Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002029099_367-1338
Len: 971 bp
Hits: 20
E-val: 2.70E-172
Sim: 98.24%
|
XP_018966048.1 double-stranded RNA-specific editase 1-like isoform X1 |
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002029117_1-2845
Len: 2,844 bp
Hits: 20
E-val: 8.40E-89
Sim: 73.94%
|
RXN26901.1low-density lipo receptor-related 1-like protein |
GO:0006898P:receptor-mediated endocytosis GO:0006909P:phagocytosis GO:0150093P:amyloid-beta clearance by transcytosis GO:0150094P:amyloid-beta clearance by cellular catabolic process GO:1901342P:regulation of vasculature development GO:0034185F:apolipoprotein binding GO:0038024F:cargo receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002029145_1-2093
Len: 2,092 bp
Hits: 20
E-val: 6.40E-54
Sim: 79.86%
|
XP_022529087.1myosin-7-like |
GO:0007512P:adult heart development GO:0030049P:muscle filament sliding GO:0045214P:sarcomere organization GO:0060048P:cardiac muscle contraction GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Other
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SRR953582_primary_scf7180002029186_942-1932
Len: 990 bp
Hits: 20
E-val: 1.70E-81
Sim: 86.31%
|
XP_018967196.1 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X1 |
GO:0005975P:carbohydrate metabolic process GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0015018F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0005576C:extracellular region |
Metabolism
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SRR953582_primary_scf7180002029224_1-2791
Len: 2,790 bp
Hits: 20
E-val: 4.90E-25
Sim: 74.9%
|
XP_026081825.1TNF receptor-associated factor 4-like |
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180002029334_1-983
Len: 982 bp
Hits: 20
E-val: 9.50E-16
Sim: 82.61%
|
XP_016355341.1 cytoplasmic dynein 2 light intermediate chain 1-like isoform X2 |
GO:0035721P:intraciliary retrograde transport GO:0035735P:intraciliary transport involved in cilium assembly GO:0045504F:dynein heavy chain binding GO:0005813C:centrosome GO:0005868C:cytoplasmic dynein complex GO:0005874C:microtubule GO:0005930C:axoneme GO:0036064C:ciliary basal body GO:0097730C:non-motile cilium |
Other
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SRR953582_primary_scf7180002029354_1-2710
Len: 2,709 bp
Hits: 20
E-val: 1.80E-27
Sim: 94.17%
|
XP_026096740.1grainyhead-like protein 2 homolog |
GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048839P:inner ear development GO:0060561P:apoptotic process involved in morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002029467_395-1547
Len: 1,152 bp
Hits: 20
E-val: 1.40E-162
Sim: 99.48%
|
XP_016416047.1 kelch-like protein 13 isoform X1 |
GO:0016567P:protein ubiquitination GO:0032465P:regulation of cytokinesis GO:0004842F:ubiquitin-protein transferase activity GO:0097602F:cullin family protein binding GO:0031463C:Cul3-RING ubiquitin ligase complex |
Immune Response
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SRR953582_primary_scf7180002029519_911-1348
Len: 437 bp
Hits: 20
E-val: 2.70E-31
Sim: 73.73%
|
XP_026111790.1plexin-A1-like |
GO:0002040P:sprouting angiogenesis GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0042060P:wound healing GO:0071526P:semaphorin-plexin signaling pathway GO:0097485P:neuron projection guidance GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002029580_490-2146
Len: 1,656 bp
Hits: 20
E-val: 3.60E-31
Sim: 71.77%
|
XP_018981057.1 organic solute transporter subunit alpha |
GO:0009987P:cellular process GO:0015721P:bile acid and bile salt transport GO:0071705P:nitrogen compound transport GO:0022857F:transmembrane transporter activity GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0005635C:nuclear envelope GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0032991C:protein-containing complex |
Membrane Transport
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SRR953582_primary_scf7180002029583_1-1681
Len: 1,680 bp
Hits: 20
E-val: 2.40E-51
Sim: 89.1%
|
XP_026099159.1PHD finger protein 14-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR953582_primary_scf7180002029637_1-1338
Len: 1,337 bp
Hits: 20
E-val: 2.00E-88
Sim: 89.25%
|
XP_018932644.1 alpha-2,8-sialyltransferase 8F-like |
GO:0006491P:N-glycan processing GO:0009311P:oligosaccharide metabolic process GO:0003828F:alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity GO:0000139C:Golgi membrane |
Metabolism
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SRR953582_primary_scf7180002029648_1-1458
Len: 1,457 bp
Hits: 20
E-val: 3.80E-29
Sim: 99.78%
|
RXN23908.1sortilin-related receptor isoform X1 |
GO:0006622P:protein targeting to lysosome GO:0006892P:post-Golgi vesicle-mediated transport GO:0006897P:endocytosis GO:0045053P:protein retention in Golgi apparatus GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus GO:0005886C:plasma membrane GO:0030658C:transport vesicle membrane GO:0031901C:early endosome membrane GO:0032585C:multivesicular body membrane GO:0055038C:recycling endosome membrane |
Other
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SRR953582_primary_scf7180002029651_1-2415
Len: 2,414 bp
Hits: 20
E-val: 4.50E-27
Sim: 81.73%
|
XP_016312917.1 LOW QUALITY PROTEIN: ceramide kinase |
Signal Transduction
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|
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SRR953582_primary_scf7180002029695_1-1325
Len: 1,324 bp
Hits: 20
E-val: 2.70E-21
Sim: 89.85%
|
CDQ91060.1unnamed protein product, partial |
GO:0036444P:calcium import into the mitochondrion GO:0051560P:mitochondrial calcium ion homeostasis GO:0005509F:calcium ion binding GO:0005758C:mitochondrial intermembrane space GO:1990246C:uniplex complex |
Other
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SRR953582_primary_scf7180002029801_859-2532
Len: 1,673 bp
Hits: 20
E-val: 5.70E-29
Sim: 90.87%
|
XP_018926532.1 IQ and ubiquitin-like domain-containing protein |
GO:0030317P:flagellated sperm motility GO:0060271P:cilium assembly GO:0001669C:acrosomal vesicle GO:0031514C:motile cilium |
Other
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SRR953582_primary_scf7180002029812_1098-1759
Len: 661 bp
Hits: 20
E-val: 2.70E-30
Sim: 61.22%
|
XP_021472887.1ryanodine receptor 1-like |
Other
|
|
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SRR953582_primary_scf7180002029853_1-2800
Len: 2,799 bp
Hits: 20
E-val: 1.80E-51
Sim: 50.57%
|
XP_018970206.1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like |
GO:0016192P:vesicle-mediated transport GO:0032012P:regulation of ARF protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm GO:0005794C:Golgi apparatus GO:0012505C:endomembrane system GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR953582_primary_scf7180002029920_1-1863
Len: 1,862 bp
Hits: 20
E-val: 2.50E-25
Sim: 80.29%
|
KPP61781.1sodium- and chloride-dependent glycine transporter 1-like, partial |
GO:0006836P:neurotransmitter transport GO:0007626P:locomotory behavior GO:0035725P:sodium ion transmembrane transport GO:0060080P:inhibitory postsynaptic potential GO:0060092P:regulation of synaptic transmission, glycinergic GO:1903804P:glycine import across plasma membrane GO:0005283F:amino acid:sodium symporter activity GO:0015187F:glycine transmembrane transporter activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002029922_1-2338
Len: 2,337 bp
Hits: 20
E-val: 5.50E-46
Sim: 58.71%
|
NP_001338643.1low-density lipoprotein receptor-related protein 4 |
GO:0007274P:neuromuscular synaptic transmission GO:0007529P:establishment of synaptic specificity at neuromuscular junction GO:0031103P:axon regeneration GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002030050_1-1027
Len: 1,026 bp
Hits: 20
E-val: 1.60E-66
Sim: 89.59%
|
XP_018942885.1 relaxin-3 receptor 1-like |
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0060326P:cell chemotaxis GO:0070098P:chemokine-mediated signaling pathway GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0005634C:nucleus GO:0009897C:external side of plasma membrane GO:0035267C:NuA4 histone acetyltransferase complex |
Cell Signaling
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SRR953582_primary_scf7180002030107_1-1741
Len: 1,740 bp
Hits: 20
E-val: 7.30E-43
Sim: 54.87%
|
XP_016400764.1 serine protease 27-like |
GO:0006508P:proteolysis GO:0004252F:serine-type endopeptidase activity GO:0008236F:serine-type peptidase activity |
Protein Degradation
|
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SRR953582_primary_scf7180002030162_1-1735
Len: 1,734 bp
Hits: 20
E-val: 3.70E-23
Sim: 96.98%
|
XP_016091646.1 ATP-binding cassette sub-family C member 8-like |
GO:0006813P:potassium ion transport GO:0055085P:transmembrane transport GO:0071333P:cellular response to glucose stimulus GO:0005524F:ATP binding GO:0008281F:sulfonylurea receptor activity GO:0016887F:ATP hydrolysis activity GO:0140359F:ABC-type transporter activity GO:0005886C:plasma membrane GO:0032991C:protein-containing complex |
Cell Signaling
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SRR953582_primary_scf7180002030202_1-1720
Len: 1,719 bp
Hits: 20
E-val: 8.20E-31
Sim: 67.81%
|
XP_016339996.1 golgin subfamily A member 2 |
GO:0001966P:thigmotaxis GO:0007030P:Golgi organization GO:0007420P:brain development GO:0007519P:skeletal muscle tissue development GO:0000137C:Golgi cis cisterna GO:0005801C:cis-Golgi network GO:0005856C:cytoskeleton GO:0032580C:Golgi cisterna membrane |
Other
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SRR953582_primary_scf7180002030231_1-567
Len: 566 bp
Hits: 20
E-val: 2.60E-18
Sim: 97.62%
|
RXN08514.1WD repeat-containing 6 |
GO:0030488P:tRNA methylation GO:1902358P:sulfate transmembrane transport GO:0008271F:secondary active sulfate transmembrane transporter activity GO:0030552F:cAMP binding GO:0047372F:monoacylglycerol lipase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Membrane Transport
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