Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002199206_1-1675
Len: 1,674 bp
Hits: 20
E-val: 2.30E-25
Sim: 88.2%
|
XP_016141470.1 sarcosine dehydrogenase, mitochondrial isoform X1 |
GO:1901053P:sarcosine catabolic process GO:0008480F:sarcosine dehydrogenase activity GO:0005759C:mitochondrial matrix |
Other
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SRR953582_primary_scf7180002199381_1-821
Len: 820 bp
Hits: 20
E-val: 3.80E-18
Sim: 93.83%
|
XP_016129321.1 E3 ubiquitin-protein ligase UBR2-like |
GO:0016567P:protein ubiquitination GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
DNA Metabolism
|
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SRR953582_primary_scf7180002199470_1-1748
Len: 1,747 bp
Hits: 20
E-val: 5.10E-20
Sim: 97.17%
|
KPP65443.1gamma-aminobutyric acid receptor subunit beta-3-like, partial |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0060078P:regulation of postsynaptic membrane potential GO:0060119P:inner ear receptor cell development GO:0060384P:innervation GO:0090102P:cochlea development GO:1902476P:chloride transmembrane transport GO:1904862P:inhibitory synapse assembly GO:0004890F:GABA-A receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0034707C:chloride channel complex GO:0043197C:dendritic spine GO:0098982C:GABA-ergic synapse GO:0099634C:postsynaptic specialization membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002199503_1-1345
Len: 1,344 bp
Hits: 20
E-val: 8.10E-26
Sim: 90.95%
|
RXN19105.1kinase D-interacting substrate of 220 kDa isoform X1 |
GO:0038180P:nerve growth factor signaling pathway GO:0016301F:kinase activity GO:0019887F:protein kinase regulator activity GO:0030165F:PDZ domain binding GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002199670_1-785
Len: 784 bp
Hits: 20
E-val: 1.30E-47
Sim: 94.47%
|
XP_016405866.1 E3 ubiquitin-protein ligase HACE1-like |
GO:0001947P:heart looping GO:0003190P:atrioventricular valve formation GO:0003208P:cardiac ventricle morphogenesis GO:0006511P:ubiquitin-dependent protein catabolic process GO:0007030P:Golgi organization GO:0030334P:regulation of cell migration GO:0061025P:membrane fusion GO:0070936P:protein K48-linked ubiquitination GO:1903427P:negative regulation of reactive oxygen species biosynthetic process GO:0016874F:ligase activity GO:0031267F:small GTPase binding GO:0061630F:ubiquitin protein ligase activity GO:0000139C:Golgi membrane GO:0005634C:nucleus GO:0005783C:endoplasmic reticulum GO:0032580C:Golgi cisterna membrane |
DNA Metabolism
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SRR953582_primary_scf7180002199720_1-1108
Len: 1,107 bp
Hits: 20
E-val: 3.40E-22
Sim: 58.16%
|
RXN06070.1metastasis-associated MTA2-like protein |
GO:0005488F:binding GO:0043229C:intracellular organelle |
Other
|
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SRR953582_primary_scf7180002199847_778-1570
Len: 792 bp
Hits: 20
E-val: 1.50E-27
Sim: 100%
|
XP_026100750.1glutamate receptor ionotropic, kainate 1-like |
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002199922_1-1342
Len: 1,341 bp
Hits: 20
E-val: 1.30E-20
Sim: 97.56%
|
ROL03952.1Glutamate receptor ionotropic, delta-1 |
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR953582_primary_scf7180002199927_762-1339
Len: 577 bp
Hits: 20
E-val: 3.10E-22
Sim: 98.93%
|
XP_016384119.1 cAMP-regulated phosphoprotein 19 isoform X1 |
GO:0051301P:cell division GO:0004864F:protein phosphatase inhibitor activity GO:0005737C:cytoplasm GO:0012505C:endomembrane system |
Other
|
|
SRR953582_primary_scf7180002199969_1-454
Len: 453 bp
Hits: 20
E-val: 3.40E-08
Sim: 100%
|
XP_026135344.1THO complex subunit 2-like isoform X3 |
GO:0006397P:mRNA processing GO:0006406P:mRNA export from nucleus GO:0003729F:mRNA binding GO:0000445C:THO complex part of transcription export complex |
Transcription Regulation
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SRR953582_primary_scf7180002200108_1-1298
Len: 1,297 bp
Hits: 20
E-val: 1.50E-32
Sim: 100%
|
XP_018934685.1 lipopolysaccharide-responsive and beige-like anchor protein |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
|
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SRR953582_primary_scf7180002200125_1-1316
Len: 1,315 bp
Hits: 20
E-val: 1.50E-24
Sim: 93.4%
|
XP_018944706.1 calsyntenin-2-like, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0050806P:positive regulation of synaptic transmission GO:0051965P:positive regulation of synapse assembly GO:0005509F:calcium ion binding GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane GO:0009986C:cell surface GO:0030425C:dendrite GO:0045211C:postsynaptic membrane |
Other
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SRR953582_primary_scf7180002200157_709-1671
Len: 962 bp
Hits: 20
E-val: 1.40E-11
Sim: 93.5%
|
XP_026071787.1HMG box-containing protein 4-like isoform X1 |
GO:0003677F:DNA binding GO:0005634C:nucleus |
DNA Metabolism
|
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SRR953582_primary_scf7180002200265_1-412
Len: 411 bp
Hits: 20
E-val: 3.90E-11
Sim: 100%
|
XP_026071997.1reticulocalbin-1-like |
GO:0005509F:calcium ion binding GO:0005783C:endoplasmic reticulum |
Other
|
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SRR953582_primary_scf7180002200390_214-1814
Len: 1,600 bp
Hits: 20
E-val: 1.30E-51
Sim: 99.95%
|
RXN08572.1semaphorin-5A |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0048675P:axon extension GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR953582_primary_scf7180002200436_1-1361
Len: 1,360 bp
Hits: 20
E-val: 1.30E-34
Sim: 97.23%
|
XP_018939147.1 thrombospondin type-1 domain-containing protein 7A |
GO:0002040P:sprouting angiogenesis GO:0003094P:glomerular filtration GO:0008593P:regulation of Notch signaling pathway GO:0030036P:actin cytoskeleton organization GO:0043534P:blood vessel endothelial cell migration GO:0048675P:axon extension GO:0072015P:podocyte development GO:0005886C:plasma membrane GO:0042995C:cell projection |
Cell Signaling
|
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SRR953582_primary_scf7180002200483_1-1258
Len: 1,257 bp
Hits: 20
E-val: 4.30E-170
Sim: 90.19%
|
XP_016300365.1 alpha-internexin-like |
GO:0006355P:regulation of DNA-templated transcription GO:0045109P:intermediate filament organization GO:0048812P:neuron projection morphogenesis GO:0099185P:postsynaptic intermediate filament cytoskeleton organization GO:0003700F:DNA-binding transcription factor activity GO:0043565F:sequence-specific DNA binding GO:0099184F:structural constituent of postsynaptic intermediate filament cytoskeleton GO:0005737C:cytoplasm GO:0005882C:intermediate filament GO:0099160C:postsynaptic intermediate filament cytoskeleton |
Transcription Regulation
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|
SRR953582_primary_scf7180002200807_1-1171
Len: 1,170 bp
Hits: 20
E-val: 1.10E-18
Sim: 100%
|
XP_026107154.1tyrosine-protein phosphatase non-receptor type 9-like |
GO:0007165P:signal transduction GO:0043249P:erythrocyte maturation GO:0060215P:primitive hemopoiesis GO:0004725F:protein tyrosine phosphatase activity |
Other
|
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SRR953582_primary_scf7180002200846_85-1433
Len: 1,348 bp
Hits: 20
E-val: 5.30E-25
Sim: 64.18%
|
XP_016387169.1 protein sidekick-1-like |
GO:0007411P:axon guidance GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Other
|
|
SRR953582_primary_scf7180002200928_496-1475
Len: 979 bp
Hits: 20
E-val: 2.20E-33
Sim: 98.06%
|
RXN35166.1gamma-aminobutyric acid receptor subunit beta-2 isoform X1 |
GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0051932P:synaptic transmission, GABAergic GO:1902476P:chloride transmembrane transport GO:1904862P:inhibitory synapse assembly GO:0004890F:GABA-A receptor activity GO:0008503F:benzodiazepine receptor activity GO:0022851F:GABA-gated chloride ion channel activity GO:0032590C:dendrite membrane GO:0034707C:chloride channel complex GO:0045211C:postsynaptic membrane GO:1902711C:GABA-A receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002200945_1-2435
Len: 2,434 bp
Hits: 20
E-val: 7.10E-20
Sim: 92.29%
|
XP_018946426.1 cyclin-Y-like |
GO:0001878P:response to yeast GO:0019901F:protein kinase binding |
Signal Transduction
|
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SRR953582_primary_scf7180002200977_1-1950
Len: 1,949 bp
Hits: 20
E-val: 1.90E-20
Sim: 98.98%
|
XP_026115253.1allograft inflammatory factor 1-like |
GO:0051017P:actin filament bundle assembly GO:0097178P:ruffle assembly GO:0005509F:calcium ion binding GO:0051015F:actin filament binding GO:0005884C:actin filament GO:0032587C:ruffle membrane |
Other
|
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SRR953582_primary_scf7180002201022_1-1036
Len: 1,035 bp
Hits: 20
E-val: 2.40E-70
Sim: 69.65%
|
XP_018949802.1 tripartite motif-containing protein 2-like |
GO:0000209P:protein polyubiquitination GO:0030099P:myeloid cell differentiation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0060215P:primitive hemopoiesis GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
|
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SRR953582_primary_scf7180002201037_616-1027
Len: 411 bp
Hits: 20
E-val: 3.30E-47
Sim: 97.57%
|
XP_016359671.1 E3 ubiquitin-protein ligase TRIM62-like isoform X1 |
DNA Metabolism
|
|
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SRR953582_primary_scf7180002201119_1-1396
Len: 1,395 bp
Hits: 20
E-val: 2.30E-47
Sim: 67.38%
|
XP_016387615.1 protein Jumonji-like isoform X1 |
GO:0006325P:chromatin organization GO:0043229C:intracellular organelle |
DNA Metabolism
|