Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002190848_1061-1896
Len: 835 bp
Hits: 20
E-val: 1.10E-36
Sim: 98.3%
|
XP_016149279.1 hepatic leukemia factor-like |
GO:0035914P:skeletal muscle cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005515F:protein binding GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0090575C:RNA polymerase II transcription regulator complex |
Transcription Regulation
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SRR953582_primary_scf7180002190890_892-1621
Len: 729 bp
Hits: 20
E-val: 7.50E-26
Sim: 80.69%
|
XP_016120713.1 metastasis-associated protein MTA1-like, partial |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006302P:double-strand break repair GO:0010212P:response to ionizing radiation GO:0045893P:positive regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0042826F:histone deacetylase binding GO:0043565F:sequence-specific DNA binding GO:0016581C:NuRD complex |
Transcription Regulation
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SRR953582_primary_scf7180002190892_622-1635
Len: 1,013 bp
Hits: 20
E-val: 1.50E-56
Sim: 91.56%
|
XP_018973150.1 LOW QUALITY PROTEIN: TLC domain-containing protein 2, partial |
GO:0007009P:plasma membrane organization GO:0055091P:phospholipid homeostasis GO:0071709P:membrane assembly GO:0097035P:regulation of membrane lipid distribution GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002191017_947-1249
Len: 302 bp
Hits: 20
E-val: 1.30E-27
Sim: 96.18%
|
XP_026064351.1potassium voltage-gated channel subfamily H member 6-like |
GO:0060307P:regulation of ventricular cardiac muscle cell membrane repolarization GO:0071805P:potassium ion transmembrane transport GO:0086013P:membrane repolarization during cardiac muscle cell action potential GO:0086091P:regulation of heart rate by cardiac conduction GO:0005242F:inward rectifier potassium channel activity GO:0005634C:nucleus GO:0005882C:intermediate filament GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
Ion Transport
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SRR953582_primary_scf7180002191034_1-837
Len: 836 bp
Hits: 20
E-val: 6.60E-42
Sim: 69.68%
|
XP_016130227.1 zinc transporter ZIP8-like |
GO:0006810P:transport GO:0008324F:monoatomic cation transmembrane transporter activity |
Membrane Transport
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SRR953582_primary_scf7180002191041_1-1612
Len: 1,611 bp
Hits: 20
E-val: 4.80E-33
Sim: 94.43%
|
XP_016112249.1 LOW QUALITY PROTEIN: CUB and sushi domain-containing protein 3-like, partial |
Protein Degradation
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SRR953582_primary_scf7180002191048_1-1394
Len: 1,393 bp
Hits: 20
E-val: 7.40E-38
Sim: 89.85%
|
XP_018962045.1 adhesion G protein-coupled receptor L3-like |
GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0030246F:carbohydrate binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002191049_773-1141
Len: 368 bp
Hits: 20
E-val: 8.30E-66
Sim: 97.21%
|
XP_018928384.1 transcription factor Sp1-like |
Cell Signaling
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SRR953582_primary_scf7180002191056_1-1040
Len: 1,039 bp
Hits: 20
E-val: 1.20E-48
Sim: 63.3%
|
XP_018946252.1 ras association domain-containing protein 2-like isoform X1 |
GO:1902531P:regulation of intracellular signal transduction GO:0005622C:intracellular anatomical structure |
Other
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SRR953582_primary_scf7180002191241_1-1599
Len: 1,598 bp
Hits: 20
E-val: 3.60E-12
Sim: 98.4%
|
XP_026139119.1mannosyl-oligosaccharide 1,2-alpha-mannosidase IA-like |
GO:0005975P:carbohydrate metabolic process GO:0004571F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity GO:0005509F:calcium ion binding GO:0000139C:Golgi membrane GO:0005783C:endoplasmic reticulum GO:0070062C:extracellular exosome |
Metabolism
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SRR953582_primary_scf7180002191339_1-1436
Len: 1,435 bp
Hits: 20
E-val: 2.90E-29
Sim: 98.75%
|
RXN06712.1E3 ubiquitin- ligase MYLIP |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0007369P:gastrulation GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005829C:cytosol GO:0005856C:cytoskeleton |
DNA Metabolism
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SRR953582_primary_scf7180002191350_379-1898
Len: 1,519 bp
Hits: 20
E-val: 6.20E-30
Sim: 91.88%
|
XP_018971219.1 WW domain-containing adapter protein with coiled-coil-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0010506P:regulation of autophagy GO:0031571P:mitotic G1 DNA damage checkpoint signaling GO:0045893P:positive regulation of DNA-templated transcription GO:1904263P:positive regulation of TORC1 signaling GO:0000993F:RNA polymerase II complex binding GO:0003682F:chromatin binding GO:0005634C:nucleus GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002191432_1-1647
Len: 1,646 bp
Hits: 20
E-val: 4.20E-93
Sim: 93.65%
|
XP_018921264.1 septin-9-like isoform X1 |
DNA Metabolism
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SRR953582_primary_scf7180002191526_1-811
Len: 810 bp
Hits: 20
E-val: 1.70E-31
Sim: 98.65%
|
RXN25572.1lipopolysaccharide-responsive and beige-like anchor isoform X1 |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002191569_554-1142
Len: 588 bp
Hits: 20
E-val: 1.50E-48
Sim: 98.4%
|
RXN08009.1gamma-aminobutyric acid receptor subunit gamma-3 |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0051932P:synaptic transmission, GABAergic GO:1902476P:chloride transmembrane transport GO:1904862P:inhibitory synapse assembly GO:0004890F:GABA-A receptor activity GO:0008503F:benzodiazepine receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:0032590C:dendrite membrane GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002191659_1061-1553
Len: 492 bp
Hits: 20
E-val: 9.20E-52
Sim: 89.32%
|
XP_018974564.1 C-type natriuretic peptide-like |
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0097746P:blood vessel diameter maintenance GO:0005179F:hormone activity GO:0051427F:hormone receptor binding GO:0005576C:extracellular region |
Cell Signaling
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SRR953582_primary_scf7180002191713_1-1241
Len: 1,240 bp
Hits: 20
E-val: 4.60E-23
Sim: 84.13%
|
AHB86959.1calpain 3 |
GO:0006508P:proteolysis GO:0043066P:negative regulation of apoptotic process GO:0004198F:calcium-dependent cysteine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
Protein Degradation
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SRR953582_primary_scf7180002191802_1-1596
Len: 1,595 bp
Hits: 20
E-val: 6.70E-27
Sim: 95.21%
|
XP_016392682.1 pleckstrin homology domain-containing family H member 2-like |
GO:0030835P:negative regulation of actin filament depolymerization GO:0003779F:actin binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR953582_primary_scf7180002191969_348-810
Len: 462 bp
Hits: 17
E-val: 5.30E-09
Sim: 94.3%
|
XP_018927834.1 rab-like protein 2A |
GO:0003924F:GTPase activity GO:0005525F:GTP binding |
Other
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SRR953582_primary_scf7180002192027_230-1153
Len: 923 bp
Hits: 20
E-val: 1.10E-34
Sim: 92.12%
|
XP_016100154.1 rho GTPase-activating protein 18-like |
GO:0030833P:regulation of actin filament polymerization GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002192044_1-857
Len: 856 bp
Hits: 20
E-val: 4.10E-15
Sim: 94.6%
|
XP_018919570.1 BTB/POZ domain-containing protein KCTD9-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0035556P:intracellular signal transduction GO:0051260P:protein homooligomerization GO:0016020C:membrane |
Membrane Transport
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SRR953582_primary_scf7180002192086_1-1443
Len: 1,442 bp
Hits: 20
E-val: 1.30E-24
Sim: 92.32%
|
XP_016323998.1 guanine nucleotide exchange factor DBS-like |
GO:0015698P:inorganic anion transport GO:0015701P:bicarbonate transport GO:0035556P:intracellular signal transduction GO:0035725P:sodium ion transmembrane transport GO:0051453P:regulation of intracellular pH GO:0098656P:monoatomic anion transmembrane transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005452F:solute:inorganic anion antiporter activity GO:0008509F:monoatomic anion transmembrane transporter activity GO:0008510F:sodium:bicarbonate symporter activity GO:0005737C:cytoplasm GO:0016323C:basolateral plasma membrane |
Ion Transport
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SRR953582_primary_scf7180002192120_1-1454
Len: 1,453 bp
Hits: 20
E-val: 3.10E-23
Sim: 98.37%
|
XP_018963469.1 metal transporter CNNM4-like isoform X1 |
GO:0010960P:magnesium ion homeostasis GO:0035725P:sodium ion transmembrane transport GO:0060041P:retina development in camera-type eye GO:1903830P:magnesium ion transmembrane transport GO:0015081F:sodium ion transmembrane transporter activity GO:0015095F:magnesium ion transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002192224_881-1279
Len: 398 bp
Hits: 20
E-val: 9.10E-42
Sim: 79.4%
|
XP_005994758.1 kinesin-1 heavy chain |
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005874C:microtubule |
Other
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SRR953582_primary_scf7180002192261_1-1354
Len: 1,353 bp
Hits: 20
E-val: 6.50E-23
Sim: 97.91%
|
RXN05018.1mediator of RNA polymerase II transcription subunit 6 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0016592C:mediator complex GO:0070847C:core mediator complex |
Transcription Regulation
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