits: 20
E-val: 3.30E-161
Sim: 98.29%
|
XP_016402990.1 potassium voltage-gated channel subfamily C member 2-like, partial |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
Ion Transport
|
|
SRR953582_primary_scf7180001964922_1-1650
Len: 1,649 bp
Hits: 20
E-val: 6.00E-55
Sim: 96.62%
|
XP_016350164.1 serine/threonine-protein kinase D1-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0045765P:regulation of angiogenesis GO:1901490P:regulation of lymphangiogenesis GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
|
|
SRR953582_primary_scf7180001964952_1-1852
Len: 1,851 bp
Hits: 20
E-val: 3.50E-59
Sim: 80.66%
|
XP_026125845.1aminopeptidase O isoform X1 |
Protein Degradation
|
|
|
SRR953582_primary_scf7180001964954_1-1868
Len: 1,867 bp
Hits: 20
E-val: 5.70E-70
Sim: 87.33%
|
XP_026112606.1bromodomain and WD repeat-containing protein 3-like isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007010P:cytoskeleton organization GO:0008360P:regulation of cell shape GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001964968_411-762
Len: 351 bp
Hits: 20
E-val: 1.40E-33
Sim: 90.31%
|
XP_018952743.1 serine/threonine-protein phosphatase 5-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0046872F:metal ion binding GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Signal Transduction
|
|
SRR953582_primary_scf7180001965085_1-1251
Len: 1,250 bp
Hits: 20
E-val: 4.70E-52
Sim: 60.93%
|
XP_016417900.1 long-chain-fatty-acid--CoA ligase 4-like |
GO:0009987P:cellular process GO:0051216P:cartilage development |
Other
|
|
SRR953582_primary_scf7180001965161_1-2131
Len: 2,130 bp
Hits: 20
E-val: 3.10E-35
Sim: 97.73%
|
XP_018957864.1 LOW QUALITY PROTEIN: spondin-1-like, partial |
GO:0007155P:cell adhesion GO:0010954P:positive regulation of protein processing GO:1902430P:negative regulation of amyloid-beta formation GO:1902993P:positive regulation of amyloid precursor protein catabolic process GO:0046872F:metal ion binding GO:0050693F:LBD domain binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
Other
|
|
SRR953582_primary_scf7180001965220_1-1025
Len: 1,024 bp
Hits: 20
E-val: 1.50E-35
Sim: 68.29%
|
XP_016132126.1 28S ribosomal protein S15, mitochondrial-like |
GO:0006412P:translation GO:0003735F:structural constituent of ribosome GO:0005763C:mitochondrial small ribosomal subunit |
Other
|
|
SRR953582_primary_scf7180001965358_1-1683
Len: 1,682 bp
Hits: 20
E-val: 3.40E-207
Sim: 92%
|
XP_018944143.1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 |
GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0043130F:ubiquitin binding GO:0070062C:extracellular exosome |
Signal Transduction
|
|
SRR953582_primary_scf7180001965379_469-2303
Len: 1,834 bp
Hits: 20
E-val: 7.20E-41
Sim: 70.22%
|
RXN28674.1very low-density lipo receptor-like isoform X1 |
GO:0006898P:receptor-mediated endocytosis GO:0003824F:catalytic activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
|
|
SRR953582_primary_scf7180001965384_1406-1807
Len: 401 bp
Hits: 20
E-val: 4.40E-44
Sim: 84.63%
|
XP_018937805.1 transcription cofactor vestigial-like protein 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180001965486_1-1287
Len: 1,286 bp
Hits: 20
E-val: 1.40E-27
Sim: 66.63%
|
XP_016098499.1 transforming growth factor beta-2-like |
GO:0050794P:regulation of cellular process GO:0048018F:receptor ligand activity GO:0005576C:extracellular region |
Cell Signaling
|
|
SRR953582_primary_scf7180001965561_1-1379
Len: 1,378 bp
Hits: 20
E-val: 1.50E-19
Sim: 94.45%
|
RXN38299.1V-type proton ATPase subunit kidney isoform |
GO:0007035P:vacuolar acidification GO:0046034P:ATP metabolic process GO:1902600P:proton transmembrane transport GO:0005524F:ATP binding GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0016324C:apical plasma membrane GO:0030665C:clathrin-coated vesicle membrane GO:0030672C:synaptic vesicle membrane GO:0033180C:proton-transporting V-type ATPase, V1 domain GO:0042470C:melanosome |
Membrane Transport
|
|
SRR953582_primary_scf7180001965569_120-2013
Len: 1,893 bp
Hits: 20
E-val: 1.10E-20
Sim: 69.47%
|
XP_016119874.1 microfibrillar-associated protein 1-like, partial |
GO:0000398P:mRNA splicing, via spliceosome GO:0001527C:microfibril GO:0005654C:nucleoplasm GO:0005813C:centrosome GO:0071005C:U2-type precatalytic spliceosome |
Other
|