Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180001967224_1-486
Len: 485 bp
Hits: 20
E-val: 6.10E-16
Sim: 84.77%
|
XP_018973244.1 progressive ankylosis protein homolog B-like |
GO:0030500P:regulation of bone mineralization GO:0030505P:inorganic diphosphate transport GO:0035435P:phosphate ion transmembrane transport GO:0005315F:phosphate transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180001967233_611-2067
Len: 1,456 bp
Hits: 20
E-val: 9.70E-25
Sim: 90.88%
|
ROI15854.1THO complex subunit 2 |
GO:0006397P:mRNA processing GO:0006406P:mRNA export from nucleus GO:0003729F:mRNA binding GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR953582_primary_scf7180001967273_1-952
Len: 951 bp
Hits: 20
E-val: 1.20E-44
Sim: 99.8%
|
XP_016114610.1 guanylate cyclase soluble subunit beta-1-like |
GO:0006182P:cGMP biosynthetic process GO:0035556P:intracellular signal transduction GO:0070482P:response to oxygen levels GO:0004383F:guanylate cyclase activity GO:0005504F:fatty acid binding GO:0005525F:GTP binding GO:0020037F:heme binding GO:0008074C:guanylate cyclase complex, soluble |
Other
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SRR953582_primary_scf7180001967358_1-1618
Len: 1,617 bp
Hits: 20
E-val: 1.50E-18
Sim: 85.63%
|
XP_026116559.1voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X2 |
GO:0035725P:sodium ion transmembrane transport GO:0045956P:positive regulation of calcium ion-dependent exocytosis GO:0070509P:calcium ion import GO:0070588P:calcium ion transmembrane transport GO:0086010P:membrane depolarization during action potential GO:0005248F:voltage-gated sodium channel activity GO:0008332F:low voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0001518C:voltage-gated sodium channel complex GO:0005891C:voltage-gated calcium channel complex GO:0043005C:neuron projection |
Ion Transport
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SRR953582_primary_scf7180001967360_421-2075
Len: 1,654 bp
Hits: 20
E-val: 1.70E-25
Sim: 96.82%
|
XP_024263948.1LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like, partial |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0000976F:transcription cis-regulatory region binding GO:0003682F:chromatin binding GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180001967401_655-1547
Len: 892 bp
Hits: 20
E-val: 8.10E-131
Sim: 99.42%
|
RXN29612.1neuroligin-3-like protein |
GO:0007158P:neuron cell-cell adhesion GO:0048488P:synaptic vesicle endocytosis GO:0050804P:modulation of chemical synaptic transmission GO:0097104P:postsynaptic membrane assembly GO:0097105P:presynaptic membrane assembly GO:0038023F:signaling receptor activity GO:0042043F:neurexin family protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098793C:presynapse |
Cell Signaling
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SRR953582_primary_scf7180001967583_1-834
Len: 833 bp
Hits: 20
E-val: 2.40E-28
Sim: 89.8%
|
XP_018945882.1 elongation of very long chain fatty acids protein 4-like, partial |
GO:0006636P:unsaturated fatty acid biosynthetic process GO:0019367P:fatty acid elongation, saturated fatty acid GO:0030148P:sphingolipid biosynthetic process GO:0034625P:fatty acid elongation, monounsaturated fatty acid GO:0034626P:fatty acid elongation, polyunsaturated fatty acid GO:0035338P:long-chain fatty-acyl-CoA biosynthetic process GO:0042761P:very long-chain fatty acid biosynthetic process GO:0009922F:fatty acid elongase activity GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR953582_primary_scf7180001967868_1-2164
Len: 2,163 bp
Hits: 20
E-val: 1.10E-27
Sim: 92.33%
|
ACP17905.1peroxisome proliferator activated receptor alpha, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0010887P:negative regulation of cholesterol storage GO:0030154P:cell differentiation GO:0030522P:intracellular receptor signaling pathway GO:0045923P:positive regulation of fatty acid metabolic process GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0050728P:negative regulation of inflammatory response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0008289F:lipid binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180001967963_431-1429
Len: 998 bp
Hits: 20
E-val: 2.80E-180
Sim: 96.25%
|
XP_018971538.1 G-protein coupled receptor 6-like |
GO:0003376P:sphingosine-1-phosphate receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0019222P:regulation of metabolic process GO:0038036F:sphingosine-1-phosphate receptor activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001968032_1-1637
Len: 1,636 bp
Hits: 20
E-val: 4.20E-16
Sim: 90%
|
XP_003966774.1 rap1 GTPase-GDP dissociation stimulator 1 isoform X1 |
GO:0048513P:animal organ development GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005739C:mitochondrion GO:0005783C:endoplasmic reticulum GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180001968070_172-1371
Len: 1,199 bp
Hits: 20
E-val: 1.00E-27
Sim: 58.6%
|
XP_018953430.1 protein tyrosine phosphatase domain-containing protein 1-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0060271P:cilium assembly GO:0004725F:protein tyrosine phosphatase activity GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0012505C:endomembrane system GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180001968071_1-2431
Len: 2,430 bp
Hits: 20
E-val: 6.10E-56
Sim: 69.39%
|
XP_018940971.1 low-density lipoprotein receptor-related protein 2-like |
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0048259P:regulation of receptor-mediated endocytosis GO:0070293P:renal absorption GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180001968100_752-1539
Len: 787 bp
Hits: 20
E-val: 3.90E-52
Sim: 77.65%
|
XP_018980272.1 apolipoprotein A-IV-like |
GO:0008203P:cholesterol metabolic process GO:0033344P:cholesterol efflux GO:0033700P:phospholipid efflux GO:0042157P:lipoprotein metabolic process GO:0055090P:acylglycerol homeostasis GO:0005543F:phospholipid binding GO:0060228F:phosphatidylcholine-sterol O-acyltransferase activator activity GO:0120020F:cholesterol transfer activity GO:0034361C:very-low-density lipoprotein particle GO:0034362C:low-density lipoprotein particle GO:0034364C:high-density lipoprotein particle GO:0042627C:chylomicron GO:1903561C:extracellular vesicle |
Metabolism
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SRR953582_primary_scf7180001968106_1-2238
Len: 2,237 bp
Hits: 20
E-val: 3.90E-33
Sim: 81.95%
|
XP_016150888.1 excitatory amino acid transporter 5-like |
GO:0015804P:neutral amino acid transport GO:0015813P:L-glutamate transmembrane transport GO:0005313F:L-glutamate transmembrane transporter activity GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015501F:glutamate:sodium symporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180001968223_866-1504
Len: 638 bp
Hits: 20
E-val: 5.00E-18
Sim: 73.06%
|
RXN12459.1E3 ubiquitin-protein ligase RNF115-like protein |
GO:0007368P:determination of left/right symmetry GO:0016567P:protein ubiquitination GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180001968332_1-1554
Len: 1,553 bp
Hits: 20
E-val: 1.50E-15
Sim: 72.63%
|
XP_005160063.1storkhead-box protein 2 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180001968336_1-1575
Len: 1,574 bp
Hits: 20
E-val: 6.80E-40
Sim: 94.15%
|
XP_026095017.1insulin gene enhancer protein isl-2a-like isoform X4 |
GO:0003139P:secondary heart field specification GO:0007409P:axonogenesis GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048665P:neuron fate specification GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180001968380_1-1328
Len: 1,327 bp
Hits: 20
E-val: 5.90E-29
Sim: 68.59%
|
XP_026145512.1NAD(P)H-hydrate epimerase |
Other
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SRR953582_primary_scf7180001968429_1536-1948
Len: 412 bp
Hits: 20
E-val: 3.30E-18
Sim: 92.73%
|
XP_018929154.1 protein S100-A1 |
GO:0002224P:toll-like receptor signaling pathway GO:0006954P:inflammatory response GO:0008016P:regulation of heart contraction GO:0005509F:calcium ion binding GO:0038023F:signaling receptor activity GO:0048306F:calcium-dependent protein binding GO:0005739C:mitochondrion GO:0005886C:plasma membrane GO:0016529C:sarcoplasmic reticulum |
Cell Signaling
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SRR953582_primary_scf7180001968505_853-2102
Len: 1,249 bp
Hits: 20
E-val: 4.60E-31
Sim: 98.08%
|
XP_018979034.1 protein-methionine sulfoxide oxidase mical2-like |
GO:0006887P:exocytosis GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR953582_primary_scf7180001968797_1-1138
Len: 1,137 bp
Hits: 20
E-val: 2.10E-115
Sim: 95.15%
|
XP_016402025.1 high affinity choline transporter 1-like |
GO:0006814P:sodium ion transport GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008292P:acetylcholine biosynthetic process GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0015871P:choline transport GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0055085P:transmembrane transport GO:0003924F:GTPase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005307F:choline:sodium symporter activity GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0030425C:dendrite GO:0043204C:perikaryon GO:0045202C:synapse |
Signal Transduction
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SRR953582_primary_scf7180001968969_1-1075
Len: 1,074 bp
Hits: 20
E-val: 6.30E-21
Sim: 99.71%
|
XP_018943135.1 semaphorin-6D-like |
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001755P:neural crest cell migration GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180001969233_14-798
Len: 784 bp
Hits: 20
E-val: 9.80E-48
Sim: 79.16%
|
ROI81838.1E3 ubiquitin-protein ligase BRE1B |
GO:0006325P:chromatin organization GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0033503C:HULC complex |
DNA Metabolism
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SRR953582_primary_scf7180001969340_1-1834
Len: 1,833 bp
Hits: 20
E-val: 1.30E-34
Sim: 100%
|
ROI47880.1Huntingtin |
GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180001969407_796-1172
Len: 376 bp
Hits: 20
E-val: 9.90E-14
Sim: 65.32%
|
CAG07044.1unnamed protein product, partial |
GO:0016192P:vesicle-mediated transport GO:0005044F:scavenger receptor activity GO:0005509F:calcium ion binding GO:0016020C:membrane |
Cell Signaling
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