Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002197329_115-861
Len: 746 bp
Hits: 20
E-val: 3.30E-138
Sim: 89.79%
|
XP_018946713.1 neurotrophin-3-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007422P:peripheral nervous system development GO:0021675P:nerve development GO:0038180P:nerve growth factor signaling pathway GO:0043524P:negative regulation of neuron apoptotic process GO:0048812P:neuron projection morphogenesis GO:0050804P:modulation of chemical synaptic transmission GO:0005163F:nerve growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0008021C:synaptic vesicle GO:0016020C:membrane GO:0030424C:axon GO:0030425C:dendrite |
Signal Transduction
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SRR953582_primary_scf7180002197364_26-1249
Len: 1,223 bp
Hits: 20
E-val: 1.10E-24
Sim: 93.34%
|
XP_018921753.1 protein spinster homolog 1-like isoform X1 |
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0090398P:cellular senescence GO:0097352P:autophagosome maturation GO:0022857F:transmembrane transporter activity GO:0005765C:lysosomal membrane GO:0012505C:endomembrane system |
Membrane Transport
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SRR953582_primary_scf7180002197365_285-1139
Len: 854 bp
Hits: 20
E-val: 2.50E-57
Sim: 50.01%
|
XP_018959574.1 low-density lipoprotein receptor-related protein 1B-like |
GO:0006897P:endocytosis GO:0006898P:receptor-mediated endocytosis GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002197388_1-1404
Len: 1,403 bp
Hits: 20
E-val: 1.90E-46
Sim: 57.2%
|
XP_018975275.1 LOW QUALITY PROTEIN: sodium-dependent neutral amino acid transporter B(0)AT2-like |
GO:0015695P:organic cation transport GO:0015804P:neutral amino acid transport GO:0046942P:carboxylic acid transport GO:0071705P:nitrogen compound transport GO:0110165C:cellular anatomical structure |
Ion Transport
|
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SRR953582_primary_scf7180002197486_1-1685
Len: 1,684 bp
Hits: 20
E-val: 4.00E-30
Sim: 94.93%
|
XP_016355022.1 utrophin |
GO:0099536P:synaptic signaling GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0045211C:postsynaptic membrane GO:0120025C:plasma membrane bounded cell projection |
Cell Signaling
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SRR953582_primary_scf7180002197681_1-1960
Len: 1,959 bp
Hits: 20
E-val: 6.70E-21
Sim: 98.6%
|
RXN15353.1cadherin-2 |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR953582_primary_scf7180002197696_726-1379
Len: 653 bp
Hits: 20
E-val: 7.00E-23
Sim: 96.54%
|
XP_016382287.1 stathmin-4-like |
GO:0007019P:microtubule depolymerization GO:0031110P:regulation of microtubule polymerization or depolymerization GO:0031175P:neuron projection development GO:0045664P:regulation of neuron differentiation GO:1902749P:regulation of cell cycle G2/M phase transition GO:0015631F:tubulin binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0043005C:neuron projection |
Other
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SRR953582_primary_scf7180002197758_1-1182
Len: 1,181 bp
Hits: 20
E-val: 4.50E-113
Sim: 96.92%
|
XP_016098304.1 paired box protein Pax-1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0033339P:pectoral fin development GO:0048706P:embryonic skeletal system development GO:0060037P:pharyngeal system development GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR953582_primary_scf7180002197886_1-1118
Len: 1,117 bp
Hits: 20
E-val: 1.90E-206
Sim: 90.33%
|
XP_018950252.1 hepatocyte nuclear factor 3-gamma-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0009888P:tissue development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002197917_267-1460
Len: 1,193 bp
Hits: 20
E-val: 7.00E-37
Sim: 89.98%
|
XP_018918486.1 LOW QUALITY PROTEIN: agrin |
GO:0007409P:axonogenesis GO:0007417P:central nervous system development GO:0007422P:peripheral nervous system development GO:0009952P:anterior/posterior pattern specification GO:0010842P:retina layer formation GO:0043113P:receptor clustering GO:0005509F:calcium ion binding GO:0043236F:laminin binding GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002198210_1-447
Len: 446 bp
Hits: 20
E-val: 5.60E-16
Sim: 98.28%
|
XP_018935868.1 sulfhydryl oxidase 2-like |
GO:0006457P:protein folding GO:0003756F:protein disulfide isomerase activity GO:0016971F:flavin-dependent sulfhydryl oxidase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space |
Stress Response
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SRR953582_primary_scf7180002198226_1-936
Len: 935 bp
Hits: 20
E-val: 3.20E-45
Sim: 99.41%
|
XP_026060331.1probable RNA-binding protein 46 isoform X1 |
GO:0007283P:spermatogenesis GO:0048477P:oogenesis GO:0051321P:meiotic cell cycle GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002198279_1253-1495
Len: 242 bp
Hits: 20
E-val: 1.10E-37
Sim: 100%
|
XP_026114344.1rhomboid-related protein 1 isoform X3 |
GO:0004252F:serine-type endopeptidase activity GO:0016020C:membrane |
Protein Degradation
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SRR953582_primary_scf7180002198381_1-1331
Len: 1,330 bp
Hits: 20
E-val: 4.50E-53
Sim: 71.14%
|
XP_016119020.1 death-associated protein kinase 2-like |
GO:0035556P:intracellular signal transduction GO:0043065P:positive regulation of apoptotic process GO:0004674F:protein serine/threonine kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002198409_389-1089
Len: 700 bp
Hits: 20
E-val: 3.20E-122
Sim: 89.8%
|
XP_018936510.1 prostaglandin F2-alpha receptor |
GO:0006954P:inflammatory response GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0004958F:prostaglandin F receptor activity GO:0004960F:thromboxane receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002198483_1-1584
Len: 1,583 bp
Hits: 20
E-val: 6.90E-16
Sim: 96.07%
|
RXN39111.1arf-GAP with ANK repeat and PH domain-containing 1-like isoform X2 |
GO:0003925F:G protein activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding |
Other
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SRR953582_primary_scf7180002198514_1-998
Len: 997 bp
Hits: 20
E-val: 8.70E-17
Sim: 97.52%
|
XP_026055920.1MICOS complex subunit mic25a isoform X1 |
DNA Metabolism
|
|
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SRR953582_primary_scf7180002198526_1-1738
Len: 1,737 bp
Hits: 20
E-val: 1.00E-20
Sim: 91.43%
|
XP_016369148.1 RNA-binding protein 10-like |
GO:0000398P:mRNA splicing, via spliceosome GO:0003723F:RNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Other
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SRR953582_primary_scf7180002198551_1-1694
Len: 1,693 bp
Hits: 20
E-val: 8.10E-23
Sim: 100%
|
XP_026130981.1inositol 1,4,5-trisphosphate receptor type 1-like isoform X1 |
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
Cell Signaling
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SRR953582_primary_scf7180002198679_1-896
Len: 895 bp
Hits: 20
E-val: 6.40E-160
Sim: 98.53%
|
XP_018938350.1 gap junction delta-2 protein-like |
GO:0007267P:cell-cell signaling GO:0042254P:ribosome biogenesis GO:0055085P:transmembrane transport GO:0005243F:gap junction channel activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0005922C:connexin complex |
Cell Signaling
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SRR953582_primary_scf7180002198706_613-1457
Len: 844 bp
Hits: 20
E-val: 7.60E-30
Sim: 60.64%
|
XP_018980820.1 tax1-binding protein 1 homolog A-like |
GO:0006915P:apoptotic process GO:0008270F:zinc ion binding |
Other
|
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SRR953582_primary_scf7180002198996_1-476
Len: 475 bp
Hits: 20
E-val: 5.30E-12
Sim: 89.7%
|
XP_018969573.1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 |
GO:0006195P:purine nucleotide catabolic process GO:0009159P:deoxyribonucleoside monophosphate catabolic process GO:0030307P:positive regulation of cell growth GO:0030855P:epithelial cell differentiation GO:0043174P:nucleoside salvage GO:0042803F:protein homodimerization activity GO:0070694F:5-hydroxymethyl-dUMP N-hydrolase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180002199044_1-1612
Len: 1,611 bp
Hits: 20
E-val: 3.90E-59
Sim: 86.27%
|
XP_018981877.1 homeobox protein aristaless-like 4 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002199051_1-1063
Len: 1,062 bp
Hits: 20
E-val: 2.30E-23
Sim: 98.45%
|
XP_018956944.1 protein sidekick-1-like, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0007420P:brain development GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0045202C:synapse |
Other
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SRR953582_primary_scf7180002199148_1-1236
Len: 1,235 bp
Hits: 20
E-val: 9.10E-40
Sim: 50.82%
|
XP_016109920.1 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like |
GO:0007165P:signal transduction GO:0008360P:regulation of cell shape GO:0005096F:GTPase activator activity GO:0005547F:phosphatidylinositol-3,4,5-trisphosphate binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
Other
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