Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002056491_1-1934
Len: 1,933 bp
Hits: 20
E-val: 7.60E-41
Sim: 53.22%
|
XP_026072597.1LOW QUALITY PROTEIN: integrin alpha-11-like |
GO:0007155P:cell adhesion GO:0110165C:cellular anatomical structure |
Other
|
|
SRR953582_primary_scf7180002056683_668-1031
Len: 363 bp
Hits: 20
E-val: 6.20E-29
Sim: 99%
|
XP_018980157.1 sodium bicarbonate transporter-like protein 11 isoform X1 |
GO:0006820P:monoatomic anion transport GO:0015698P:inorganic anion transport GO:0050801P:monoatomic ion homeostasis GO:0055085P:transmembrane transport GO:0005452F:solute:inorganic anion antiporter activity GO:0016323C:basolateral plasma membrane |
Ion Transport
|
|
SRR953582_primary_scf7180002056697_1-1089
Len: 1,088 bp
Hits: 20
E-val: 1.20E-24
Sim: 66.07%
|
XP_016118949.1 phenylalanine--tRNA ligase beta subunit-like, partial |
GO:0006432P:phenylalanyl-tRNA aminoacylation GO:0000287F:magnesium ion binding GO:0003723F:RNA binding GO:0004826F:phenylalanine-tRNA ligase activity GO:0005524F:ATP binding GO:0009328C:phenylalanine-tRNA ligase complex |
DNA Metabolism
|
|
SRR953582_primary_scf7180002056959_642-1432
Len: 790 bp
Hits: 20
E-val: 2.90E-47
Sim: 78.94%
|
XP_018973209.1 LOW QUALITY PROTEIN: ryanodine receptor 2-like |
GO:0006941P:striated muscle contraction GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
Cell Signaling
|
|
SRR953582_primary_scf7180002057133_216-701
Len: 485 bp
Hits: 20
E-val: 1.60E-19
Sim: 96.88%
|
XP_026115163.1mitochondrial glutamate carrier 1-like |
GO:0015813P:L-glutamate transmembrane transport GO:0043490P:malate-aspartate shuttle GO:0070778P:L-aspartate transmembrane transport GO:0005313F:L-glutamate transmembrane transporter activity GO:0015183F:L-aspartate transmembrane transporter activity GO:0005743C:mitochondrial inner membrane |
Membrane Transport
|
|
SRR953582_primary_scf7180002057232_1-1673
Len: 1,672 bp
Hits: 20
E-val: 1.30E-60
Sim: 94.59%
|
XP_018968012.1 probable G-protein coupled receptor 157 |
GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0030552F:cAMP binding GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002057340_830-1350
Len: 520 bp
Hits: 20
E-val: 1.20E-38
Sim: 94.38%
|
RXN22584.1DNA ligase 3 |
GO:0006273P:lagging strand elongation GO:0006310P:DNA recombination GO:0071897P:DNA biosynthetic process GO:0097681P:double-strand break repair via alternative nonhomologous end joining GO:0003677F:DNA binding GO:0003910F:DNA ligase (ATP) activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0070421C:DNA ligase III-XRCC1 complex |
DNA Metabolism
|
|
SRR953582_primary_scf7180002057361_1-713
Len: 712 bp
Hits: 20
E-val: 6.00E-36
Sim: 94.69%
|
XP_026069411.1VWFA and cache domain-containing protein 1-like |
GO:0060536P:cartilage morphogenesis GO:0070588P:calcium ion transmembrane transport GO:0005245F:voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex |
Ion Transport
|
|
SRR953582_primary_scf7180002057415_1-954
Len: 953 bp
Hits: 20
E-val: 1.80E-27
Sim: 97.92%
|
XP_018964047.1 lysine-specific demethylase 5B-B |
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR953582_primary_scf7180002057433_334-1165
Len: 831 bp
Hits: 20
E-val: 1.50E-30
Sim: 99.13%
|
XP_018971887.1 protein-tyrosine kinase 2-beta-like |
GO:0007172P:signal complex assembly GO:0008284P:positive regulation of cell population proliferation GO:0051128P:regulation of cellular component organization GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0042995C:cell projection |
Signal Transduction
|
|
SRR953582_primary_scf7180002057493_1-1005
Len: 1,004 bp
Hits: 20
E-val: 2.10E-18
Sim: 81.79%
|
RXN27127.1glutamate receptor 1-like isoform X2 |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002057499_1-982
Len: 981 bp
Hits: 20
E-val: 3.50E-26
Sim: 61.36%
|
XP_018934917.1 beta-1,4 N-acetylgalactosaminyltransferase 1-like |
GO:0006047P:UDP-N-acetylglucosamine metabolic process GO:0007186P:G protein-coupled receptor signaling pathway GO:0019276P:UDP-N-acetylgalactosamine metabolic process GO:0008376F:acetylgalactosaminyltransferase activity GO:0031681F:G-protein beta-subunit binding GO:0005834C:heterotrimeric G-protein complex |
Cell Signaling
|
|
SRR953582_primary_scf7180002057510_1-754
Len: 753 bp
Hits: 20
E-val: 9.80E-29
Sim: 91.07%
|
XP_016403284.1 peptidyl-prolyl cis-trans isomerase FKBP10-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006457P:protein folding GO:0005509F:calcium ion binding GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0005783C:endoplasmic reticulum |
Transcription Regulation
|
|
SRR953582_primary_scf7180002057612_891-1127
Len: 236 bp
Hits: 20
E-val: 4.50E-33
Sim: 98.12%
|
XP_016106357.1 Na(+)/H(+) exchange regulatory cofactor NHE-RF2-like |
GO:0072659P:protein localization to plasma membrane GO:0005102F:signaling receptor binding GO:0043495F:protein-membrane adaptor activity GO:0012505C:endomembrane system GO:0016324C:apical plasma membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002057884_148-1600
Len: 1,452 bp
Hits: 20
E-val: 2.10E-35
Sim: 99.44%
|
CAD60809.1novel protein similar to human ionotrophic glutamate receptor AMPA 3 (GRIA3), partial |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
|
|
SRR953582_primary_scf7180002057885_1-1409
Len: 1,408 bp
Hits: 20
E-val: 9.10E-28
Sim: 100%
|
XP_026082176.1unconventional myosin-XVIIIa-like isoform X2 |
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0003774F:cytoskeletal motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Other
|
|
SRR953582_primary_scf7180002058065_1-398
Len: 397 bp
Hits: 20
E-val: 1.20E-20
Sim: 92.22%
|
NP_956288.1transcription elongation factor A protein 1 |
GO:0006368P:transcription elongation by RNA polymerase II GO:0006414P:translational elongation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0003746F:translation elongation factor activity GO:0008270F:zinc ion binding GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
|
|
SRR953582_primary_scf7180002058122_468-1962
Len: 1,494 bp
Hits: 20
E-val: 6.70E-21
Sim: 99.2%
|
XP_018944404.1 LOW QUALITY PROTEIN: dynactin subunit 2-like |
GO:0001754P:eye photoreceptor cell differentiation GO:0007052P:mitotic spindle organization GO:0007097P:nuclear migration GO:0010001P:glial cell differentiation GO:0030719P:P granule organization GO:0035088P:establishment or maintenance of apical/basal cell polarity GO:0045494P:photoreceptor cell maintenance GO:0060117P:auditory receptor cell development GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005869C:dynactin complex GO:0005874C:microtubule GO:0016020C:membrane GO:0030286C:dynein complex GO:0031982C:vesicle |
Cell Signaling
|
|
SRR953582_primary_scf7180002058142_1-605
Len: 604 bp
Hits: 20
E-val: 3.40E-16
Sim: 90.82%
|
XP_018977798.1 protein diaphanous homolog 1-like |
GO:0030041P:actin filament polymerization GO:0003779F:actin binding GO:0031267F:small GTPase binding GO:0005884C:actin filament |
Other
|
|
SRR953582_primary_scf7180002058160_1-1095
Len: 1,094 bp
Hits: 20
E-val: 1.40E-47
Sim: 76.69%
|
XP_018967804.1 formin-like protein 1 |
GO:0008360P:regulation of cell shape GO:0016477P:cell migration GO:0030866P:cortical actin cytoskeleton organization GO:0051015F:actin filament binding GO:0005829C:cytosol |
Other
|
|
SRR953582_primary_scf7180002058211_1-713
Len: 712 bp
Hits: 20
E-val: 4.50E-23
Sim: 99.5%
|
AAH53158.1Malate dehydrogenase 1a, NAD (soluble) |
GO:0006099P:tricarboxylic acid cycle GO:0006107P:oxaloacetate metabolic process GO:0006108P:malate metabolic process GO:0030060F:L-malate dehydrogenase (NAD+) activity GO:0005829C:cytosol |
Metabolism
|
|
SRR953582_primary_scf7180002058212_47-1331
Len: 1,284 bp
Hits: 20
E-val: 5.40E-27
Sim: 93.21%
|
XP_016367082.1 tyrosine 3-monooxygenase-like |
GO:0006585P:dopamine biosynthetic process from tyrosine GO:0021522P:spinal cord motor neuron differentiation GO:0004511F:tyrosine 3-monooxygenase activity GO:0005506F:iron ion binding GO:0030424C:axon GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
Other
|
|
SRR953582_primary_scf7180002058272_759-1150
Len: 391 bp
Hits: 20
E-val: 8.70E-37
Sim: 98.84%
|
CDQ67629.1unnamed protein product |
GO:0006508P:proteolysis GO:0007265P:Ras protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008234F:cysteine-type peptidase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Protein Degradation
|
|
SRR953582_primary_scf7180002058331_1-1410
Len: 1,409 bp
Hits: 20
E-val: 8.30E-13
Sim: 96.03%
|
XP_026074274.1E3 ubiquitin-protein ligase MYCBP2-like isoform X10 |
GO:0008582P:regulation of synaptic assembly at neuromuscular junction GO:0016198P:axon choice point recognition GO:0016567P:protein ubiquitination GO:0021952P:central nervous system projection neuron axonogenesis GO:0021986P:habenula development GO:0031290P:retinal ganglion cell axon guidance GO:0032922P:circadian regulation of gene expression GO:0048066P:developmental pigmentation GO:0048677P:axon extension involved in regeneration GO:0050905P:neuromuscular process GO:1902667P:regulation of axon guidance GO:0005085F:guanyl-nucleotide exchange factor activity GO:0008270F:zinc ion binding GO:0031267F:small GTPase binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0030424C:axon |
DNA Metabolism
|
|
SRR953582_primary_scf7180002058445_384-687
Len: 303 bp
Hits: 20
E-val: 6.30E-19
Sim: 92.26%
|
XP_018942491.1 cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like |
GO:0006123P:mitochondrial electron transport, cytochrome c to oxygen GO:0005743C:mitochondrial inner membrane GO:0045277C:respiratory chain complex IV |
Other
|