Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002063608_1-1432
Len: 1,431 bp
Hits: 20
E-val: 2.00E-38
Sim: 56.62%
|
XP_026132018.1E3 ubiquitin-protein ligase BRE1B-like isoform X2 |
GO:0006325P:chromatin organization GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0016874F:ligase activity GO:0046872F:metal ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0033503C:HULC complex |
DNA Metabolism
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SRR953582_primary_scf7180002063649_1-1307
Len: 1,306 bp
Hits: 20
E-val: 1.70E-52
Sim: 95.44%
|
XP_026059437.1transcription initiation factor TFIID subunit 5-like |
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0006413P:translational initiation GO:0003743F:translation initiation factor activity GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0000124C:SAGA complex GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR953582_primary_scf7180002063688_1-1732
Len: 1,731 bp
Hits: 20
E-val: 3.80E-36
Sim: 94.53%
|
XP_018970641.1 abl interactor 1-like |
GO:0001764P:neuron migration GO:0017124F:SH3 domain binding GO:0035591F:signaling adaptor activity GO:0005856C:cytoskeleton GO:0030027C:lamellipodium GO:0030175C:filopodium GO:0031209C:SCAR complex |
Cell Signaling
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SRR953582_primary_scf7180002063860_66-842
Len: 776 bp
Hits: 20
E-val: 8.30E-31
Sim: 96.34%
|
XP_016399725.1 cytochrome P450 2D17-like |
GO:0006082P:organic acid metabolic process GO:0006805P:xenobiotic metabolic process GO:0005506F:iron ion binding GO:0016279F:protein-lysine N-methyltransferase activity GO:0016712F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen GO:0020037F:heme binding GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
Metabolism
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SRR953582_primary_scf7180002063899_1-1854
Len: 1,853 bp
Hits: 20
E-val: 2.80E-24
Sim: 73.75%
|
XP_018936624.1 probable phospholipid-transporting ATPase IIB |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006897P:endocytosis GO:0045332P:phospholipid translocation GO:0043167F:ion binding GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002064416_1-865
Len: 864 bp
Hits: 20
E-val: 2.10E-27
Sim: 99.06%
|
XP_016092134.1 RNA-binding protein 10-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0003723F:RNA binding GO:0003924F:GTPase activity GO:0005509F:calcium ion binding GO:0005525F:GTP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002064422_1-995
Len: 994 bp
Hits: 20
E-val: 2.60E-21
Sim: 88.03%
|
XP_018943599.1 FERM domain-containing protein 6-like, partial |
GO:0035332P:positive regulation of hippo signaling GO:0005856C:cytoskeleton GO:0098592C:cytoplasmic side of apical plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002064483_132-1282
Len: 1,150 bp
Hits: 20
E-val: 1.70E-19
Sim: 99.84%
|
RXN02711.1U8 snoRNA-decapping enzyme-like protein |
GO:0006402P:mRNA catabolic process GO:0007165P:signal transduction GO:0009117P:nucleotide metabolic process GO:0016077P:sno(s)RNA catabolic process GO:0005096F:GTPase activator activity GO:0030515F:snoRNA binding GO:1990174F:phosphodiesterase decapping endonuclease activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus |
Metabolism
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SRR953582_primary_scf7180002064778_1-939
Len: 938 bp
Hits: 20
E-val: 3.80E-38
Sim: 50.55%
|
XP_026103605.1phosphatidylinositol 4-kinase type 2-alpha-like |
GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR953582_primary_scf7180002064833_1-1225
Len: 1,224 bp
Hits: 20
E-val: 7.90E-20
Sim: 94.02%
|
XP_018931416.1 aquaporin-4-like |
GO:0006833P:water transport GO:0055085P:transmembrane transport GO:0015250F:water channel activity GO:0005886C:plasma membrane |
Ion Transport
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SRR953582_primary_scf7180002064834_1-1319
Len: 1,318 bp
Hits: 20
E-val: 1.50E-48
Sim: 60.58%
|
XP_016395357.1 bestrophin-4-like |
GO:0006821P:chloride transport GO:0034220P:monoatomic ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0015267F:channel activity GO:0005886C:plasma membrane GO:0034707C:chloride channel complex |
Ion Transport
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SRR953582_primary_scf7180002064849_1-724
Len: 723 bp
Hits: 20
E-val: 2.00E-18
Sim: 96.23%
|
XP_016419500.1 espin-like |
GO:0007605P:sensory perception of sound GO:0051017P:actin filament bundle assembly GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0032420C:stereocilium |
Other
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SRR953582_primary_scf7180002065061_1-236
Len: 235 bp
Hits: 20
E-val: 8.00E-38
Sim: 95.51%
|
XP_016097930.1 protein FAM89A |
GO:0006974P:DNA damage response GO:0003697F:single-stranded DNA binding GO:0004222F:metalloendopeptidase activity GO:0031593F:polyubiquitin modification-dependent protein binding GO:0005634C:nucleus |
Protein Degradation
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SRR953582_primary_scf7180002065111_481-1048
Len: 567 bp
Hits: 20
E-val: 1.00E-33
Sim: 98.68%
|
NP_956632.1AP-4 complex subunit beta-1 |
GO:0006886P:intracellular protein transport GO:0016192P:vesicle-mediated transport GO:0030276F:clathrin binding GO:0012505C:endomembrane system GO:0030131C:clathrin adaptor complex |
Other
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SRR953582_primary_scf7180002065372_1-789
Len: 788 bp
Hits: 20
E-val: 4.80E-26
Sim: 94.33%
|
XP_016094170.1 lethal(3)malignant brain tumor-like protein 1 |
GO:0006325P:chromatin organization GO:0045892P:negative regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0042393F:histone binding GO:0005634C:nucleus |
Signal Transduction
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SRR953582_primary_scf7180002065606_346-1040
Len: 694 bp
Hits: 20
E-val: 2.50E-39
Sim: 67.34%
|
XP_018919377.1 D-dopachrome decarboxylase-A-like |
GO:0008152P:metabolic process GO:0043066P:negative regulation of apoptotic process GO:0048839P:inner ear development GO:0003824F:catalytic activity GO:0110165C:cellular anatomical structure |
Metabolism
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SRR953582_primary_scf7180002065729_1-1377
Len: 1,376 bp
Hits: 20
E-val: 9.50E-14
Sim: 85.29%
|
XP_016353863.1 centrosomal protein of 120 kDa-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010825P:positive regulation of centrosome duplication GO:0021987P:cerebral cortex development GO:0022008P:neurogenesis GO:0022027P:interkinetic nuclear migration GO:0030953P:astral microtubule organization GO:0045724P:positive regulation of cilium assembly GO:1903724P:positive regulation of centriole elongation GO:1904951P:positive regulation of establishment of protein localization GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005813C:centrosome GO:0005814C:centriole |
Transcription Regulation
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SRR953582_primary_scf7180002066056_1-730
Len: 729 bp
Hits: 20
E-val: 7.70E-55
Sim: 77.15%
|
XP_018979142.1 NT-3 growth factor receptor-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007417P:central nervous system development GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010976P:positive regulation of neuron projection development GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0038179P:neurotrophin signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:1990090P:cellular response to nerve growth factor stimulus GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0043121F:neurotrophin binding GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0030424C:axon GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002066157_1-1499
Len: 1,498 bp
Hits: 20
E-val: 3.20E-47
Sim: 96.69%
|
XP_016428802.1 protein FAM172A-like isoform X1 |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0031048P:regulatory ncRNA-mediated heterochromatin formation GO:0035197F:siRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002066248_1-727
Len: 726 bp
Hits: 20
E-val: 1.70E-57
Sim: 92.95%
|
XP_018961524.1 low-density lipoprotein receptor-related protein 4 |
GO:0006898P:receptor-mediated endocytosis GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002066255_1-939
Len: 938 bp
Hits: 20
E-val: 6.10E-28
Sim: 90.28%
|
XP_026114247.1N-acetyltransferase ESCO1 |
GO:0007064P:mitotic sister chromatid cohesion GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0061733F:protein-lysine-acetyltransferase activity GO:0000785C:chromatin GO:0005634C:nucleus |
Signal Transduction
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SRR953582_primary_scf7180002066400_1-1630
Len: 1,629 bp
Hits: 20
E-val: 6.00E-23
Sim: 99.73%
|
XP_017552458.1 IQ motif and SEC7 domain-containing protein 3 isoform X1 |
GO:0030036P:actin cytoskeleton organization GO:0032012P:regulation of ARF protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002066401_1-1360
Len: 1,359 bp
Hits: 20
E-val: 6.50E-15
Sim: 94.1%
|
CAG06578.1unnamed protein product, partial |
GO:0007015P:actin filament organization GO:0019722P:calcium-mediated signaling GO:0031175P:neuron projection development GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0014069C:postsynaptic density GO:0015629C:actin cytoskeleton GO:0030425C:dendrite |
Cell Signaling
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SRR953582_primary_scf7180002066778_1-874
Len: 873 bp
Hits: 20
E-val: 6.40E-72
Sim: 64.84%
|
XP_018961245.1 integrin beta-1-like |
GO:0007155P:cell adhesion GO:0032502P:developmental process GO:0005515F:protein binding GO:0005886C:plasma membrane GO:0030054C:cell junction GO:0042995C:cell projection |
Other
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SRR953582_primary_scf7180002066937_519-924
Len: 405 bp
Hits: 20
E-val: 2.90E-27
Sim: 99.18%
|
XP_018969480.1 activin receptor type-1-like |
GO:0001503P:ossification GO:0001525P:angiogenesis GO:0001889P:liver development GO:0001947P:heart looping GO:0003140P:determination of left/right asymmetry in lateral mesoderm GO:0003146P:heart jogging GO:0003230P:cardiac atrium development GO:0003342P:proepicardium development GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0009952P:anterior/posterior pattern specification GO:0021556P:central nervous system formation GO:0030510P:regulation of BMP signaling pathway GO:0032924P:activin receptor signaling pathway GO:0035124P:embryonic caudal fin morphogenesis GO:0035162P:embryonic hemopoiesis GO:0035462P:determination of left/right asymmetry in diencephalon GO:0042476P:odontogenesis GO:0046588P:negative regulation of calcium-dependent cell-cell adhesion GO:0048264P:determination of ventral identity GO:0048332P:mesoderm morphogenesis GO:0051216P:cartilage development GO:0060030P:dorsal convergence GO:0005025F:transforming growth factor beta receptor activity, type I GO:0005026F:transforming growth factor beta receptor activity, type II GO:0005524F:ATP binding GO:0016361F:activin receptor activity, type I GO:0016362F:activin receptor activity, type II GO:0046332F:SMAD binding GO:0070123F:transforming growth factor beta receptor activity, type III GO:0098821F:BMP receptor activity GO:0005938C:cell cortex GO:0070724C:BMP receptor complex |
Cell Signaling
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