Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002018551_778-2409
Len: 1,631 bp
Hits: 20
E-val: 4.50E-111
Sim: 55.59%
|
XP_018927567.1 nuclear receptor subfamily 1 group D member 1-like |
GO:0010468P:regulation of gene expression GO:0048511P:rhythmic process GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0043229C:intracellular organelle |
Transcription Regulation
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SRR953582_primary_scf7180002018564_1-3095
Len: 3,094 bp
Hits: 20
E-val: 7.50E-59
Sim: 60.58%
|
XP_018937248.1 tyrosine-protein kinase SYK-like isoform X1 |
GO:0002376P:immune system process GO:0035556P:intracellular signal transduction GO:0004713F:protein tyrosine kinase activity GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002018617_1-880
Len: 879 bp
Hits: 20
E-val: 2.30E-45
Sim: 52.72%
|
RXN09774.1bone morphogenetic 1-like protein |
GO:0006508P:proteolysis GO:0009058P:biosynthetic process GO:0009953P:dorsal/ventral pattern formation GO:0005488F:binding GO:0008233F:peptidase activity |
Protein Degradation
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SRR953582_primary_scf7180002018644_1-816
Len: 815 bp
Hits: 20
E-val: 4.10E-41
Sim: 98.88%
|
XP_016085233.1 phospholipid phosphatase-related protein type 5-like |
GO:0006644P:phospholipid metabolic process GO:0007165P:signal transduction GO:0046839P:phospholipid dephosphorylation GO:0008195F:phosphatidate phosphatase activity GO:0005886C:plasma membrane |
Metabolism
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SRR953582_primary_scf7180002018706_86-2443
Len: 2,357 bp
Hits: 20
E-val: 0
Sim: 90.9%
|
XP_018948666.1 probable G-protein coupled receptor 158, partial |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0043005C:neuron projection GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002018719_662-1850
Len: 1,188 bp
Hits: 20
E-val: 2.00E-76
Sim: 86.29%
|
XP_018943561.1 LOW QUALITY PROTEIN: F-box DNA helicase 1-like |
GO:0000724P:double-strand break repair via homologous recombination GO:0031297P:replication fork processing GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008194F:UDP-glycosyltransferase activity GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002018723_432-1900
Len: 1,468 bp
Hits: 20
E-val: 1.70E-16
Sim: 95.83%
|
XP_026055529.1FYVE and coiled-coil domain-containing protein 1-like isoform X1 |
GO:0072383P:plus-end-directed vesicle transport along microtubule GO:1901098P:positive regulation of autophagosome maturation GO:0008270F:zinc ion binding GO:0005764C:lysosome GO:0005770C:late endosome GO:0005776C:autophagosome |
Other
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SRR953582_primary_scf7180002018799_1-3724
Len: 3,723 bp
Hits: 20
E-val: 5.40E-19
Sim: 98.45%
|
XP_023272450.1receptor tyrosine-protein kinase erbB-4-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002018805_1-1457
Len: 1,456 bp
Hits: 20
E-val: 7.20E-44
Sim: 59.78%
|
XP_018949103.1 putative monooxygenase p33MONOX isoform X1 |
GO:0004497F:monooxygenase activity GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002018837_1-2005
Len: 2,004 bp
Hits: 20
E-val: 1.80E-21
Sim: 92.32%
|
XP_018952493.1 serologically defined colon cancer antigen 8 homolog |
GO:0001764P:neuron migration GO:0007098P:centrosome cycle GO:0030010P:establishment of cell polarity GO:0035148P:tube formation GO:0005813C:centrosome GO:0005814C:centriole |
Other
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SRR953582_primary_scf7180002018849_1611-2033
Len: 422 bp
Hits: 20
E-val: 8.70E-59
Sim: 79.28%
|
XP_016111849.1 low-density lipoprotein receptor-related protein 6-like |
GO:0006897P:endocytosis GO:0007399P:nervous system development GO:0060070P:canonical Wnt signaling pathway GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002018904_1-501
Len: 500 bp
Hits: 20
E-val: 6.90E-31
Sim: 66.52%
|
XP_018943580.1 ankyrin repeat domain-containing protein 13D-like |
Transcription Regulation
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SRR953582_primary_scf7180002018934_391-1671
Len: 1,280 bp
Hits: 20
E-val: 3.60E-47
Sim: 61.04%
|
XP_018943939.1 bifunctional polynucleotide phosphatase/kinase-like |
GO:0003725F:double-stranded RNA binding GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002018976_324-1440
Len: 1,116 bp
Hits: 20
E-val: 5.00E-29
Sim: 79.69%
|
XP_016427908.1 diphosphomevalonate decarboxylase |
GO:0003334P:keratinocyte development GO:0006695P:cholesterol biosynthetic process GO:0019287P:isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0045765P:regulation of angiogenesis GO:0003677F:DNA binding GO:0004163F:diphosphomevalonate decarboxylase activity GO:0005524F:ATP binding GO:0005829C:cytosol GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002018995_600-2331
Len: 1,731 bp
Hits: 20
E-val: 1.00E-52
Sim: 77.42%
|
XP_018962848.1 retinal guanylyl cyclase 2-like |
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0035556P:intracellular signal transduction GO:0001653F:peptide receptor activity GO:0003924F:GTPase activity GO:0004016F:adenylate cyclase activity GO:0004383F:guanylate cyclase activity GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002019043_1-1987
Len: 1,986 bp
Hits: 20
E-val: 5.20E-21
Sim: 94.51%
|
XP_016098063.1 LOW QUALITY PROTEIN: EGF domain-specific O-linked N-acetylglucosamine transferase-like |
GO:0097363F:protein O-acetylglucosaminyltransferase activity GO:0005788C:endoplasmic reticulum lumen |
Other
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SRR953582_primary_scf7180002019105_259-1322
Len: 1,063 bp
Hits: 20
E-val: 4.30E-70
Sim: 92.39%
|
XP_018962606.1 homeobox protein Hox-C6 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002019166_1-857
Len: 856 bp
Hits: 20
E-val: 6.10E-43
Sim: 96.55%
|
XP_018957995.1 LOW QUALITY PROTEIN: protein BANP |
GO:0006325P:chromatin organization GO:0010564P:regulation of cell cycle process GO:0034504P:protein localization to nucleus GO:0042177P:negative regulation of protein catabolic process GO:0003677F:DNA binding GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002019217_1-1801
Len: 1,800 bp
Hits: 20
E-val: 1.10E-46
Sim: 84.91%
|
XP_016417417.1 protein jagged-1a |
GO:0007219P:Notch signaling pathway GO:0048513P:animal organ development GO:0048731P:system development GO:0005112F:Notch binding GO:0005509F:calcium ion binding GO:0030414F:peptidase inhibitor activity GO:0005576C:extracellular region GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002019261_503-2103
Len: 1,600 bp
Hits: 20
E-val: 1.10E-127
Sim: 85.24%
|
XP_018925254.1 eomesodermin-like |
GO:0001707P:mesoderm formation GO:0001714P:endodermal cell fate specification GO:0002302P:CD8-positive, alpha-beta T cell differentiation involved in immune response GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002019355_1-2738
Len: 2,737 bp
Hits: 20
E-val: 8.20E-49
Sim: 88.39%
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XP_016142837.1 ankyrin-3-like, partial |
Other
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SRR953582_primary_scf7180002019431_1-1380
Len: 1,379 bp
Hits: 20
E-val: 1.90E-30
Sim: 67.6%
|
XP_018928196.1 multidrug resistance-associated protein 4-like |
GO:0006821P:chloride transport GO:0032310P:prostaglandin secretion GO:0034220P:monoatomic ion transmembrane transport GO:0061687P:detoxification of inorganic compound GO:1902017P:regulation of cilium assembly GO:0005254F:chloride channel activity GO:0015132F:prostaglandin transmembrane transporter activity GO:0015562F:efflux transmembrane transporter activity GO:0016853F:isomerase activity GO:0140359F:ABC-type transporter activity GO:0005783C:endoplasmic reticulum GO:0005886C:plasma membrane GO:0010008C:endosome membrane |
Ion Transport
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SRR953582_primary_scf7180002019481_1-1886
Len: 1,885 bp
Hits: 20
E-val: 9.40E-20
Sim: 98.3%
|
XP_009302858.1diacylglycerol kinase eta isoform X2 |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0046486P:glycerolipid metabolic process GO:0004143F:ATP-dependent diacylglycerol kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002019486_401-841
Len: 440 bp
Hits: 20
E-val: 3.30E-77
Sim: 94.31%
|
XP_018920463.1 mid1-interacting protein 1-B |
GO:0046890P:regulation of lipid biosynthetic process GO:0061842P:microtubule organizing center localization GO:0072175P:epithelial tube formation GO:0140496F:gamma-tubulin complex binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005874C:microtubule |
Other
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SRR953582_primary_scf7180002019631_1059-2568
Len: 1,509 bp
Hits: 20
E-val: 2.30E-141
Sim: 87.25%
|
XP_018936574.1 LOW QUALITY PROTEIN: rho GTPase-activating protein 29-like |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Other
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