Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002148521_592-4140
Len: 3,548 bp
Hits: 20
E-val: 3.40E-47
Sim: 51.24%
|
XP_018923793.1 cyclic nucleotide-gated cation channel beta-1-like |
GO:0001895P:retina homeostasis GO:0098655P:monoatomic cation transmembrane transport GO:0005222F:intracellularly cAMP-activated cation channel activity GO:0005223F:intracellularly cGMP-activated cation channel activity GO:0008270F:zinc ion binding GO:0030553F:cGMP binding GO:0044877F:protein-containing complex binding GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane GO:0017071C:intracellular cyclic nucleotide activated cation channel complex |
Cell Signaling
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SRR953582_primary_scf7180002148558_1666-3183
Len: 1,517 bp
Hits: 20
E-val: 5.50E-180
Sim: 75.5%
|
XP_018965071.1 carboxypeptidase N subunit 2-like |
GO:0006955P:immune response GO:0007179P:transforming growth factor beta receptor signaling pathway GO:0004180F:carboxypeptidase activity GO:0050431F:transforming growth factor beta binding GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002148631_3438-4052
Len: 614 bp
Hits: 20
E-val: 3.20E-102
Sim: 90.56%
|
XP_018967528.1 collagen alpha-4(VI) chain-like isoform X1 |
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005581C:collagen trimer |
Protein Degradation
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SRR953582_primary_scf7180002148684_762-4547
Len: 3,785 bp
Hits: 20
E-val: 0
Sim: 88.27%
|
XP_018943913.1 probable G-protein coupled receptor 179, partial |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0004930F:G protein-coupled receptor activity GO:0043005C:neuron projection GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002148795_1-3691
Len: 3,690 bp
Hits: 20
E-val: 3.00E-54
Sim: 55.16%
|
XP_018918970.1 LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1 |
GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity |
DNA Metabolism
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SRR953582_primary_scf7180002148905_498-1751
Len: 1,253 bp
Hits: 20
E-val: 5.30E-237
Sim: 87.3%
|
XP_018925029.1 P2Y purinoceptor 3-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0008142F:oxysterol binding GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002148933_330-901
Len: 571 bp
Hits: 20
E-val: 1.60E-47
Sim: 93.8%
|
XP_018972465.1 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like |
GO:0031591P:wybutosine biosynthetic process GO:0010181F:FMN binding GO:0046872F:metal ion binding GO:0051539F:4 iron, 4 sulfur cluster binding GO:0102521F:tRNA-4-demethylwyosine synthase activity GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002148933_1908-3044
Len: 1,136 bp
Hits: 10
E-val: 2.50E-07
Sim: 94.9%
|
RXN04025.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1 |
GO:0031591P:wybutosine biosynthetic process GO:0046872F:metal ion binding GO:0051539F:4 iron, 4 sulfur cluster binding GO:0102521F:tRNA-4-demethylwyosine synthase activity |
Other
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SRR953582_primary_scf7180002148934_1-562
Len: 561 bp
Hits: 20
E-val: 2.80E-12
Sim: 98.08%
|
XP_026887177.1anaphase-promoting complex subunit 10 |
GO:0031145P:anaphase-promoting complex-dependent catabolic process GO:0051301P:cell division GO:0070979P:protein K11-linked ubiquitination GO:0005680C:anaphase-promoting complex |
Other
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SRR953582_primary_scf7180002148949_1-4786
Len: 4,785 bp
Hits: 20
E-val: 2.10E-172
Sim: 86.6%
|
XP_018925283.1 uracil nucleotide/cysteinyl leukotriene receptor-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035025P:positive regulation of Rho protein signal transduction GO:0004930F:G protein-coupled receptor activity GO:0008142F:oxysterol binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002148960_2279-3089
Len: 810 bp
Hits: 20
E-val: 3.10E-52
Sim: 94.16%
|
XP_005166128.1sodium channel, voltage gated, type VIII, alpha subunit b isoform X1 |
GO:0019228P:neuronal action potential GO:0035725P:sodium ion transmembrane transport GO:0086010P:membrane depolarization during action potential GO:0005248F:voltage-gated sodium channel activity GO:0005509F:calcium ion binding GO:0001518C:voltage-gated sodium channel complex |
Ion Transport
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SRR953582_primary_scf7180002149033_2252-3385
Len: 1,133 bp
Hits: 20
E-val: 3.10E-204
Sim: 93.98%
|
XP_018930700.1 unconventional myosin-XVI-like |
GO:0043491P:phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0048812P:neuron projection morphogenesis GO:2000134P:negative regulation of G1/S transition of mitotic cell cycle GO:0003774F:cytoskeletal motor activity GO:0005524F:ATP binding GO:0019903F:protein phosphatase binding GO:0051015F:actin filament binding GO:0005654C:nucleoplasm GO:0016459C:myosin complex GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002149039_885-3710
Len: 2,825 bp
Hits: 20
E-val: 3.30E-37
Sim: 99.54%
|
XP_026135044.1neuroendocrine convertase 2-like |
GO:0016486P:peptide hormone processing GO:0004252F:serine-type endopeptidase activity GO:0005615C:extracellular space GO:0016020C:membrane GO:0043005C:neuron projection |
Protein Degradation
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SRR953582_primary_scf7180002149092_495-4268
Len: 3,773 bp
Hits: 20
E-val: 1.70E-33
Sim: 57%
|
XP_026117251.1mevalonate kinase isoform X1 |
GO:0006695P:cholesterol biosynthetic process GO:0008299P:isoprenoid biosynthetic process GO:0019287P:isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0004496F:mevalonate kinase activity GO:0005524F:ATP binding GO:0016301F:kinase activity GO:0016773F:phosphotransferase activity, alcohol group as acceptor GO:0005737C:cytoplasm GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002149114_1-1185
Len: 1,184 bp
Hits: 20
E-val: 3.00E-101
Sim: 94.71%
|
XP_018968152.1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like |
GO:0005975P:carbohydrate metabolic process GO:0016758F:hexosyltransferase activity GO:0046872F:metal ion binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0031982C:vesicle |
Metabolism
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SRR953582_primary_scf7180002149138_1-530
Len: 529 bp
Hits: 20
E-val: 2.40E-13
Sim: 99.63%
|
NP_998019.3Rho family GTPase 1 |
GO:0007015P:actin filament organization GO:0007264P:small GTPase-mediated signal transduction GO:0032956P:regulation of actin cytoskeleton organization GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0005886C:plasma membrane |
Signal Transduction
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SRR953582_primary_scf7180002149153_322-3619
Len: 3,297 bp
Hits: 20
E-val: 4.90E-24
Sim: 97.86%
|
XP_018923624.1 CSC1-like protein 2 isoform X2 |
GO:0098655P:monoatomic cation transmembrane transport GO:0003676F:nucleic acid binding GO:0005227F:calcium-activated cation channel activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
Ion Transport
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SRR953582_primary_scf7180002149173_1-2111
Len: 2,110 bp
Hits: 20
E-val: 3.70E-158
Sim: 77.5%
|
XP_018970400.1 LOW QUALITY PROTEIN: phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like |
GO:0043569P:negative regulation of insulin-like growth factor receptor signaling pathway GO:0046856P:phosphatidylinositol dephosphorylation GO:0050776P:regulation of immune response GO:0004445F:inositol-polyphosphate 5-phosphatase activity GO:0034485F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0016020C:membrane GO:0016607C:nuclear speck GO:0030027C:lamellipodium GO:0030175C:filopodium |
Cell Signaling
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SRR953582_primary_scf7180002149221_307-3906
Len: 3,599 bp
Hits: 20
E-val: 3.80E-22
Sim: 89.41%
|
ADO28057.1pre-mRNA-splicing factor spf27 |
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0000974C:Prp19 complex GO:0071011C:precatalytic spliceosome GO:0071013C:catalytic step 2 spliceosome |
Other
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SRR953582_primary_scf7180002149232_1312-2342
Len: 1,030 bp
Hits: 20
E-val: 2.10E-34
Sim: 87.61%
|
XP_026068237.1phosphatidylserine decarboxylase proenzyme, mitochondrial-like isoform X1 |
GO:0006646P:phosphatidylethanolamine biosynthetic process GO:0016540P:protein autoprocessing GO:0004609F:phosphatidylserine decarboxylase activity GO:0005743C:mitochondrial inner membrane |
Other
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SRR953582_primary_scf7180002149256_1-3794
Len: 3,793 bp
Hits: 20
E-val: 1.50E-29
Sim: 82.61%
|
XP_026092887.1plexin-A4-like |
GO:0001763P:morphogenesis of a branching structure GO:0007411P:axon guidance GO:0007414P:axonal defasciculation GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002149267_2680-4857
Len: 2,177 bp
Hits: 20
E-val: 0
Sim: 87.28%
|
XP_018974671.1 gap junction alpha-8 protein-like |
GO:0007267P:cell-cell signaling GO:0055085P:transmembrane transport GO:1990349P:gap junction-mediated intercellular transport GO:0005243F:gap junction channel activity GO:0005922C:connexin complex |
Cell Signaling
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SRR953582_primary_scf7180002149335_1-3543
Len: 3,542 bp
Hits: 20
E-val: 2.30E-19
Sim: 91.18%
|
XP_022529675.1arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X3 |
GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR953582_primary_scf7180002149339_1108-2187
Len: 1,079 bp
Hits: 20
E-val: 5.80E-200
Sim: 97.16%
|
XP_018958267.1 apelin receptor B-like |
GO:0001570P:vasculogenesis GO:0001702P:gastrulation with mouth forming second GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0008078P:mesodermal cell migration GO:0019722P:calcium-mediated signaling GO:0030593P:neutrophil chemotaxis GO:0035479P:angioblast cell migration from lateral mesoderm to midline GO:0035987P:endodermal cell differentiation GO:0045766P:positive regulation of angiogenesis GO:0048738P:cardiac muscle tissue development GO:0051281P:positive regulation of release of sequestered calcium ion into cytosol GO:0060183P:apelin receptor signaling pathway GO:0060976P:coronary vasculature development GO:0061371P:determination of heart left/right asymmetry GO:0070098P:chemokine-mediated signaling pathway GO:0071910P:determination of liver left/right asymmetry GO:0090162P:establishment of epithelial cell polarity GO:1900107P:regulation of nodal signaling pathway GO:1903589P:positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0060182F:apelin receptor activity GO:0140897F:mechanoreceptor activity GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002149407_1-3952
Len: 3,951 bp
Hits: 20
E-val: 1.20E-72
Sim: 69.64%
|
XP_018954706.1 LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RNF217 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0031624F:ubiquitin conjugating enzyme binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
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