Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002160788_2299-2745
Len: 446 bp
Hits: 20
E-val: 1.10E-85
Sim: 99.36%
|
RXN25726.1Wnt-5b isoform X2 |
GO:0001525P:angiogenesis GO:0001946P:lymphangiogenesis GO:0001958P:endochondral ossification GO:0002062P:chondrocyte differentiation GO:0002574P:thrombocyte differentiation GO:0008591P:regulation of Wnt signaling pathway, calcium modulating pathway GO:0009826P:unidimensional cell growth GO:0010172P:embryonic body morphogenesis GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0030182P:neuron differentiation GO:0031018P:endocrine pancreas development GO:0031101P:fin regeneration GO:0036342P:post-anal tail morphogenesis GO:0042692P:muscle cell differentiation GO:0045165P:cell fate commitment GO:0048703P:embryonic viscerocranium morphogenesis GO:0048840P:otolith development GO:0048884P:neuromast development GO:0051209P:release of sequestered calcium ion into cytosol GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0060070P:canonical Wnt signaling pathway GO:0060536P:cartilage morphogenesis GO:0061053P:somite development GO:0090156P:intracellular sphingolipid homeostasis GO:1904105P:positive regulation of convergent extension involved in gastrulation GO:2000052P:positive regulation of non-canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002160793_1-2052
Len: 2,051 bp
Hits: 20
E-val: 1.60E-28
Sim: 98.47%
|
XP_026138488.1Down syndrome cell adhesion molecule-like protein 1 homolog isoform X2 |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0007417P:central nervous system development GO:0070593P:dendrite self-avoidance GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Other
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SRR953582_primary_scf7180002160812_43-2148
Len: 2,105 bp
Hits: 20
E-val: 1.10E-56
Sim: 58.09%
|
XP_018938034.1 basal body-orientation factor 1-like |
GO:0046599P:regulation of centriole replication GO:0008017F:microtubule binding GO:0005813C:centrosome GO:0005814C:centriole GO:0005829C:cytosol GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002160870_1-2054
Len: 2,053 bp
Hits: 20
E-val: 3.20E-239
Sim: 92.52%
|
XP_018965996.1 FTS and Hook-interacting protein homolog |
GO:0007032P:endosome organization GO:0007040P:lysosome organization GO:0008333P:endosome to lysosome transport GO:0015031P:protein transport GO:0045022P:early endosome to late endosome transport GO:1905719P:protein localization to perinuclear region of cytoplasm GO:0070695C:FHF complex |
Other
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SRR953582_primary_scf7180002160883_1-2358
Len: 2,357 bp
Hits: 20
E-val: 3.90E-39
Sim: 70.83%
|
CAF96601.1unnamed protein product, partial |
GO:0016477P:cell migration GO:0098609P:cell-cell adhesion GO:0008013F:beta-catenin binding GO:0051015F:actin filament binding GO:0005856C:cytoskeleton GO:0005912C:adherens junction GO:0016342C:catenin complex GO:0042995C:cell projection |
Other
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SRR953582_primary_scf7180002160917_1-292
Len: 291 bp
Hits: 20
E-val: 2.60E-17
Sim: 99.15%
|
XP_026128948.1mitogen-activated protein kinase kinase kinase 1-like isoform X2 |
GO:0000165P:MAPK cascade GO:0004709F:MAP kinase kinase kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002160931_1-1807
Len: 1,806 bp
Hits: 20
E-val: 4.30E-30
Sim: 62.93%
|
XP_016384876.1 serine/threonine-protein kinase TAO1-B-like |
GO:0006281P:DNA repair GO:0051493P:regulation of cytoskeleton organization GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002160987_779-2339
Len: 1,560 bp
Hits: 20
E-val: 4.20E-42
Sim: 99.28%
|
XP_010785743.1 transcription initiation factor IIB-like |
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter GO:0006338P:chromatin remodeling GO:0006413P:translational initiation GO:0051123P:RNA polymerase II preinitiation complex assembly GO:1990114P:RNA polymerase II core complex assembly GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0017025F:TBP-class protein binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR953582_primary_scf7180002161087_197-2417
Len: 2,220 bp
Hits: 20
E-val: 6.60E-81
Sim: 94.8%
|
XP_018951786.1 protein Wnt-10b-like, partial |
GO:0030182P:neuron differentiation GO:0030917P:midbrain-hindbrain boundary development GO:0045165P:cell fate commitment GO:0060070P:canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002161126_1-3127
Len: 3,126 bp
Hits: 20
E-val: 2.50E-38
Sim: 72.64%
|
XP_026086925.1GRAM domain-containing protein 1B-like isoform X6 |
GO:0032366P:intracellular sterol transport GO:0015485F:cholesterol binding GO:0120020F:cholesterol transfer activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0140268C:endoplasmic reticulum-plasma membrane contact site |
Other
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SRR953582_primary_scf7180002161262_1310-1777
Len: 467 bp
Hits: 20
E-val: 1.10E-89
Sim: 87.82%
|
XP_018959951.1 secreted frizzled-related protein 1-like |
GO:0030154P:cell differentiation GO:0035567P:non-canonical Wnt signaling pathway GO:0060070P:canonical Wnt signaling pathway GO:0017147F:Wnt-protein binding GO:0005615C:extracellular space |
Cell Signaling
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SRR953582_primary_scf7180002161295_522-2277
Len: 1,755 bp
Hits: 20
E-val: 7.80E-45
Sim: 81.79%
|
XP_018969914.1 coiled-coil and C2 domain-containing protein 1A |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002161338_1-2556
Len: 2,555 bp
Hits: 20
E-val: 1.90E-95
Sim: 99.92%
|
XP_021333010.1nuclear factor 1 X-type-like isoform X3 |
GO:0006260P:DNA replication GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002161347_1-1439
Len: 1,438 bp
Hits: 20
E-val: 2.70E-67
Sim: 93.4%
|
XP_018925100.1 probable phospholipid-transporting ATPase VD |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002161352_1-1026
Len: 1,025 bp
Hits: 20
E-val: 6.90E-17
Sim: 69.18%
|
XP_016149154.1 UBX domain-containing protein 1-like |
GO:0031397P:negative regulation of protein ubiquitination GO:0032435P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:1903094P:negative regulation of protein K48-linked deubiquitination GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002161425_437-1144
Len: 707 bp
Hits: 20
E-val: 5.80E-132
Sim: 97.12%
|
XP_018953139.1 rhodopsin kinase |
GO:0006355P:regulation of DNA-templated transcription GO:0007601P:visual perception GO:0022400P:regulation of opsin-mediated signaling pathway GO:1902600P:proton transmembrane transport GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0015297F:antiporter activity GO:0050254F:rhodopsin kinase activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002161433_1022-1690
Len: 668 bp
Hits: 20
E-val: 1.70E-112
Sim: 94.16%
|
RXN15555.1neuron navigator 1-like protein |
GO:0001578P:microtubule bundle formation GO:0001764P:neuron migration GO:0016887F:ATP hydrolysis activity GO:0015630C:microtubule cytoskeleton GO:0043194C:axon initial segment |
Other
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SRR953582_primary_scf7180002161453_2694-3136
Len: 442 bp
Hits: 20
E-val: 8.10E-15
Sim: 99.78%
|
XP_016325508.1 BTB/POZ domain-containing protein 3-like |
GO:0021987P:cerebral cortex development GO:0048813P:dendrite morphogenesis GO:0042802F:identical protein binding GO:0005634C:nucleus GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180002161459_1-1417
Len: 1,416 bp
Hits: 20
E-val: 1.20E-213
Sim: 98.86%
|
RXN07212.1netrin-1-like isoform X1 |
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001947P:heart looping GO:0003146P:heart jogging GO:0008045P:motor neuron axon guidance GO:0016358P:dendrite development GO:0016525P:negative regulation of angiogenesis GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0030878P:thyroid gland development GO:0033564P:anterior/posterior axon guidance GO:0035908P:ventral aorta development GO:0048665P:neuron fate specification GO:0048846P:axon extension involved in axon guidance GO:0061386P:closure of optic fissure GO:0061626P:pharyngeal arch artery morphogenesis GO:0071678P:olfactory bulb axon guidance GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002161520_1-490
Len: 489 bp
Hits: 20
E-val: 2.60E-54
Sim: 98.39%
|
XP_026140648.1synaptotagmin-11-like |
GO:0017158P:regulation of calcium ion-dependent exocytosis GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0099502P:calcium-dependent activation of synaptic vesicle fusion GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0061891F:calcium ion sensor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0070382C:exocytic vesicle GO:0098793C:presynapse |
Other
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SRR953582_primary_scf7180002161575_1-3263
Len: 3,262 bp
Hits: 20
E-val: 7.70E-38
Sim: 78.9%
|
XP_026085319.1autophagy-related protein 2 homolog B isoform X1 |
GO:0000045P:autophagosome assembly GO:0000422P:autophagy of mitochondrion GO:0006869P:lipid transport GO:0034727P:piecemeal microautophagy of the nucleus GO:0061709P:reticulophagy GO:0061723P:glycophagy GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0043495F:protein-membrane adaptor activity GO:0005789C:endoplasmic reticulum membrane GO:0005811C:lipid droplet GO:0034045C:phagophore assembly site membrane GO:0061908C:phagophore |
Other
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SRR953582_primary_scf7180002161797_1-2750
Len: 2,749 bp
Hits: 20
E-val: 4.70E-36
Sim: 91.58%
|
XP_018954241.1 dynamin-3-like |
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
Cell Signaling
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SRR953582_primary_scf7180002161800_1-2152
Len: 2,151 bp
Hits: 20
E-val: 3.10E-43
Sim: 53.03%
|
XP_018976812.1 protein FAM149B1-like isoform X1 |
GO:0060271P:cilium assembly GO:0061512P:protein localization to cilium |
Other
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SRR953582_primary_scf7180002161815_1845-2111
Len: 266 bp
Hits: 20
E-val: 2.00E-37
Sim: 99.69%
|
XP_026068963.1TAR DNA-binding protein 43-like |
GO:0006338P:chromatin remodeling GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0010468P:regulation of gene expression GO:0003677F:DNA binding GO:0003723F:RNA binding GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0005739C:mitochondrion GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002161839_1-2152
Len: 2,151 bp
Hits: 20
E-val: 4.20E-16
Sim: 99.43%
|
XP_026101542.1reelin-like isoform X1 |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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