Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002024977_1-1405
Len: 1,404 bp
Hits: 20
E-val: 5.90E-27
Sim: 85.88%
|
XP_016108703.1 contactin-5 |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0098552C:side of membrane |
Other
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SRR953582_primary_scf7180002025000_687-1740
Len: 1,053 bp
Hits: 20
E-val: 6.20E-29
Sim: 94.87%
|
XP_018969071.1 dual specificity mitogen-activated protein kinase kinase 2-like |
GO:0032872P:regulation of stress-activated MAPK cascade GO:0090170P:regulation of Golgi inheritance GO:2000641P:regulation of early endosome to late endosome transport GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0046983F:protein dimerization activity GO:0005739C:mitochondrion GO:0005769C:early endosome GO:0005770C:late endosome GO:0005925C:focal adhesion |
Signal Transduction
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SRR953582_primary_scf7180002025015_1-1847
Len: 1,846 bp
Hits: 20
E-val: 6.30E-29
Sim: 98.92%
|
XP_026076755.1M-protein, striated muscle-like isoform X2 |
GO:0045214P:sarcomere organization GO:0031430C:M band |
Other
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SRR953582_primary_scf7180002025180_591-1674
Len: 1,083 bp
Hits: 20
E-val: 3.30E-126
Sim: 92.4%
|
XP_018980326.1 LOW QUALITY PROTEIN: homeobox protein Hox-A13a-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0033333P:fin development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002025205_511-1669
Len: 1,158 bp
Hits: 20
E-val: 2.80E-35
Sim: 93.87%
|
XP_018972869.1 paired box protein Pax-6-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002025330_1-1197
Len: 1,196 bp
Hits: 20
E-val: 2.10E-33
Sim: 96.19%
|
XP_018944224.1 phosphoglucomutase-1-like, partial |
GO:0006006P:glucose metabolic process GO:0033499P:galactose catabolic process via UDP-galactose, Leloir pathway GO:0000287F:magnesium ion binding GO:0004614F:phosphoglucomutase activity GO:0005829C:cytosol |
Metabolism
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SRR953582_primary_scf7180002025345_171-3645
Len: 3,474 bp
Hits: 20
E-val: 8.80E-24
Sim: 98.75%
|
RXN15805.1signal recognition particle subunit SRP68 |
GO:0006614P:SRP-dependent cotranslational protein targeting to membrane GO:0005047F:signal recognition particle binding GO:0008312F:7S RNA binding GO:0030942F:endoplasmic reticulum signal peptide binding GO:0005730C:nucleolus GO:0005786C:signal recognition particle, endoplasmic reticulum targeting |
Other
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SRR953582_primary_scf7180002025350_905-1664
Len: 759 bp
Hits: 20
E-val: 1.20E-58
Sim: 90.65%
|
XP_018966596.1 regulatory factor X-associated protein-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002025398_433-1494
Len: 1,061 bp
Hits: 20
E-val: 6.10E-178
Sim: 90.64%
|
XP_018952173.1 transcription factor Sox-11-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0002088P:lens development in camera-type eye GO:0007420P:brain development GO:0045879P:negative regulation of smoothened signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046548P:retinal rod cell development GO:0061386P:closure of optic fissure GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180002025480_1-1322
Len: 1,321 bp
Hits: 20
E-val: 8.40E-84
Sim: 54.08%
|
XP_016382964.1 disabled homolog 2-like isoform X1 |
GO:0006898P:receptor-mediated endocytosis GO:0010718P:positive regulation of epithelial to mesenchymal transition GO:0045807P:positive regulation of endocytosis GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0035615F:clathrin adaptor activity GO:0038024F:cargo receptor activity GO:0005737C:cytoplasm GO:0005905C:clathrin-coated pit GO:0043231C:intracellular membrane-bounded organelle |
Cell Signaling
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SRR953582_primary_scf7180002025492_385-2190
Len: 1,805 bp
Hits: 20
E-val: 1.60E-125
Sim: 94.48%
|
RXN08659.1nuclear receptor subfamily 5 group A member 2-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0009888P:tissue development GO:0030522P:intracellular receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0000502C:proteasome complex GO:0090575C:RNA polymerase II transcription regulator complex |
Signal Transduction
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SRR953582_primary_scf7180002025506_585-1226
Len: 641 bp
Hits: 20
E-val: 2.40E-12
Sim: 95.95%
|
XP_026067388.1pleckstrin homology-like domain family B member 1 isoform X5 |
GO:0070507P:regulation of microtubule cytoskeleton organization GO:0045180C:basal cortex |
Other
|
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SRR953582_primary_scf7180002025611_1-1806
Len: 1,805 bp
Hits: 20
E-val: 4.40E-27
Sim: 96.14%
|
XP_018922276.1 glycogenin-1-like |
GO:0005978P:glycogen biosynthetic process GO:0008466F:glycogenin glucosyltransferase activity GO:0005737C:cytoplasm |
Other
|
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SRR953582_primary_scf7180002025770_1-1228
Len: 1,227 bp
Hits: 20
E-val: 5.20E-128
Sim: 93.19%
|
XP_018969421.1 LOW QUALITY PROTEIN: D(1A) dopamine receptor-like |
GO:0001963P:synaptic transmission, dopaminergic GO:0007212P:G protein-coupled dopamine receptor signaling pathway GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0001588F:dopamine neurotransmitter receptor activity, coupled via Gs GO:0004938F:alpha2-adrenergic receptor activity GO:0005886C:plasma membrane GO:0045202C:synapse |
Cell Signaling
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SRR953582_primary_scf7180002025928_2873-3223
Len: 350 bp
Hits: 20
E-val: 5.90E-29
Sim: 78.3%
|
XP_026051721.1neurexin-1-like isoform X3 |
GO:0007155P:cell adhesion GO:0007268P:chemical synaptic transmission GO:0007528P:neuromuscular junction development GO:0008045P:motor neuron axon guidance GO:0048846P:axon extension involved in axon guidance GO:0016020C:membrane GO:0045202C:synapse |
Other
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SRR953582_primary_scf7180002025993_1-599
Len: 598 bp
Hits: 20
E-val: 8.30E-23
Sim: 88.2%
|
XP_018944850.1 LOW QUALITY PROTEIN: collagen alpha-1(V) chain-like, partial |
GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002026006_1-1570
Len: 1,569 bp
Hits: 20
E-val: 1.30E-144
Sim: 92.99%
|
XP_018975754.1 LOW QUALITY PROTEIN: endoribonuclease Dicer-like |
GO:0006309P:apoptotic DNA fragmentation GO:0014032P:neural crest cell development GO:0021591P:ventricular system development GO:0030318P:melanocyte differentiation GO:0030422P:siRNA processing GO:0031054P:pre-miRNA processing GO:0031507P:heterochromatin formation GO:0035279P:miRNA-mediated gene silencing by mRNA destabilization GO:0050767P:regulation of neurogenesis GO:0098795P:global gene silencing by mRNA cleavage GO:1904888P:cranial skeletal system development GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0004525F:ribonuclease III activity GO:0004530F:deoxyribonuclease I activity GO:0005515F:protein binding GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0070883F:pre-miRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016442C:RISC complex GO:0070578C:RISC-loading complex |
DNA Metabolism
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SRR953582_primary_scf7180002026038_1071-2529
Len: 1,458 bp
Hits: 20
E-val: 5.90E-155
Sim: 93.91%
|
XP_018948321.1 prostaglandin E2 receptor EP3 subtype-like |
GO:0006954P:inflammatory response GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0014827P:intestine smooth muscle contraction GO:0060455P:negative regulation of gastric acid secretion GO:0060836P:lymphatic endothelial cell differentiation GO:1903672P:positive regulation of sprouting angiogenesis GO:0004957F:prostaglandin E receptor activity GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002026046_235-801
Len: 566 bp
Hits: 20
E-val: 2.80E-97
Sim: 90.76%
|
XP_018941946.1 claudin-4-like |
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
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SRR953582_primary_scf7180002026073_327-2475
Len: 2,148 bp
Hits: 20
E-val: 1.30E-20
Sim: 64.52%
|
XP_018950138.1 sideroflexin-5-like isoform X1 |
GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0031966C:mitochondrial membrane |
Membrane Transport
|
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SRR953582_primary_scf7180002026112_1-3360
Len: 3,359 bp
Hits: 20
E-val: 5.90E-41
Sim: 99.43%
|
XP_018923133.1 LOW QUALITY PROTEIN: connector enhancer of kinase suppressor of ras 2-like |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002026115_1-2304
Len: 2,303 bp
Hits: 20
E-val: 1.30E-52
Sim: 96.89%
|
RXN15709.1transforming growth factor beta-2 |
GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0009653P:anatomical structure morphogenesis GO:0042127P:regulation of cell population proliferation GO:0051781P:positive regulation of cell division GO:0060021P:roof of mouth development GO:0061056P:sclerotome development GO:0005125F:cytokine activity GO:0005160F:transforming growth factor beta receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002026152_1016-2722
Len: 1,706 bp
Hits: 20
E-val: 1.60E-159
Sim: 97.44%
|
XP_018921405.1 carbohydrate sulfotransferase 11-like |
GO:0016051P:carbohydrate biosynthetic process GO:0030166P:proteoglycan biosynthetic process GO:0008146F:sulfotransferase activity GO:0000139C:Golgi membrane |
Other
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SRR953582_primary_scf7180002026158_209-724
Len: 515 bp
Hits: 20
E-val: 1.70E-53
Sim: 69.65%
|
XP_026100789.1retinol dehydrogenase 8-like |
GO:0042572P:retinol metabolic process GO:0004745F:all-trans-retinol dehydrogenase (NAD+) activity GO:0005829C:cytosol |
Metabolism
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SRR953582_primary_scf7180002026303_1-304
Len: 303 bp
Hits: 20
E-val: 3.30E-28
Sim: 99.6%
|
XP_026140185.1ankyrin repeat and IBR domain-containing protein 1-like isoform X1 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0031624F:ubiquitin conjugating enzyme binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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