Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002049561_1-772
Len: 771 bp
Hits: 20
E-val: 5.50E-35
Sim: 70.99%
|
CAG05368.1unnamed protein product, partial |
GO:0009060P:aerobic respiration GO:0044238P:primary metabolic process GO:0016624F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
Metabolism
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SRR953582_primary_scf7180002049562_515-1012
Len: 497 bp
Hits: 20
E-val: 1.60E-88
Sim: 96.43%
|
XP_018969534.1 LOW QUALITY PROTEIN: cytochrome P450 1B1-like |
GO:0001654P:eye development GO:0042446P:hormone biosynthetic process GO:0042448P:progesterone metabolic process GO:0004508F:steroid 17-alpha-monooxygenase activity GO:0005506F:iron ion binding GO:0020037F:heme binding GO:0070330F:aromatase activity GO:0005789C:endoplasmic reticulum membrane |
Metabolism
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SRR953582_primary_scf7180002049638_1-1296
Len: 1,295 bp
Hits: 20
E-val: 3.20E-35
Sim: 98.27%
|
XP_018966825.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like |
GO:0016567P:protein ubiquitination GO:0072344P:rescue of stalled ribosome GO:1990116P:ribosome-associated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0043023F:ribosomal large subunit binding GO:0061630F:ubiquitin protein ligase activity GO:0005829C:cytosol GO:1990112C:RQC complex |
DNA Metabolism
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SRR953582_primary_scf7180002049668_231-935
Len: 704 bp
Hits: 20
E-val: 5.00E-19
Sim: 90.57%
|
CAF98481.1unnamed protein product, partial |
GO:0001707P:mesoderm formation GO:0001843P:neural tube closure GO:0003091P:renal water homeostasis GO:0006397P:mRNA processing GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007193P:adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway GO:0018105P:peptidyl-serine phosphorylation GO:0030901P:midbrain development GO:0032024P:positive regulation of insulin secretion GO:0034380P:high-density lipoprotein particle assembly GO:0034605P:cellular response to heat GO:0045542P:positive regulation of cholesterol biosynthetic process GO:0045667P:regulation of osteoblast differentiation GO:0045722P:positive regulation of gluconeogenesis GO:0045879P:negative regulation of smoothened signaling pathway GO:0046827P:positive regulation of protein export from nucleus GO:0048240P:sperm capacitation GO:0051726P:regulation of cell cycle GO:0061136P:regulation of proteasomal protein catabolic process GO:0061351P:neural precursor cell proliferation GO:0070417P:cellular response to cold GO:0070613P:regulation of protein processing GO:0071333P:cellular response to glucose stimulus GO:0071374P:cellular response to parathyroid hormone stimulus GO:0071377P:cellular response to glucagon stimulus GO:0097700P:vascular endothelial cell response to laminar fluid shear stress GO:0099170P:postsynaptic modulation of chemical synaptic transmission GO:1904262P:negative regulation of TORC1 signaling GO:1904539P:negative regulation of glycolytic process through fructose-6-phosphate GO:1990044P:protein localization to lipid droplet GO:2000810P:regulation of bicellular tight junction assembly GO:0000287F:magnesium ion binding GO:0004691F:cAMP-dependent protein kinase activity GO:0004712F:protein serine/threonine/tyrosine kinase activity GO:0005524F:ATP binding GO:0019901F:protein kinase binding GO:0019904F:protein domain specific binding GO:0030145F:manganese ion binding GO:0031625F:ubiquitin protein ligase binding GO:0034237F:protein kinase A regulatory subunit binding GO:0106310F:protein serine kinase activity GO:0001669C:acrosomal vesicle GO:0005739C:mitochondrion GO:0005813C:centrosome GO:0005829C:cytosol GO:0005930C:axoneme GO:0005952C:cAMP-dependent protein kinase complex GO:0016607C:nuclear speck GO:0031594C:neuromuscular junction GO:0036126C:sperm flagellum GO:0044853C:plasma membrane raft GO:0048471C:perinuclear region of cytoplasm GO:0097546C:ciliary base GO:0098794C:postsynapse GO:0098978C:glutamatergic synapse |
Signal Transduction
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SRR953582_primary_scf7180002050002_1-1127
Len: 1,126 bp
Hits: 20
E-val: 9.70E-65
Sim: 79.91%
|
XP_018952913.1 clathrin heavy chain 1-like |
GO:0000278P:mitotic cell cycle GO:0006886P:intracellular protein transport GO:0006898P:receptor-mediated endocytosis GO:0048268P:clathrin coat assembly GO:0005198F:structural molecule activity GO:0032051F:clathrin light chain binding GO:0005819C:spindle GO:0030130C:clathrin coat of trans-Golgi network vesicle GO:0030132C:clathrin coat of coated pit GO:0045334C:clathrin-coated endocytic vesicle GO:0070062C:extracellular exosome GO:0071439C:clathrin complex |
Cell Signaling
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SRR953582_primary_scf7180002050153_1-561
Len: 560 bp
Hits: 20
E-val: 1.60E-20
Sim: 92.86%
|
XP_026138057.1unconventional myosin-XVIIIa-like isoform X5 |
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0003774F:cytoskeletal motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Other
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SRR953582_primary_scf7180002050254_1-339
Len: 338 bp
Hits: 20
E-val: 5.90E-18
Sim: 100%
|
NP_997766.1survival of motor neuron-related-splicing factor 30 |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0003723F:RNA binding GO:0005737C:cytoplasm GO:0015030C:Cajal body GO:0016607C:nuclear speck GO:0071011C:precatalytic spliceosome |
Other
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SRR953582_primary_scf7180002050334_1-1950
Len: 1,949 bp
Hits: 20
E-val: 4.00E-50
Sim: 59.27%
|
XP_018932725.1 LOW QUALITY PROTEIN: aldehyde oxidase 1-like |
GO:0004854F:xanthine dehydrogenase activity GO:0005506F:iron ion binding GO:0043546F:molybdopterin cofactor binding GO:0051537F:2 iron, 2 sulfur cluster binding GO:0071949F:FAD binding GO:0005777C:peroxisome |
Other
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SRR953582_primary_scf7180002050380_1-1308
Len: 1,307 bp
Hits: 20
E-val: 4.10E-22
Sim: 96.36%
|
XP_026139718.1casein kinase I isoform X1 |
GO:0006338P:chromatin remodeling GO:0008643P:carbohydrate transport GO:0016055P:Wnt signaling pathway GO:0043474P:pigment metabolic process involved in pigmentation GO:0048021P:regulation of melanin biosynthetic process GO:0055085P:transmembrane transport GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0015293F:symporter activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002050654_1-1030
Len: 1,029 bp
Hits: 20
E-val: 2.00E-56
Sim: 82.87%
|
XP_016131655.1 retinal guanylyl cyclase 2-like |
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0007601P:visual perception GO:0035556P:intracellular signal transduction GO:0035845P:photoreceptor cell outer segment organization GO:0001653F:peptide receptor activity GO:0004016F:adenylate cyclase activity GO:0004383F:guanylate cyclase activity GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002050801_335-1226
Len: 891 bp
Hits: 20
E-val: 3.80E-56
Sim: 82.52%
|
XP_026074274.1E3 ubiquitin-protein ligase MYCBP2-like isoform X10 |
GO:0007411P:axon guidance GO:0008582P:regulation of synaptic assembly at neuromuscular junction GO:0016567P:protein ubiquitination GO:0019222P:regulation of metabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0030424C:axon |
Metabolism
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SRR953582_primary_scf7180002050824_1-2181
Len: 2,180 bp
Hits: 20
E-val: 1.70E-52
Sim: 51.38%
|
XP_018951425.1 anoctamin-5-like isoform X2 |
GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0046983F:protein dimerization activity GO:0005886C:plasma membrane GO:0016020C:membrane |
Ion Transport
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SRR953582_primary_scf7180002050880_1-602
Len: 601 bp
Hits: 20
E-val: 8.40E-23
Sim: 86.45%
|
XP_026058679.1bromodomain-containing protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180002050956_1-1736
Len: 1,735 bp
Hits: 20
E-val: 3.00E-12
Sim: 97.85%
|
XP_016352262.1 neuron navigator 1-like |
GO:0001578P:microtubule bundle formation GO:0001764P:neuron migration GO:0016887F:ATP hydrolysis activity GO:0015630C:microtubule cytoskeleton GO:0043194C:axon initial segment |
Other
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SRR953582_primary_scf7180002051078_1-554
Len: 553 bp
Hits: 20
E-val: 1.60E-07
Sim: 92.06%
|
XP_026092454.1hepatocyte nuclear factor 4-alpha-like isoform X2 |
GO:0006355P:regulation of DNA-templated transcription GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003707F:nuclear steroid receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180002051102_1-1215
Len: 1,214 bp
Hits: 20
E-val: 5.60E-42
Sim: 57.2%
|
XP_026058758.1centrosomal protein of 152 kDa-like isoform X1 |
GO:0007099P:centriole replication GO:0005813C:centrosome |
Other
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SRR953582_primary_scf7180002051192_485-1337
Len: 852 bp
Hits: 20
E-val: 9.70E-33
Sim: 90.76%
|
RXN06622.1regulating synaptic membrane exocytosis 3 |
GO:0016081P:synaptic vesicle docking GO:0016082P:synaptic vesicle priming GO:0042391P:regulation of membrane potential GO:0048167P:regulation of synaptic plasticity GO:0048790P:maintenance of presynaptic active zone structure GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0050806P:positive regulation of synaptic transmission GO:2000300P:regulation of synaptic vesicle exocytosis GO:0031267F:small GTPase binding GO:0044325F:transmembrane transporter binding GO:0098882F:structural constituent of presynaptic active zone GO:0042734C:presynaptic membrane GO:0048788C:cytoskeleton of presynaptic active zone |
Membrane Transport
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SRR953582_primary_scf7180002051209_23-1107
Len: 1,084 bp
Hits: 20
E-val: 1.00E-34
Sim: 91.46%
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XP_018950239.1 receptor tyrosine-protein kinase erbB-4-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0009966P:regulation of signal transduction GO:0022008P:neurogenesis GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002051304_1-1282
Len: 1,281 bp
Hits: 20
E-val: 7.80E-26
Sim: 97.57%
|
XP_026145896.1protein shisa-6-like isoform X1 |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0048172P:regulation of short-term neuronal synaptic plasticity GO:0097112P:gamma-aminobutyric acid receptor clustering GO:0050811F:GABA receptor binding GO:0014069C:postsynaptic density GO:0032281C:AMPA glutamate receptor complex GO:0032591C:dendritic spine membrane GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002051401_1-1001
Len: 1,000 bp
Hits: 20
E-val: 7.30E-64
Sim: 61.68%
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XP_016091757.1 visual system homeobox 1-like isoform X1 |
GO:0021501P:prechordal plate formation GO:0030900P:forebrain development GO:0045892P:negative regulation of DNA-templated transcription GO:0048329P:negative regulation of axial mesodermal cell fate specification GO:0048348P:paraxial mesodermal cell fate specification GO:0000976F:transcription cis-regulatory region binding GO:0003682F:chromatin binding |
Transcription Regulation
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SRR953582_primary_scf7180002051425_1-1029
Len: 1,028 bp
Hits: 20
E-val: 1.40E-17
Sim: 89.41%
|
XP_026057588.1LOW QUALITY PROTEIN: protein kinase C-binding protein NELL2-like |
GO:0048731P:system development GO:0005080F:protein kinase C binding GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0016301F:kinase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002051465_200-762
Len: 562 bp
Hits: 20
E-val: 7.00E-56
Sim: 89.47%
|
XP_018931802.1 dynein regulatory complex protein 1 isoform X1 |
GO:0003352P:regulation of cilium movement GO:0060285P:cilium-dependent cell motility GO:0070286P:axonemal dynein complex assembly GO:0005858C:axonemal dynein complex GO:0031514C:motile cilium |
Other
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SRR953582_primary_scf7180002051465_1784-2136
Len: 352 bp
Hits: 20
E-val: 3.10E-17
Sim: 94.61%
|
RXN06289.1dynein regulatory complex 1-like protein |
GO:0003352P:regulation of cilium movement GO:0060285P:cilium-dependent cell motility GO:0070286P:axonemal dynein complex assembly GO:0005858C:axonemal dynein complex GO:0031514C:motile cilium |
Other
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SRR953582_primary_scf7180002051522_1-1120
Len: 1,119 bp
Hits: 20
E-val: 1.90E-12
Sim: 86.46%
|
XP_026135277.1V-type proton ATPase 116 kDa subunit a-like |
GO:0007035P:vacuolar acidification GO:0090304P:nucleic acid metabolic process GO:1902600P:proton transmembrane transport GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0000220C:vacuolar proton-transporting V-type ATPase, V0 domain GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002051612_221-780
Len: 559 bp
Hits: 20
E-val: 1.70E-33
Sim: 69.22%
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XP_018939361.1 Niemann-Pick C1-like protein 1, partial |
GO:0015918P:sterol transport GO:0016020C:membrane |
Other
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