Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002017736_111-2756
Len: 2,645 bp
Hits: 20
E-val: 1.10E-21
Sim: 97.47%
|
RXN18200.1transmembrane protein 170A |
GO:0071786P:endoplasmic reticulum tubular network organization GO:0005635C:nuclear envelope GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR953582_primary_scf7180002017834_465-2222
Len: 1,757 bp
Hits: 20
E-val: 1.50E-72
Sim: 96.82%
|
XP_018966088.1 homeobox protein cut-like 1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002017889_1-2403
Len: 2,402 bp
Hits: 20
E-val: 2.30E-124
Sim: 96.35%
|
XP_018937957.1 signal-induced proliferation-associated 1-like protein 2 |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002017897_1-2621
Len: 2,620 bp
Hits: 20
E-val: 2.10E-41
Sim: 99.04%
|
AWP12276.1AMPA receptor subunit GluR3B |
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
|
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SRR953582_primary_scf7180002017929_1-2357
Len: 2,356 bp
Hits: 20
E-val: 4.40E-35
Sim: 99.54%
|
XP_018954224.1 tyrosine-protein kinase yes-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0030154P:cell differentiation GO:0034334P:adherens junction maintenance GO:0060027P:convergent extension involved in gastrulation GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005102F:signaling receptor binding GO:0005524F:ATP binding GO:0005813C:centrosome GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0070161C:anchoring junction |
Signal Transduction
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SRR953582_primary_scf7180002017934_1-1112
Len: 1,111 bp
Hits: 20
E-val: 8.70E-175
Sim: 96.55%
|
XP_018976762.1 HAUS augmin-like complex subunit 3 isoform X1 |
GO:0031023P:microtubule organizing center organization GO:0051225P:spindle assembly GO:0051301P:cell division GO:0005737C:cytoplasm GO:0005815C:microtubule organizing center GO:0005874C:microtubule GO:0070652C:HAUS complex GO:0072686C:mitotic spindle |
Other
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SRR953582_primary_scf7180002017948_414-1964
Len: 1,550 bp
Hits: 20
E-val: 5.20E-101
Sim: 60.56%
|
XP_018936082.1 retinol dehydrogenase 7-like |
GO:0001754P:eye photoreceptor cell differentiation GO:0035238P:vitamin A biosynthetic process GO:0060041P:retina development in camera-type eye |
Cell Signaling
|
|
SRR953582_primary_scf7180002017949_485-2193
Len: 1,708 bp
Hits: 20
E-val: 7.30E-189
Sim: 63.96%
|
XP_018961857.1 E3 ubiquitin/ISG15 ligase TRIM25-like |
GO:0045087P:innate immune response GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002017957_1-1456
Len: 1,455 bp
Hits: 20
E-val: 4.10E-47
Sim: 63.2%
|
XP_018981999.1 zona pellucida sperm-binding protein 2-like |
GO:0004674F:protein serine/threonine kinase activity GO:0005488F:binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0005622C:intracellular anatomical structure GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002018039_488-2384
Len: 1,896 bp
Hits: 20
E-val: 1.80E-47
Sim: 95.43%
|
XP_018959559.1 solute carrier family 12 member 9-like |
GO:0006884P:cell volume homeostasis GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0071805P:potassium ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0015379F:potassium:chloride symporter activity GO:0005765C:lysosomal membrane GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002018039_2473-2973
Len: 500 bp
Hits: 20
E-val: 1.10E-47
Sim: 68.09%
|
XP_018950325.1 solute carrier family 12 member 9 |
GO:0006884P:cell volume homeostasis GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:1902476P:chloride transmembrane transport GO:0015379F:potassium:chloride symporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR953582_primary_scf7180002018135_551-1767
Len: 1,216 bp
Hits: 20
E-val: 5.80E-39
Sim: 65.44%
|
XP_018966677.1 F-BAR domain only protein 1-like |
GO:0006897P:endocytosis GO:0009953P:dorsal/ventral pattern formation GO:0030509P:BMP signaling pathway GO:0060028P:convergent extension involved in axis elongation GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR953582_primary_scf7180002018136_1-2461
Len: 2,460 bp
Hits: 20
E-val: 3.00E-18
Sim: 100%
|
XP_026051412.1rho GTPase-activating protein 26-like isoform X1 |
GO:0007165P:signal transduction GO:0005096F:GTPase activator activity GO:0005856C:cytoskeleton GO:0005925C:focal adhesion GO:0010008C:endosome membrane |
Other
|
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SRR953582_primary_scf7180002018142_1-3348
Len: 3,347 bp
Hits: 20
E-val: 1.40E-31
Sim: 88.54%
|
RXN28490.1follistatin-related 4-like protein |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0030510P:regulation of BMP signaling pathway GO:0050808P:synapse organization GO:0005509F:calcium ion binding GO:0008046F:axon guidance receptor activity GO:0005615C:extracellular space GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR953582_primary_scf7180002018173_1-733
Len: 732 bp
Hits: 20
E-val: 2.10E-28
Sim: 95.11%
|
XP_016149986.1 phospholipase D3-like |
GO:0004527F:exonuclease activity GO:0031901C:early endosome membrane GO:0031902C:late endosome membrane GO:0043202C:lysosomal lumen |
DNA Metabolism
|
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SRR953582_primary_scf7180002018185_1-1157
Len: 1,156 bp
Hits: 20
E-val: 1.70E-27
Sim: 56.67%
|
RXN23108.1transcription factor SOX-13 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180002018215_1-1263
Len: 1,262 bp
Hits: 20
E-val: 1.50E-13
Sim: 92.58%
|
RXN28834.1transcription factor 7-like 1-B |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030509P:BMP signaling pathway GO:0048699P:generation of neurons GO:0060070P:canonical Wnt signaling pathway GO:0060395P:SMAD protein signal transduction GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0000785C:chromatin GO:0005737C:cytoplasm GO:0016020C:membrane GO:0071144C:heteromeric SMAD protein complex GO:1990907C:beta-catenin-TCF complex |
Cell Signaling
|
|
SRR953582_primary_scf7180002018284_1896-2201
Len: 305 bp
Hits: 20
E-val: 1.30E-48
Sim: 94.89%
|
XP_018978019.1 vesicular glutamate transporter 3 |
GO:0035249P:synaptic transmission, glutamatergic GO:0035725P:sodium ion transmembrane transport GO:0044341P:sodium-dependent phosphate transport GO:0050803P:regulation of synapse structure or activity GO:0050957P:equilibrioception GO:0051631P:regulation of acetylcholine uptake GO:0051951P:positive regulation of glutamate uptake involved in transmission of nerve impulse GO:0055062P:phosphate ion homeostasis GO:0060005P:vestibular reflex GO:0098700P:neurotransmitter loading into synaptic vesicle GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0005326F:neurotransmitter transmembrane transporter activity GO:0005436F:sodium:phosphate symporter activity GO:0140788F:L-glutamate uniporter activity GO:0005886C:plasma membrane GO:0030672C:synaptic vesicle membrane GO:0034707C:chloride channel complex GO:0043005C:neuron projection GO:0060076C:excitatory synapse |
Ion Transport
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SRR953582_primary_scf7180002018332_1-2091
Len: 2,090 bp
Hits: 20
E-val: 1.10E-29
Sim: 73.9%
|
XP_016110866.1 myelin regulatory factor-like protein |
GO:0016540P:protein autoprocessing GO:0045893P:positive regulation of DNA-templated transcription GO:0003700F:DNA-binding transcription factor activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
Transcription Regulation
|
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SRR953582_primary_scf7180002018340_540-1649
Len: 1,109 bp
Hits: 20
E-val: 7.20E-28
Sim: 94.9%
|
XP_018925823.1 protein S100-A1-like isoform X1 |
GO:0005509F:calcium ion binding GO:0046914F:transition metal ion binding GO:0048306F:calcium-dependent protein binding GO:0005737C:cytoplasm |
Other
|
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SRR953582_primary_scf7180002018344_1-1769
Len: 1,768 bp
Hits: 20
E-val: 3.20E-62
Sim: 90.91%
|
XP_018918734.1 dual specificity protein phosphatase 4-like |
GO:0001714P:endodermal cell fate specification GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:1903225P:negative regulation of endodermal cell differentiation GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0017017F:MAP kinase tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002018451_413-2217
Len: 1,804 bp
Hits: 20
E-val: 3.10E-20
Sim: 94.32%
|
XP_026099575.1unconventional prefoldin RPB5 interactor 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003682F:chromatin binding GO:0003714F:transcription corepressor activity GO:0019212F:phosphatase inhibitor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002018480_369-1970
Len: 1,601 bp
Hits: 20
E-val: 4.20E-45
Sim: 72.72%
|
XP_018957468.1 methylmalonic aciduria and homocystinuria type D protein, mitochondrial-like isoform X1 |
GO:0009235P:cobalamin metabolic process GO:0005739C:mitochondrion |
Metabolism
|
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SRR953582_primary_scf7180002018503_1423-1872
Len: 449 bp
Hits: 20
E-val: 8.20E-15
Sim: 64.79%
|
XP_018973317.1 LOW QUALITY PROTEIN: proton-coupled amino acid transporter 4-like |
GO:0003333P:amino acid transmembrane transport GO:0015808P:L-alanine transport GO:0035524P:proline transmembrane transport GO:0015180F:L-alanine transmembrane transporter activity GO:0015193F:L-proline transmembrane transporter activity GO:0005774C:vacuolar membrane GO:0016020C:membrane |
Membrane Transport
|
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SRR953582_primary_scf7180002018514_1034-3305
Len: 2,271 bp
Hits: 20
E-val: 8.00E-34
Sim: 76.33%
|
XP_016406096.1 LOW QUALITY PROTEIN: cocaine esterase-like |
GO:0016787F:hydrolase activity GO:0031514C:motile cilium |
Other
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