Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924327_primary_scf7180002477479_1-1174
Len: 1,173 bp
Hits: 20
E-val: 4.60E-33
Sim: 97.83%
|
XP_018920954.1 probable helicase with zinc finger domain |
GO:0006355P:regulation of DNA-templated transcription GO:0035194P:regulatory ncRNA-mediated post-transcriptional gene silencing GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0043186C:P granule |
Transcription Regulation
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SRR924327_primary_scf7180002477491_47-1054
Len: 1,007 bp
Hits: 20
E-val: 8.70E-174
Sim: 91.39%
|
XP_018965251.1 sphingosine 1-phosphate receptor 3-like |
GO:0003376P:sphingosine-1-phosphate receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0019222P:regulation of metabolic process GO:0038036F:sphingosine-1-phosphate receptor activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Cell Signaling
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SRR924327_primary_scf7180002477528_1-989
Len: 988 bp
Hits: 20
E-val: 2.00E-69
Sim: 81.87%
|
XP_018919794.1 protein ABHD14A |
Other
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SRR924327_primary_scf7180002477605_1-1146
Len: 1,145 bp
Hits: 20
E-val: 5.20E-223
Sim: 96.01%
|
XP_018939534.1 amiloride-sensitive amine oxidase [copper-containing]-like |
GO:0009445P:putrescine metabolic process GO:0046677P:response to antibiotic GO:0005507F:copper ion binding GO:0008131F:primary methylamine oxidase activity GO:0048038F:quinone binding GO:0052597F:diamine oxidase activity GO:0005886C:plasma membrane |
Metabolism
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SRR924327_primary_scf7180002477606_1-1007
Len: 1,006 bp
Hits: 20
E-val: 4.80E-15
Sim: 87.47%
|
XP_017336700.1 septin-7 isoform X1 |
GO:0051301P:cell division GO:0005525F:GTP binding GO:0000776C:kinetochore GO:0005819C:spindle GO:0005929C:cilium GO:0030496C:midbody GO:0031105C:septin complex GO:0032154C:cleavage furrow |
Other
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SRR924327_primary_scf7180002477624_1-1750
Len: 1,749 bp
Hits: 20
E-val: 3.20E-30
Sim: 96.45%
|
XP_021447378.1serine/arginine-rich splicing factor 1-like isoform X2 |
GO:0000380P:alternative mRNA splicing, via spliceosome GO:0003729F:mRNA binding GO:0005737C:cytoplasm GO:0016607C:nuclear speck |
Other
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SRR924327_primary_scf7180002477675_1-830
Len: 829 bp
Hits: 20
E-val: 2.00E-22
Sim: 100%
|
XP_026138057.1unconventional myosin-XVIIIa-like isoform X5 |
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0003774F:cytoskeletal motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Other
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SRR924327_primary_scf7180002477814_1-1129
Len: 1,128 bp
Hits: 20
E-val: 2.90E-48
Sim: 80.14%
|
XP_026119249.1CAP-Gly domain-containing linker protein 1-like isoform X1 |
GO:0031116P:positive regulation of microtubule polymerization GO:0031122P:cytoplasmic microtubule organization GO:0051010F:microtubule plus-end binding GO:0005634C:nucleus GO:0005938C:cell cortex GO:0035371C:microtubule plus-end |
Other
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SRR924327_primary_scf7180002477894_609-1214
Len: 605 bp
Hits: 20
E-val: 1.10E-22
Sim: 95.96%
|
XP_026129237.1dihydropyrimidinase-related protein 2 isoform X2 |
GO:0030900P:forebrain development GO:0031103P:axon regeneration GO:0048935P:peripheral nervous system neuron development GO:0050770P:regulation of axonogenesis GO:1905483P:regulation of motor neuron migration GO:0016812F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides GO:0005829C:cytosol |
Other
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SRR924327_primary_scf7180002477919_1-779
Len: 778 bp
Hits: 20
E-val: 8.30E-31
Sim: 94.13%
|
RXN07589.1ubiquitin carboxyl-terminal hydrolase 32-like isoform X1 |
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0004672F:protein kinase activity GO:0004843F:cysteine-type deubiquitinase activity GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0005794C:Golgi apparatus |
Signal Transduction
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SRR924327_primary_scf7180002477948_515-1076
Len: 561 bp
Hits: 20
E-val: 9.50E-37
Sim: 97.57%
|
NP_001258599.1semaphorin-5A |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0048675P:axon extension GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924327_primary_scf7180002477963_1-668
Len: 667 bp
Hits: 20
E-val: 6.20E-35
Sim: 98.81%
|
XP_018965175.1 heterogeneous nuclear ribonucleoprotein L-like isoform X1 |
GO:0006397P:mRNA processing GO:0003723F:RNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
Other
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SRR924327_primary_scf7180002477975_1-618
Len: 617 bp
Hits: 20
E-val: 2.30E-31
Sim: 100%
|
AAS67694.1proliferating cell nuclear antigen, partial |
GO:0006272P:leading strand elongation GO:0006275P:regulation of DNA replication GO:0006298P:mismatch repair GO:0009617P:response to bacterium GO:0009636P:response to toxic substance GO:0014823P:response to activity GO:0019985P:translesion synthesis GO:0003677F:DNA binding GO:0030337F:DNA polymerase processivity factor activity GO:0043626C:PCNA complex GO:0070557C:PCNA-p21 complex |
DNA Metabolism
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SRR924327_primary_scf7180002477988_1-936
Len: 935 bp
Hits: 20
E-val: 2.50E-29
Sim: 97.1%
|
RXN30479.1hippocampus abundant transcript 1 |
GO:0055085P:transmembrane transport GO:0140734P:ammonium excretion GO:0022857F:transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
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SRR924327_primary_scf7180002477994_1-1428
Len: 1,427 bp
Hits: 20
E-val: 9.50E-25
Sim: 98.48%
|
XP_026074649.1high-affinity choline transporter 1-like |
GO:0006814P:sodium ion transport GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0008292P:acetylcholine biosynthetic process GO:0015871P:choline transport GO:0055085P:transmembrane transport GO:0005307F:choline:sodium symporter activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0030425C:dendrite GO:0043204C:perikaryon GO:0045202C:synapse |
Ion Transport
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SRR924327_primary_scf7180002478007_1-1142
Len: 1,141 bp
Hits: 20
E-val: 1.70E-45
Sim: 98.48%
|
XP_016120889.1 Bardet-Biedl syndrome 1 protein-like, partial |
GO:0001947P:heart looping GO:0003341P:cilium movement GO:0008593P:regulation of Notch signaling pathway GO:0032402P:melanosome transport GO:0033339P:pectoral fin development GO:0035845P:photoreceptor cell outer segment organization GO:0042632P:cholesterol homeostasis GO:0050908P:detection of light stimulus involved in visual perception GO:0060027P:convergent extension involved in gastrulation GO:0060028P:convergent extension involved in axis elongation GO:0061469P:regulation of type B pancreatic cell proliferation GO:0061512P:protein localization to cilium GO:0070121P:Kupffer's vesicle development GO:1905515P:non-motile cilium assembly GO:0005113F:patched binding GO:0005119F:smoothened binding GO:0005813C:centrosome GO:0005930C:axoneme GO:0034464C:BBSome |
Cell Signaling
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SRR924327_primary_scf7180002478020_1-1576
Len: 1,575 bp
Hits: 20
E-val: 3.20E-37
Sim: 53.55%
|
XP_023868847.1transcription activator BRG1 isoform X1 |
GO:0005488F:binding GO:0012505C:endomembrane system GO:0031090C:organelle membrane GO:0031410C:cytoplasmic vesicle |
Other
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SRR924327_primary_scf7180002478141_1-677
Len: 676 bp
Hits: 20
E-val: 1.60E-25
Sim: 99.03%
|
XP_018974266.1 dedicator of cytokinesis protein 1-like |
GO:0007264P:small GTPase-mediated signal transduction GO:0007520P:myoblast fusion GO:0016477P:cell migration GO:0022011P:myelination in peripheral nervous system GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR924327_primary_scf7180002478228_339-1260
Len: 921 bp
Hits: 20
E-val: 1.30E-38
Sim: 90.82%
|
XP_016146644.1 hepatic leukemia factor-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924327_primary_scf7180002478243_1-990
Len: 989 bp
Hits: 20
E-val: 2.30E-25
Sim: 99.2%
|
XP_026086851.1liprin-alpha-2-like isoform X6 |
Other
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SRR924327_primary_scf7180002478245_1-837
Len: 836 bp
Hits: 20
E-val: 2.70E-27
Sim: 83.43%
|
XP_016106620.1 lamin-B1 |
GO:0006998P:nuclear envelope organization GO:0007010P:cytoskeleton organization GO:0007097P:nuclear migration GO:0031507P:heterochromatin formation GO:0051664P:nuclear pore localization GO:0090435P:protein localization to nuclear envelope GO:0005200F:structural constituent of cytoskeleton GO:0005652C:nuclear lamina GO:0005882C:intermediate filament |
DNA Metabolism
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SRR924327_primary_scf7180002478335_1-1229
Len: 1,228 bp
Hits: 20
E-val: 3.30E-42
Sim: 99.17%
|
XP_016097605.1 collagen alpha-1(XII) chain-like |
GO:0007155P:cell adhesion GO:0035987P:endodermal cell differentiation GO:0005581C:collagen trimer GO:0005615C:extracellular space |
Other
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SRR924327_primary_scf7180002478395_1-1038
Len: 1,037 bp
Hits: 20
E-val: 1.80E-36
Sim: 98.78%
|
XP_018967017.1 PHD finger protein 24-like |
GO:0006955P:immune response GO:0009966P:regulation of signal transduction GO:0045892P:negative regulation of DNA-templated transcription GO:0060326P:cell chemotaxis GO:0003714F:transcription corepressor activity GO:0005509F:calcium ion binding GO:0008009F:chemokine activity GO:0008048F:calcium sensitive guanylate cyclase activator activity GO:0008270F:zinc ion binding GO:0005615C:extracellular space GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924327_primary_scf7180002478541_615-1388
Len: 773 bp
Hits: 20
E-val: 2.60E-24
Sim: 99.55%
|
XP_016366036.1 zinc finger SWIM domain-containing protein 6-like |
GO:0008270F:zinc ion binding GO:0031462C:Cul2-RING ubiquitin ligase complex |
DNA Metabolism
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SRR924327_primary_scf7180002478628_1-1329
Len: 1,328 bp
Hits: 20
E-val: 3.30E-64
Sim: 63.33%
|
RXN08823.1E3 ubiquitin- ligase TRIM37-like protein |
Other
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