Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002045201_1-2040
Len: 2,039 bp
Hits: 20
E-val: 6.50E-35
Sim: 84.65%
|
XP_018975084.1 collagen alpha-6(VI) chain-like |
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
Protein Degradation
|
|
SRR953582_primary_scf7180002045216_2190-2639
Len: 449 bp
Hits: 20
E-val: 7.50E-77
Sim: 93.25%
|
XP_018946579.1 LOW QUALITY PROTEIN: transmembrane protein 2-like |
GO:0001947P:heart looping GO:0003190P:atrioventricular valve formation GO:0003197P:endocardial cushion development GO:0003318P:cell migration to the midline involved in heart development GO:0016203P:muscle attachment GO:0030111P:regulation of Wnt signaling pathway GO:0030214P:hyaluronan catabolic process GO:0055008P:cardiac muscle tissue morphogenesis GO:0060974P:cell migration involved in heart formation GO:1900748P:positive regulation of vascular endothelial growth factor signaling pathway GO:1901203P:positive regulation of extracellular matrix assembly GO:1903670P:regulation of sprouting angiogenesis GO:0004415F:hyalurononglucosaminidase activity GO:0005509F:calcium ion binding GO:0030246F:carbohydrate binding GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002045269_503-1204
Len: 701 bp
Hits: 20
E-val: 1.30E-131
Sim: 98.83%
|
XP_018981000.1 homeobox protein SIX3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0021631P:optic nerve morphogenesis GO:0048596P:embryonic camera-type eye morphogenesis GO:0070654P:sensory epithelium regeneration GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180002045463_1-962
Len: 961 bp
Hits: 20
E-val: 6.40E-25
Sim: 100%
|
XP_026099727.1histone-lysine N-methyltransferase 2D-like isoform X6 |
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0044666C:MLL3/4 complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180002045532_387-1085
Len: 698 bp
Hits: 20
E-val: 7.50E-116
Sim: 93.59%
|
XP_026139945.1E3 ubiquitin-protein ligase TRIM71-like |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0000209P:protein polyubiquitination GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010172P:embryonic body morphogenesis GO:0021915P:neural tube development GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051865P:protein autoubiquitination GO:0072089P:stem cell proliferation GO:2000177P:regulation of neural precursor cell proliferation GO:0008270F:zinc ion binding GO:0035198F:miRNA binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body |
Cell Signaling
|
|
SRR953582_primary_scf7180002045550_1-1401
Len: 1,400 bp
Hits: 20
E-val: 1.20E-43
Sim: 95%
|
XP_016117778.1 cadherin-15-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
|
|
SRR953582_primary_scf7180002045575_1-2118
Len: 2,117 bp
Hits: 20
E-val: 2.20E-25
Sim: 89.8%
|
XP_018970964.1 receptor tyrosine-protein kinase erbB-2-like |
GO:0001755P:neural crest cell migration GO:0001837P:epithelial to mesenchymal transition GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007413P:axonal fasciculation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0014044P:Schwann cell development GO:0031101P:fin regeneration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0032285P:non-myelinated axon ensheathment GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048914P:myelination of anterior lateral line nerve axons GO:0048919P:posterior lateral line neuromast development GO:0048932P:myelination of posterior lateral line nerve axons GO:0050679P:positive regulation of epithelial cell proliferation GO:0055003P:cardiac myofibril assembly GO:0060347P:heart trabecula formation GO:0060973P:cell migration involved in heart development GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005634C:nucleus GO:0005769C:early endosome GO:0009925C:basal plasma membrane GO:0032587C:ruffle membrane GO:0043235C:receptor complex GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
|
|
SRR953582_primary_scf7180002045622_1-1708
Len: 1,707 bp
Hits: 20
E-val: 4.70E-18
Sim: 88.98%
|
XP_018978306.1 vasoactive intestinal polypeptide receptor 2-like |
GO:0007166P:cell surface receptor signaling pathway GO:0007188P:adenylate cyclase-modulating G protein-coupled receptor signaling pathway GO:0004999F:vasoactive intestinal polypeptide receptor activity GO:0008528F:G protein-coupled peptide receptor activity GO:0017046F:peptide hormone binding GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002045638_413-1279
Len: 866 bp
Hits: 20
E-val: 1.20E-14
Sim: 57.25%
|
XP_016090756.1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial-like isoform X1 |
Other
|
|
|
SRR953582_primary_scf7180002045666_665-2222
Len: 1,557 bp
Hits: 20
E-val: 9.00E-61
Sim: 76.21%
|
RXN03481.1lethal(2) giant larvae -like protein |
GO:0001947P:heart looping GO:0003171P:atrioventricular valve development GO:0003407P:neural retina development GO:0006893P:Golgi to plasma membrane transport GO:0008593P:regulation of Notch signaling pathway GO:0030031P:cell projection assembly GO:0030866P:cortical actin cytoskeleton organization GO:0032878P:regulation of establishment or maintenance of cell polarity GO:0048919P:posterior lateral line neuromast development GO:0051294P:establishment of spindle orientation GO:0060887P:limb epidermis development GO:0005096F:GTPase activator activity GO:0045159F:myosin II binding GO:0016323C:basolateral plasma membrane GO:0030864C:cortical actin cytoskeleton |
Cell Signaling
|
|
SRR953582_primary_scf7180002045769_1-1048
Len: 1,047 bp
Hits: 20
E-val: 9.50E-30
Sim: 55.97%
|
XP_017558106.1 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 |
GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005768C:endosome GO:0010008C:endosome membrane GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180002045892_1-1662
Len: 1,661 bp
Hits: 20
E-val: 6.50E-25
Sim: 74.95%
|
XP_018943736.1 DNA topoisomerase 1-like, partial |
GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0048511P:rhythmic process GO:0003677F:DNA binding GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0005694C:chromosome GO:0005730C:nucleolus |
DNA Metabolism
|
|
SRR953582_primary_scf7180002045897_593-1354
Len: 761 bp
Hits: 20
E-val: 1.00E-142
Sim: 91.09%
|
XP_018941508.1 gap junction beta-4 protein-like |
GO:0007267P:cell-cell signaling GO:0055085P:transmembrane transport GO:0005243F:gap junction channel activity GO:0005922C:connexin complex |
Cell Signaling
|
|
SRR953582_primary_scf7180002046036_1-1754
Len: 1,753 bp
Hits: 20
E-val: 5.60E-35
Sim: 99.14%
|
XP_018964237.1 ectonucleoside triphosphate diphosphohydrolase 4-like |
GO:0006256P:UDP catabolic process GO:0007034P:vacuolar transport GO:0046036P:CTP metabolic process GO:0004382F:GDP phosphatase activity GO:0005524F:ATP binding GO:0017111F:ribonucleoside triphosphate phosphatase activity GO:0045134F:UDP phosphatase activity GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Metabolism
|
|
SRR953582_primary_scf7180002046067_1-1767
Len: 1,766 bp
Hits: 20
E-val: 1.10E-27
Sim: 77.32%
|
XP_018944920.1 ceramide synthase 1-like |
GO:0046513P:ceramide biosynthetic process GO:0050291F:sphingosine N-acyltransferase activity GO:0016020C:membrane |
Other
|
|
SRR953582_primary_scf7180002046239_1-1263
Len: 1,262 bp
Hits: 20
E-val: 7.10E-32
Sim: 55.53%
|
XP_016119818.1 chromodomain-helicase-DNA-binding protein 4-like, partial |
GO:0004386F:helicase activity GO:0005488F:binding GO:0008094F:ATP-dependent activity, acting on DNA GO:0016787F:hydrolase activity |
DNA Metabolism
|
|
SRR953582_primary_scf7180002046309_1-2181
Len: 2,180 bp
Hits: 20
E-val: 3.90E-46
Sim: 89.62%
|
XP_018954865.1 E3 ubiquitin-protein ligase TRIM33-like |
GO:0016567P:protein ubiquitination GO:0030218P:erythrocyte differentiation GO:0030593P:neutrophil chemotaxis GO:0033333P:fin development GO:0034243P:regulation of transcription elongation by RNA polymerase II GO:0035166P:post-embryonic hemopoiesis GO:0048066P:developmental pigmentation GO:0048246P:macrophage chemotaxis GO:0060215P:primitive hemopoiesis GO:1990822P:basic amino acid transmembrane transport GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0015174F:basic amino acid transmembrane transporter activity GO:0016740F:transferase activity GO:0016874F:ligase activity GO:0043565F:sequence-specific DNA binding GO:0000785C:chromatin GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
|
|
SRR953582_primary_scf7180002046323_1-1259
Len: 1,258 bp
Hits: 20
E-val: 2.40E-27
Sim: 56.47%
|
XP_018945941.1 PHD finger protein 10 |
GO:0007399P:nervous system development GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0071564C:npBAF complex |
Other
|
|
SRR953582_primary_scf7180002046416_1-605
Len: 604 bp
Hits: 20
E-val: 3.20E-46
Sim: 99.02%
|
XP_018945610.1 CDK5 and ABL1 enzyme substrate 1-like |
Other
|
|
|
SRR953582_primary_scf7180002046434_1-1065
Len: 1,064 bp
Hits: 20
E-val: 1.70E-42
Sim: 93.96%
|
XP_016093907.1 zinc finger protein 704 isoform X3 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180002046471_1-1495
Len: 1,494 bp
Hits: 20
E-val: 5.80E-57
Sim: 91.56%
|
XP_018947590.1 short transient receptor potential channel 4-like |
GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0015279F:store-operated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005886C:plasma membrane GO:0034703C:cation channel complex |
Ion Transport
|
|
SRR953582_primary_scf7180002046473_189-1068
Len: 879 bp
Hits: 20
E-val: 6.70E-29
Sim: 72.98%
|
XP_018944722.1 calpain-1 catalytic subunit-like, partial |
GO:0006508P:proteolysis GO:0030216P:keratinocyte differentiation GO:0043066P:negative regulation of apoptotic process GO:0004198F:calcium-dependent cysteine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
Protein Degradation
|
|
SRR953582_primary_scf7180002046847_1-1429
Len: 1,428 bp
Hits: 20
E-val: 1.30E-255
Sim: 88.1%
|
XP_018975582.1 zinc finger and BTB domain-containing protein 2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0070131P:positive regulation of mitochondrial translation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005739C:mitochondrion |
Transcription Regulation
|
|
SRR953582_primary_scf7180002046921_1-1922
Len: 1,921 bp
Hits: 20
E-val: 1.40E-23
Sim: 98.47%
|
XP_026063324.1liprin-alpha-3-like isoform X1 |
GO:0001944P:vasculature development GO:0050808P:synapse organization GO:0005737C:cytoplasm GO:0048786C:presynaptic active zone |
Other
|
|
SRR953582_primary_scf7180002046934_1-1231
Len: 1,230 bp
Hits: 20
E-val: 2.10E-20
Sim: 98.18%
|
XP_016339455.1 neogenin-like isoform X1 |
GO:0098609P:cell-cell adhesion GO:0016020C:membrane |
Other
|