Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002010589_1-354
Len: 353 bp
Hits: 20
E-val: 3.50E-21
Sim: 98.2%
|
XP_026134556.1phenylalanine--tRNA ligase beta subunit-like |
GO:0006414P:translational elongation GO:0006432P:phenylalanyl-tRNA aminoacylation GO:0000287F:magnesium ion binding GO:0003723F:RNA binding GO:0003746F:translation elongation factor activity GO:0004826F:phenylalanine-tRNA ligase activity GO:0005524F:ATP binding GO:0009328C:phenylalanine-tRNA ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180002010595_991-1629
Len: 638 bp
Hits: 20
E-val: 5.10E-119
Sim: 95.35%
|
XP_018932319.1 sentrin-specific protease 8-like isoform X1 |
GO:0000338P:protein deneddylation GO:0006508P:proteolysis GO:0008234F:cysteine-type peptidase activity GO:0019784F:deNEDDylase activity |
Protein Degradation
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SRR953582_primary_scf7180002010625_1-2534
Len: 2,533 bp
Hits: 20
E-val: 9.90E-25
Sim: 88.04%
|
XP_016419793.1 G-protein-signaling modulator 2-like |
GO:0000132P:establishment of mitotic spindle orientation GO:0001965F:G-protein alpha-subunit binding GO:0005092F:GDP-dissociation inhibitor activity GO:0005886C:plasma membrane GO:0005938C:cell cortex |
Other
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SRR953582_primary_scf7180002010718_1-5564
Len: 5,563 bp
Hits: 20
E-val: 9.00E-79
Sim: 97.3%
|
XP_026131102.1transmembrane and coiled-coil domains protein 1-like isoform X1 |
GO:0012505C:endomembrane system GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002010783_1-2637
Len: 2,636 bp
Hits: 20
E-val: 1.10E-23
Sim: 90.17%
|
XP_016392499.1 LOW QUALITY PROTEIN: protein AF-10 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0031491F:nucleosome binding GO:0042393F:histone binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002010803_1-1972
Len: 1,971 bp
Hits: 20
E-val: 4.60E-102
Sim: 95.35%
|
XP_018981554.1 LOW QUALITY PROTEIN: cullin-9-like |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0031625F:ubiquitin protein ligase binding GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002010817_763-2199
Len: 1,436 bp
Hits: 20
E-val: 3.50E-35
Sim: 51.36%
|
AAY16261.1calmodulin, partial |
GO:0005515F:protein binding GO:0110165C:cellular anatomical structure |
Other
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SRR953582_primary_scf7180002010835_1-2708
Len: 2,707 bp
Hits: 20
E-val: 2.20E-46
Sim: 95.1%
|
XP_026128475.1integrin alpha-6-like isoform X2 |
GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0007519P:skeletal muscle tissue development GO:0033627P:cell adhesion mediated by integrin GO:0050900P:leukocyte migration GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0008305C:integrin complex GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002010872_230-2743
Len: 2,513 bp
Hits: 20
E-val: 2.30E-42
Sim: 61%
|
XP_018933896.1 RNA pseudouridylate synthase domain-containing protein 4-like |
GO:0016070P:RNA metabolic process GO:0009982F:pseudouridine synthase activity |
Metabolism
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SRR953582_primary_scf7180002010888_1-3198
Len: 3,197 bp
Hits: 20
E-val: 1.50E-25
Sim: 97.87%
|
XP_026096725.1RNA polymerase II subunit A C-terminal domain phosphatase-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus |
Signal Transduction
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SRR953582_primary_scf7180002010895_1-2787
Len: 2,786 bp
Hits: 20
E-val: 4.10E-96
Sim: 96.75%
|
ROL42644.1Zinc finger homeobox protein 4 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002010951_1211-3089
Len: 1,878 bp
Hits: 20
E-val: 4.80E-16
Sim: 99.09%
|
XP_017566381.1 peptidyl-prolyl cis-trans isomerase FKBP1A-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0033017C:sarcoplasmic reticulum membrane |
Transcription Regulation
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SRR953582_primary_scf7180002010966_1256-2540
Len: 1,284 bp
Hits: 20
E-val: 7.00E-35
Sim: 94.73%
|
XP_016087581.1 disks large homolog 3-like |
GO:0001736P:establishment of planar polarity GO:0007268P:chemical synaptic transmission GO:0007399P:nervous system development GO:0008285P:negative regulation of cell population proliferation GO:0035418P:protein localization to synapse GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0097120P:receptor localization to synapse GO:0098609P:cell-cell adhesion GO:0099072P:regulation of postsynaptic membrane neurotransmitter receptor levels GO:0019901F:protein kinase binding GO:0019902F:phosphatase binding GO:0031625F:ubiquitin protein ligase binding GO:0035255F:ionotropic glutamate receptor binding GO:0005829C:cytosol GO:0005912C:adherens junction GO:0005923C:bicellular tight junction GO:0016323C:basolateral plasma membrane GO:0031594C:neuromuscular junction GO:0032281C:AMPA glutamate receptor complex GO:0043005C:neuron projection GO:0098839C:postsynaptic density membrane GO:0098978C:glutamatergic synapse |
Signal Transduction
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SRR953582_primary_scf7180002010976_314-1042
Len: 728 bp
Hits: 20
E-val: 9.90E-119
Sim: 91.02%
|
XP_016341480.1 protocadherin-10-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002010981_1-3663
Len: 3,662 bp
Hits: 20
E-val: 2.30E-86
Sim: 90.76%
|
RXN24968.1zinc finger protein 711 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:1903706P:regulation of hemopoiesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0060388C:vitelline envelope |
Transcription Regulation
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SRR953582_primary_scf7180002011028_1-3513
Len: 3,512 bp
Hits: 20
E-val: 1.20E-36
Sim: 99.74%
|
XP_016426798.1 serine/threonine-protein kinase 40-like |
GO:0006338P:chromatin remodeling GO:0043408P:regulation of MAPK cascade GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002011042_1-3014
Len: 3,013 bp
Hits: 20
E-val: 1.40E-46
Sim: 64.61%
|
CAF89672.1unnamed protein product, partial |
GO:0016079P:synaptic vesicle exocytosis GO:0065003P:protein-containing complex assembly GO:0140029P:exocytic process GO:1990504P:dense core granule exocytosis GO:0005515F:protein binding GO:0008289F:lipid binding GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0098793C:presynapse |
Other
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SRR953582_primary_scf7180002011129_1-2248
Len: 2,247 bp
Hits: 20
E-val: 4.00E-17
Sim: 97.87%
|
XP_026106226.1mediator of RNA polymerase II transcription subunit 12-like isoform X3 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0016592C:mediator complex |
Transcription Regulation
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SRR953582_primary_scf7180002011251_3361-3954
Len: 593 bp
Hits: 20
E-val: 1.20E-95
Sim: 86.05%
|
XP_018973780.1 tektin-4-like |
GO:0060271P:cilium assembly GO:0060294P:cilium movement involved in cell motility GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0015630C:microtubule cytoskeleton GO:0036126C:sperm flagellum |
Other
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SRR953582_primary_scf7180002011361_1-4662
Len: 4,661 bp
Hits: 20
E-val: 1.80E-27
Sim: 85.74%
|
RXN21672.1exocyst complex component 6B-like isoform X1 |
GO:0006886P:intracellular protein transport GO:0006893P:Golgi to plasma membrane transport GO:0090522P:vesicle tethering involved in exocytosis GO:0000145C:exocyst GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002011374_1583-3043
Len: 1,460 bp
Hits: 20
E-val: 6.70E-58
Sim: 65.35%
|
XP_018979500.1 chromobox protein homolog 3-like isoform X1 |
DNA Metabolism
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SRR953582_primary_scf7180002011397_1-2432
Len: 2,431 bp
Hits: 20
E-val: 0
Sim: 95.75%
|
XP_018980534.1 LOW QUALITY PROTEIN: zinc finger protein 646-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002011399_1-2280
Len: 2,279 bp
Hits: 20
E-val: 2.20E-95
Sim: 97.99%
|
XP_018966122.1 protein Wnt-7a-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0060271P:cilium assembly GO:0004725F:protein tyrosine phosphatase activity GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0012505C:endomembrane system GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002011418_787-2517
Len: 1,730 bp
Hits: 20
E-val: 3.20E-59
Sim: 91.43%
|
XP_018930151.1 butyrophilin-like protein 3 isoform X1 |
GO:0001817P:regulation of cytokine production GO:0050852P:T cell receptor signaling pathway GO:0005102F:signaling receptor binding GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002011453_671-1943
Len: 1,272 bp
Hits: 20
E-val: 9.90E-74
Sim: 99.65%
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XP_018956158.1 Golgi phosphoprotein 3-like |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0007030P:Golgi organization GO:0043001P:Golgi to plasma membrane protein transport GO:0048194P:Golgi vesicle budding GO:0070273F:phosphatidylinositol-4-phosphate binding GO:0000139C:Golgi membrane GO:0005802C:trans-Golgi network GO:0005829C:cytosol GO:0032580C:Golgi cisterna membrane |
Other
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