Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002163679_1452-2389
Len: 937 bp
Hits: 20
E-val: 2.50E-13
Sim: 93.75%
|
XP_026070806.1CREB-regulated transcription coactivator 3-like isoform X1 |
GO:0001666P:response to hypoxia GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051289P:protein homotetramerization GO:0071320P:cellular response to cAMP GO:0071878P:negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway GO:0003713F:transcription coactivator activity GO:0008140F:cAMP response element binding protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Cell Signaling
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SRR953582_primary_scf7180002163700_1-2004
Len: 2,003 bp
Hits: 20
E-val: 3.20E-34
Sim: 79.94%
|
XP_016118587.1 GTP-binding protein 2-like |
GO:0006414P:translational elongation GO:0003746F:translation elongation factor activity GO:0003924F:GTPase activity GO:0005525F:GTP binding |
Other
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SRR953582_primary_scf7180002163732_1-543
Len: 542 bp
Hits: 20
E-val: 7.70E-60
Sim: 74.21%
|
XP_018958275.1 homeobox protein MSX-2-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0043049P:otic placode formation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002163765_1-2661
Len: 2,660 bp
Hits: 20
E-val: 1.10E-26
Sim: 84.26%
|
XP_018926379.1 LOW QUALITY PROTEIN: thrombospondin-3a-like |
GO:0007155P:cell adhesion GO:0060231P:mesenchymal to epithelial transition GO:0061053P:somite development GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0005576C:extracellular region |
Other
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SRR953582_primary_scf7180002163904_1-2441
Len: 2,440 bp
Hits: 20
E-val: 6.60E-50
Sim: 60.78%
|
XP_018976374.1 kinase D-interacting substrate of 220 kDa-like |
GO:0038180P:nerve growth factor signaling pathway GO:0016301F:kinase activity GO:0019887F:protein kinase regulator activity GO:0030165F:PDZ domain binding GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002163910_1-2636
Len: 2,635 bp
Hits: 20
E-val: 1.50E-39
Sim: 99.56%
|
ROK76664.1ER lumen protein-retaining receptor 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006621P:protein retention in ER lumen GO:0015031P:protein transport GO:0016192P:vesicle-mediated transport GO:0019369P:arachidonate metabolic process GO:0022008P:neurogenesis GO:0046340P:diacylglycerol catabolic process GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004806F:triacylglycerol lipase activity GO:0008270F:zinc ion binding GO:0043565F:sequence-specific DNA binding GO:0046923F:ER retention sequence binding GO:0000139C:Golgi membrane GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0030663C:COPI-coated vesicle membrane |
Transcription Regulation
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SRR953582_primary_scf7180002163962_1-2424
Len: 2,423 bp
Hits: 20
E-val: 5.40E-28
Sim: 90.96%
|
XP_018927889.1 lipoma-preferred partner homolog |
GO:0060030P:dorsal convergence GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0046872F:metal ion binding GO:0001725C:stress fiber GO:0005925C:focal adhesion |
Other
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SRR953582_primary_scf7180002163964_260-2096
Len: 1,836 bp
Hits: 20
E-val: 1.60E-32
Sim: 61.07%
|
XP_026145250.1flotillin-1-like |
GO:0048522P:positive regulation of cellular process GO:0051128P:regulation of cellular component organization GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002164009_1-2529
Len: 2,528 bp
Hits: 20
E-val: 2.70E-22
Sim: 97.6%
|
XP_010785838.1 E3 ubiquitin-protein ligase CBL-B-B-like, partial |
GO:0016567P:protein ubiquitination GO:0042059P:negative regulation of epidermal growth factor receptor signaling pathway GO:0001784F:phosphotyrosine residue binding GO:0005509F:calcium ion binding GO:0008270F:zinc ion binding GO:0017124F:SH3 domain binding GO:0030971F:receptor tyrosine kinase binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0045121C:membrane raft |
Signal Transduction
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SRR953582_primary_scf7180002164088_210-1403
Len: 1,193 bp
Hits: 20
E-val: 5.20E-234
Sim: 90.8%
|
XP_018939882.1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9-like |
GO:0006493P:protein O-linked glycosylation GO:0030311P:poly-N-acetyllactosamine biosynthetic process GO:0008194F:UDP-glycosyltransferase activity GO:0016758F:hexosyltransferase activity GO:0000139C:Golgi membrane |
Other
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SRR953582_primary_scf7180002164174_1-2477
Len: 2,476 bp
Hits: 20
E-val: 3.00E-34
Sim: 53.25%
|
XP_018959997.1 LOW QUALITY PROTEIN: general transcription factor II-I repeat domain-containing protein 1-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002164192_72-539
Len: 467 bp
Hits: 20
E-val: 3.20E-78
Sim: 75.4%
|
XP_016324103.1 zinc finger BED domain-containing protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002164208_188-2256
Len: 2,068 bp
Hits: 20
E-val: 9.00E-24
Sim: 92.87%
|
ROI81838.1E3 ubiquitin-protein ligase BRE1B |
GO:0006325P:chromatin organization GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0016020C:membrane GO:0033503C:HULC complex |
DNA Metabolism
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SRR953582_primary_scf7180002164223_1-1258
Len: 1,257 bp
Hits: 20
E-val: 2.00E-42
Sim: 50.35%
|
XP_018951915.1 LOW QUALITY PROTEIN: acetyl-CoA carboxylase-like, partial |
GO:0006633P:fatty acid biosynthetic process GO:2001295P:malonyl-CoA biosynthetic process GO:0003989F:acetyl-CoA carboxylase activity GO:0005524F:ATP binding GO:0016874F:ligase activity GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005739C:mitochondrion |
DNA Metabolism
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SRR953582_primary_scf7180002164300_1400-2058
Len: 658 bp
Hits: 20
E-val: 1.30E-16
Sim: 97.38%
|
XP_026094041.1protein disulfide-isomerase TMX3-like |
Other
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SRR953582_primary_scf7180002164328_1-1964
Len: 1,963 bp
Hits: 20
E-val: 8.00E-22
Sim: 58.12%
|
XP_018977419.1 lethal(2) giant larvae protein homolog 1 isoform X1 |
GO:0009987P:cellular process GO:0110165C:cellular anatomical structure |
Other
|
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SRR953582_primary_scf7180002164385_970-2046
Len: 1,076 bp
Hits: 20
E-val: 1.90E-206
Sim: 90.48%
|
XP_018974763.1 toll-like receptor 13 |
GO:0002224P:toll-like receptor signaling pathway GO:0006954P:inflammatory response GO:0009966P:regulation of signal transduction GO:0055085P:transmembrane transport GO:0005525F:GTP binding GO:0015293F:symporter activity GO:0038023F:signaling receptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002164410_1-2994
Len: 2,993 bp
Hits: 20
E-val: 1.30E-23
Sim: 84.42%
|
XP_009290773.1protein dopey-1 isoform X1 |
GO:0006895P:Golgi to endosome transport GO:0015031P:protein transport GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180002164426_1-2024
Len: 2,023 bp
Hits: 20
E-val: 2.70E-09
Sim: 69.04%
|
XP_016327314.1 dedicator of cytokinesis protein 3-like |
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002164476_894-2106
Len: 1,212 bp
Hits: 20
E-val: 3.40E-47
Sim: 98.63%
|
RXN17338.1sonic hedgehog |
GO:0001756P:somitogenesis GO:0001839P:neural plate morphogenesis GO:0001947P:heart looping GO:0007267P:cell-cell signaling GO:0007411P:axon guidance GO:0008015P:blood circulation GO:0008285P:negative regulation of cell population proliferation GO:0009953P:dorsal/ventral pattern formation GO:0010002P:cardioblast differentiation GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0021508P:floor plate formation GO:0021520P:spinal cord motor neuron cell fate specification GO:0021984P:adenohypophysis development GO:0021986P:habenula development GO:0030510P:regulation of BMP signaling pathway GO:0030902P:hindbrain development GO:0030917P:midbrain-hindbrain boundary development GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0031018P:endocrine pancreas development GO:0031076P:embryonic camera-type eye development GO:0032835P:glomerulus development GO:0033339P:pectoral fin development GO:0035143P:caudal fin morphogenesis GO:0042462P:eye photoreceptor cell development GO:0042476P:odontogenesis GO:0042694P:muscle cell fate specification GO:0045494P:photoreceptor cell maintenance GO:0045880P:positive regulation of smoothened signaling pathway GO:0048557P:embryonic digestive tract morphogenesis GO:0048618P:post-embryonic foregut morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0048709P:oligodendrocyte differentiation GO:0048741P:skeletal muscle fiber development GO:0048793P:pronephros development GO:0048795P:swim bladder morphogenesis GO:0048839P:inner ear development GO:0060956P:endocardial cell differentiation GO:0061035P:regulation of cartilage development GO:0070444P:oligodendrocyte progenitor proliferation GO:0097264P:self proteolysis GO:1905178P:regulation of cardiac muscle tissue regeneration GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0140853F:cholesterol-protein transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002164483_1210-1909
Len: 699 bp
Hits: 20
E-val: 4.10E-29
Sim: 60.49%
|
XP_018947411.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase |
GO:0006633P:fatty acid biosynthetic process GO:0016829F:lyase activity GO:0110165C:cellular anatomical structure |
Other
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SRR953582_primary_scf7180002164525_814-2792
Len: 1,978 bp
Hits: 20
E-val: 1.70E-16
Sim: 96.59%
|
RXN03089.1dnaJ -like protein |
GO:0006355P:regulation of DNA-templated transcription GO:0042407P:cristae formation GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002164574_1-1987
Len: 1,986 bp
Hits: 20
E-val: 1.40E-37
Sim: 54.89%
|
BAE46430.1reverse transcriptase |
GO:0004104F:cholinesterase activity GO:0016787F:hydrolase activity |
Other
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SRR953582_primary_scf7180002164581_1-1421
Len: 1,420 bp
Hits: 20
E-val: 4.40E-30
Sim: 97.5%
|
XP_016092458.1 transcriptional coactivator YAP1 |
GO:0001570P:vasculogenesis GO:0001889P:liver development GO:0003173P:ventriculo bulbo valve development GO:0003406P:retinal pigment epithelium development GO:0007155P:cell adhesion GO:0007420P:brain development GO:0007492P:endoderm development GO:0009950P:dorsal/ventral axis specification GO:0010629P:negative regulation of gene expression GO:0030509P:BMP signaling pathway GO:0031016P:pancreas development GO:0031101P:fin regeneration GO:0035162P:embryonic hemopoiesis GO:0035329P:hippo signaling GO:0039022P:pronephric duct development GO:0042593P:glucose homeostasis GO:0043066P:negative regulation of apoptotic process GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046620P:regulation of organ growth GO:0048566P:embryonic digestive tract development GO:0048916P:posterior lateral line development GO:0051216P:cartilage development GO:0060271P:cilium assembly GO:0060914P:heart formation GO:0061371P:determination of heart left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:1905590P:fibronectin fibril organization GO:0003713F:transcription coactivator activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005923C:bicellular tight junction |
Cell Signaling
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SRR953582_primary_scf7180002164610_1-1915
Len: 1,914 bp
Hits: 20
E-val: 2.10E-43
Sim: 64.91%
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XP_018954083.1 LOW QUALITY PROTEIN: type I inositol 3,4-bisphosphate 4-phosphatase-like |
GO:0044238P:primary metabolic process GO:0016787F:hydrolase activity |
Metabolism
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