Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002032940_1-1651
Len: 1,650 bp
Hits: 20
E-val: 1.50E-18
Sim: 93.04%
|
XP_016149016.1 nck-associated protein 1 |
GO:0001843P:neural tube closure GO:0016477P:cell migration GO:0030031P:cell projection assembly GO:0030866P:cortical actin cytoskeleton organization GO:0048812P:neuron projection morphogenesis GO:0005576C:extracellular region GO:0031209C:SCAR complex GO:0031258C:lamellipodium membrane |
Other
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SRR953582_primary_scf7180002033014_1-2473
Len: 2,472 bp
Hits: 20
E-val: 1.30E-93
Sim: 97.17%
|
XP_018934797.1 LOW QUALITY PROTEIN: pappalysin-1-like |
GO:0006508P:proteolysis GO:0007166P:cell surface receptor signaling pathway GO:0043009P:chordate embryonic development GO:0004222F:metalloendopeptidase activity GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002033042_374-2039
Len: 1,665 bp
Hits: 20
E-val: 4.60E-71
Sim: 94.22%
|
XP_018939070.1 T-cell leukemia homeobox protein 1-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048536P:spleen development GO:0050776P:regulation of immune response GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002033077_437-2053
Len: 1,616 bp
Hits: 20
E-val: 1.80E-11
Sim: 81%
|
CDQ93823.1unnamed protein product |
GO:0006915P:apoptotic process GO:0007411P:axon guidance GO:0038007P:netrin-activated signaling pathway GO:0005042F:netrin receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002033105_77-1007
Len: 930 bp
Hits: 20
E-val: 1.80E-27
Sim: 69.35%
|
XP_018920149.1 presenilin-2 |
GO:0001964P:startle response GO:0006509P:membrane protein ectodomain proteolysis GO:0007219P:Notch signaling pathway GO:0007420P:brain development GO:0010506P:regulation of autophagy GO:0016485P:protein processing GO:0019896P:axonal transport of mitochondrion GO:0022008P:neurogenesis GO:0030318P:melanocyte differentiation GO:0034205P:amyloid-beta formation GO:0055074P:calcium ion homeostasis GO:0061053P:somite development GO:0042500F:aspartic endopeptidase activity, intramembrane cleaving GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane GO:0070765C:gamma-secretase complex GO:1904115C:axon cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180002033159_256-1208
Len: 952 bp
Hits: 20
E-val: 1.50E-29
Sim: 98.53%
|
XP_026124998.1neuronal acetylcholine receptor subunit alpha-7-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0060079P:excitatory postsynaptic potential GO:0004888F:transmembrane signaling receptor activity GO:0022848F:acetylcholine-gated monoatomic cation-selective channel activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002033419_1-1149
Len: 1,148 bp
Hits: 20
E-val: 7.20E-23
Sim: 97.99%
|
XP_018976801.1 membrane-associated progesterone receptor component 2 isoform X1 |
GO:0001556P:oocyte maturation GO:0015886P:heme transport GO:0030728P:ovulation GO:0060612P:adipose tissue development GO:0015232F:heme transmembrane transporter activity GO:0020037F:heme binding GO:0005635C:nuclear envelope GO:0005783C:endoplasmic reticulum GO:0016020C:membrane GO:0098978C:glutamatergic synapse |
Membrane Transport
|
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SRR953582_primary_scf7180002033459_51-1782
Len: 1,731 bp
Hits: 20
E-val: 5.50E-51
Sim: 61.25%
|
XP_016333485.1 Niemann-Pick C1 protein-like |
GO:0009790P:embryo development GO:0009987P:cellular process |
Other
|
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SRR953582_primary_scf7180002033488_1-1426
Len: 1,425 bp
Hits: 20
E-val: 2.90E-29
Sim: 52.65%
|
XP_016418856.1 E3 ubiquitin-protein ligase RNF216-like, partial |
GO:0048513P:animal organ development GO:0048731P:system development |
Other
|
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SRR953582_primary_scf7180002033509_1-1809
Len: 1,808 bp
Hits: 20
E-val: 1.30E-39
Sim: 55.62%
|
XP_026128916.1chromodomain-helicase-DNA-binding protein 1-like isoform X1 |
DNA Metabolism
|
|
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SRR953582_primary_scf7180002033606_1-1036
Len: 1,035 bp
Hits: 20
E-val: 2.80E-74
Sim: 98.09%
|
XP_026062601.1alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3-like isoform X1 |
GO:0001574P:ganglioside biosynthetic process GO:0009311P:oligosaccharide metabolic process GO:0001665F:alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity GO:0000139C:Golgi membrane |
Metabolism
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SRR953582_primary_scf7180002033619_71-1647
Len: 1,576 bp
Hits: 20
E-val: 2.50E-18
Sim: 86.65%
|
XP_026117763.1poly(rC)-binding protein 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002033620_1-2196
Len: 2,195 bp
Hits: 20
E-val: 6.10E-63
Sim: 94.8%
|
XP_026127674.1dynein heavy chain 7, axonemal-like |
GO:0007018P:microtubule-based movement GO:0071910P:determination of liver left/right asymmetry GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005929C:cilium GO:0030286C:dynein complex |
Other
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SRR953582_primary_scf7180002033634_1-1528
Len: 1,527 bp
Hits: 20
E-val: 5.80E-20
Sim: 93.66%
|
XP_016091009.1 heat shock 70 kDa protein 4-like |
GO:0006457P:protein folding GO:0000774F:adenyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005634C:nucleus GO:0005829C:cytosol |
Stress Response
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SRR953582_primary_scf7180002033808_1-3005
Len: 3,004 bp
Hits: 20
E-val: 1.90E-27
Sim: 95.1%
|
XP_026102998.1plexin-A1-like |
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002033889_702-1477
Len: 775 bp
Hits: 20
E-val: 9.80E-16
Sim: 97.5%
|
NP_957203.1cyclic AMP-responsive element-binding protein 1 |
GO:0001756P:somitogenesis GO:0006357P:regulation of transcription by RNA polymerase II GO:0030917P:midbrain-hindbrain boundary development GO:0060028P:convergent extension involved in axis elongation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0035497F:cAMP response element binding GO:1990589C:ATF4-CREB1 transcription factor complex |
Transcription Regulation
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SRR953582_primary_scf7180002033910_1-1115
Len: 1,114 bp
Hits: 20
E-val: 1.50E-41
Sim: 65.66%
|
XP_018927011.1 homeobox protein meis3-like isoform X2 |
GO:0009653P:anatomical structure morphogenesis GO:0030902P:hindbrain development GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048484P:enteric nervous system development GO:1901166P:neural crest cell migration involved in autonomic nervous system development GO:0005515F:protein binding GO:0008233F:peptidase activity GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
|
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SRR953582_primary_scf7180002033938_1-1688
Len: 1,687 bp
Hits: 20
E-val: 1.30E-20
Sim: 91.48%
|
XP_016397187.1 protein unc-119 homolog B-B-like |
GO:0000281P:mitotic cytokinesis GO:0007601P:visual perception GO:0042953P:lipoprotein transport GO:0048841P:regulation of axon extension involved in axon guidance GO:0071632P:optomotor response GO:1900186P:negative regulation of clathrin-dependent endocytosis GO:2001287P:negative regulation of caveolin-mediated endocytosis GO:0008289F:lipid binding GO:0000922C:spindle pole GO:0005813C:centrosome GO:0045171C:intercellular bridge GO:0051233C:spindle midzone |
Immune Response
|
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SRR953582_primary_scf7180002033995_1-1959
Len: 1,958 bp
Hits: 20
E-val: 2.60E-33
Sim: 53.86%
|
XP_016339142.1 telomere repeats-binding bouquet formation protein 1-like |
GO:0051321P:meiotic cell cycle GO:0043229C:intracellular organelle |
Other
|
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SRR953582_primary_scf7180002034154_1785-2309
Len: 524 bp
Hits: 20
E-val: 2.50E-92
Sim: 95.17%
|
XP_018943612.1 phosducin-like |
GO:0007601P:visual perception GO:0008277P:regulation of G protein-coupled receptor signaling pathway GO:0001750C:photoreceptor outer segment GO:0001917C:photoreceptor inner segment GO:0005634C:nucleus GO:0005829C:cytosol |
Cell Signaling
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SRR953582_primary_scf7180002034175_1-2537
Len: 2,536 bp
Hits: 20
E-val: 2.00E-94
Sim: 91.41%
|
XP_018953314.1 LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like |
GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space |
Other
|
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SRR953582_primary_scf7180002034184_1-742
Len: 741 bp
Hits: 20
E-val: 5.50E-32
Sim: 99.64%
|
XP_026110992.1actin-related protein 2/3 complex subunit 1B-like |
GO:0002574P:thrombocyte differentiation GO:0030217P:T cell differentiation GO:0034314P:Arp2/3 complex-mediated actin nucleation GO:0051015F:actin filament binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005885C:Arp2/3 protein complex |
Other
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SRR953582_primary_scf7180002034264_1-1176
Len: 1,175 bp
Hits: 20
E-val: 4.80E-22
Sim: 99.5%
|
XP_016136147.1 unconventional myosin-XIX-like |
GO:0007015P:actin filament organization GO:0048731P:system development GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016020C:membrane GO:0016459C:myosin complex |
Other
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SRR953582_primary_scf7180002034372_1-2470
Len: 2,469 bp
Hits: 20
E-val: 4.30E-33
Sim: 98.31%
|
XP_026137019.1gamma-aminobutyric acid receptor subunit alpha-4-like |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0051932P:synaptic transmission, GABAergic GO:1902476P:chloride transmembrane transport GO:1904862P:inhibitory synapse assembly GO:0004890F:GABA-A receptor activity GO:0008503F:benzodiazepine receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:0032590C:dendrite membrane GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002034373_1-880
Len: 879 bp
Hits: 20
E-val: 2.20E-48
Sim: 95.03%
|
XP_018973290.1 rhomboid-related protein 4-like |
GO:0004252F:serine-type endopeptidase activity GO:0016020C:membrane |
Protein Degradation
|