Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002004511_413-3301
Len: 2,888 bp
Hits: 20
E-val: 0
Sim: 89.67%
|
XP_018934692.1 LOW QUALITY PROTEIN: protocadherin Fat 1-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0005911C:cell-cell junction |
Other
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SRR953582_primary_scf7180002004516_1-917
Len: 916 bp
Hits: 20
E-val: 4.00E-16
Sim: 97.05%
|
XP_018965719.1 LOW QUALITY PROTEIN: THAP domain-containing protein 1-like |
GO:0001935P:endothelial cell proliferation GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002004521_1948-5646
Len: 3,698 bp
Hits: 20
E-val: 3.80E-166
Sim: 79.92%
|
XP_016299745.1 leiomodin-2-like |
GO:0006936P:muscle contraction GO:0030239P:myofibril assembly GO:0051694P:pointed-end actin filament capping GO:0003779F:actin binding GO:0005523F:tropomyosin binding GO:0005865C:striated muscle thin filament |
Other
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SRR953582_primary_scf7180002004539_269-2926
Len: 2,657 bp
Hits: 20
E-val: 4.10E-45
Sim: 52.15%
|
XP_018944036.1 LOW QUALITY PROTEIN: stabilin-1-like |
GO:0007155P:cell adhesion GO:0034383P:low-density lipoprotein particle clearance GO:0042632P:cholesterol homeostasis GO:0090118P:receptor-mediated endocytosis involved in cholesterol transport GO:0150024P:oxidised low-density lipoprotein particle clearance GO:1901492P:positive regulation of lymphangiogenesis GO:0005044F:scavenger receptor activity GO:0005509F:calcium ion binding GO:0005540F:hyaluronic acid binding GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002004566_1-3472
Len: 3,471 bp
Hits: 20
E-val: 6.20E-102
Sim: 62.91%
|
XP_007245126.1E3 ubiquitin-protein ligase RING2 isoform X1 |
GO:0003161P:cardiac conduction system development GO:0007417P:central nervous system development GO:0010468P:regulation of gene expression GO:0032330P:regulation of chondrocyte differentiation GO:0033339P:pectoral fin development GO:0048484P:enteric nervous system development GO:0048701P:embryonic cranial skeleton morphogenesis GO:0060042P:retina morphogenesis in camera-type eye GO:1902254P:negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator GO:1905295P:regulation of neural crest cell fate specification GO:1905304P:regulation of cardiac myofibril assembly GO:0005488F:binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0031519C:PcG protein complex |
Cell Signaling
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SRR953582_primary_scf7180002004568_3342-4075
Len: 733 bp
Hits: 20
E-val: 1.90E-45
Sim: 83.71%
|
RXN20266.1spliceosome RNA helicase DDX39B |
GO:0000398P:mRNA splicing, via spliceosome GO:0006406P:mRNA export from nucleus GO:0003724F:RNA helicase activity GO:0003729F:mRNA binding GO:0005524F:ATP binding GO:0016787F:hydrolase activity |
DNA Metabolism
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SRR953582_primary_scf7180002004615_1543-4569
Len: 3,026 bp
Hits: 20
E-val: 4.00E-238
Sim: 51.13%
|
XP_026114017.1adenylate cyclase type 8-like isoform X3 |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0016829F:lyase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002004620_713-3694
Len: 2,981 bp
Hits: 20
E-val: 0
Sim: 75.65%
|
XP_018965139.1 zinc finger protein 804A-like |
GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR953582_primary_scf7180002004647_3163-5247
Len: 2,084 bp
Hits: 20
E-val: 3.50E-185
Sim: 54.27%
|
XP_018930492.1 protein FAM46A-like |
GO:0048255P:mRNA stabilization GO:0003723F:RNA binding GO:1990817F:poly(A) RNA polymerase activity GO:0005575C:cellular_component GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002004662_200-2128
Len: 1,928 bp
Hits: 20
E-val: 5.20E-135
Sim: 92.82%
|
XP_018936251.1 mitochondrial ubiquitin ligase activator of nfkb 1-A |
GO:0000266P:mitochondrial fission GO:0016567P:protein ubiquitination GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0051646P:mitochondrion localization GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042802F:identical protein binding GO:0061630F:ubiquitin protein ligase activity GO:0005741C:mitochondrial outer membrane GO:0005777C:peroxisome |
DNA Metabolism
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SRR953582_primary_scf7180002004756_1-5077
Len: 5,076 bp
Hits: 20
E-val: 8.10E-34
Sim: 65.52%
|
XP_016103264.1 sodium/potassium-transporting ATPase subunit beta-3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006883P:intracellular sodium ion homeostasis GO:0030007P:intracellular potassium ion homeostasis GO:0036376P:sodium ion export across plasma membrane GO:0051726P:regulation of cell cycle GO:1990573P:potassium ion import across plasma membrane GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001671F:ATPase activator activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005890C:sodium:potassium-exchanging ATPase complex |
Transcription Regulation
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SRR953582_primary_scf7180002004774_1-3610
Len: 3,609 bp
Hits: 20
E-val: 9.10E-56
Sim: 72.49%
|
XP_018929825.1 sodium-dependent neutral amino acid transporter B(0)AT1-like |
GO:0006810P:transport GO:0022857F:transmembrane transporter activity GO:0016324C:apical plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002004782_1-2804
Len: 2,803 bp
Hits: 20
E-val: 5.80E-66
Sim: 99.27%
|
XP_018934305.1 neurocalcin-delta B-like isoform X2 |
GO:0003073P:regulation of systemic arterial blood pressure GO:0009966P:regulation of signal transduction GO:0019722P:calcium-mediated signaling GO:0048841P:regulation of axon extension involved in axon guidance GO:0003779F:actin binding GO:0005509F:calcium ion binding GO:0030276F:clathrin binding GO:0043014F:alpha-tubulin binding GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002004829_1-972
Len: 971 bp
Hits: 20
E-val: 2.90E-25
Sim: 99.52%
|
RXN10893.1LIM domain kinase 1-like isoform X2 |
GO:0001878P:response to yeast GO:0006338P:chromatin remodeling GO:0051496P:positive regulation of stress fiber assembly GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0046872F:metal ion binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0043005C:neuron projection |
Signal Transduction
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SRR953582_primary_scf7180002004939_1429-5007
Len: 3,578 bp
Hits: 20
E-val: 0
Sim: 89.05%
|
XP_018980297.1 LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1-like |
GO:0003677F:DNA binding GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002004953_1045-3363
Len: 2,318 bp
Hits: 20
E-val: 8.20E-26
Sim: 91.57%
|
XP_016332472.1 heterogeneous nuclear ribonucleoprotein H-like isoform X4 |
GO:0043484P:regulation of RNA splicing GO:0003723F:RNA binding GO:0005654C:nucleoplasm GO:1990904C:ribonucleoprotein complex |
Other
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SRR953582_primary_scf7180002004957_1-4057
Len: 4,056 bp
Hits: 20
E-val: 6.70E-124
Sim: 83.03%
|
XP_018935781.1 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD2-like |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0046975F:histone H3K36 methyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome |
Transcription Regulation
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SRR953582_primary_scf7180002004984_739-2785
Len: 2,046 bp
Hits: 20
E-val: 4.20E-82
Sim: 93.54%
|
XP_018969260.1 ras-like protein family member 11B |
Other
|
|
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SRR953582_primary_scf7180002005032_532-3653
Len: 3,121 bp
Hits: 20
E-val: 3.10E-28
Sim: 99.93%
|
XP_026085680.1plexin-A4 |
GO:0001763P:morphogenesis of a branching structure GO:0007411P:axon guidance GO:0007414P:axonal defasciculation GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002005066_2594-3474
Len: 880 bp
Hits: 20
E-val: 4.00E-50
Sim: 94.23%
|
XP_016321476.1 spectrin beta chain, non-erythrocytic 4-like |
GO:0051693P:actin filament capping GO:0005543F:phospholipid binding GO:0051015F:actin filament binding GO:0005886C:plasma membrane GO:0030054C:cell junction GO:0030864C:cortical actin cytoskeleton GO:0042995C:cell projection |
Other
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SRR953582_primary_scf7180002005073_1-4935
Len: 4,934 bp
Hits: 20
E-val: 7.60E-239
Sim: 54.84%
|
XP_016342799.1 myopalladin-like isoform X3 |
GO:0003676F:nucleic acid binding GO:0004672F:protein kinase activity |
Signal Transduction
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SRR953582_primary_scf7180002005079_1-4114
Len: 4,113 bp
Hits: 20
E-val: 3.50E-43
Sim: 91.98%
|
XP_018930533.1 lysyl oxidase homolog 2A-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001666P:response to hypoxia GO:0001935P:endothelial cell proliferation GO:0002040P:sprouting angiogenesis GO:0010718P:positive regulation of epithelial to mesenchymal transition GO:0018057P:peptidyl-lysine oxidation GO:0030199P:collagen fibril organization GO:0032332P:positive regulation of chondrocyte differentiation GO:0043542P:endothelial cell migration GO:0070828P:heterochromatin organization GO:1902455P:negative regulation of stem cell population maintenance GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005509F:calcium ion binding GO:0000785C:chromatin GO:0005604C:basement membrane GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002005121_501-2069
Len: 1,568 bp
Hits: 20
E-val: 8.70E-306
Sim: 96.56%
|
XP_018954145.1 dual specificity tyrosine-phosphorylation-regulated kinase 2-like isoform X1 |
GO:0035617P:stress granule disassembly GO:0055001P:muscle cell development GO:1902751P:positive regulation of cell cycle G2/M phase transition GO:0004674F:protein serine/threonine kinase activity GO:0004712F:protein serine/threonine/tyrosine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Signal Transduction
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SRR953582_primary_scf7180002005187_1-5333
Len: 5,332 bp
Hits: 20
E-val: 8.90E-108
Sim: 93.96%
|
XP_018978286.1 transmembrane and TPR repeat-containing protein 2-like |
GO:0035269P:protein O-linked glycosylation via mannose GO:0004169F:dolichyl-phosphate-mannose-protein mannosyltransferase activity GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR953582_primary_scf7180002005211_1213-3769
Len: 2,556 bp
Hits: 20
E-val: 1.60E-54
Sim: 89.82%
|
XP_026054950.1laminin subunit gamma-1-like |
GO:0001654P:eye development GO:0007519P:skeletal muscle tissue development GO:0007634P:optokinetic behavior GO:0031290P:retinal ganglion cell axon guidance GO:0048570P:notochord morphogenesis GO:0048854P:brain morphogenesis GO:0050908P:detection of light stimulus involved in visual perception GO:0061053P:somite development GO:0005604C:basement membrane |
Other
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