Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002201314_1-1325
Len: 1,324 bp
Hits: 20
E-val: 9.80E-24
Sim: 97.38%
|
XP_016086106.1 homeobox protein Meis2-like |
GO:0001947P:heart looping GO:0003209P:cardiac atrium morphogenesis GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002201443_1-1184
Len: 1,183 bp
Hits: 20
E-val: 1.20E-44
Sim: 99.23%
|
XP_018962119.1 LOW QUALITY PROTEIN: ubiquitin-protein ligase E3C-like |
GO:0000209P:protein polyubiquitination GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR953582_primary_scf7180002201472_1-1039
Len: 1,038 bp
Hits: 20
E-val: 3.40E-48
Sim: 84.39%
|
XP_016090126.1 transcription factor E2-alpha-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0032872P:regulation of stress-activated MAPK cascade GO:0090170P:regulation of Golgi inheritance GO:2000641P:regulation of early endosome to late endosome transport GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0046983F:protein dimerization activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005739C:mitochondrion GO:0005769C:early endosome GO:0005770C:late endosome GO:0005925C:focal adhesion |
Signal Transduction
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SRR953582_primary_scf7180002201577_1-1326
Len: 1,325 bp
Hits: 20
E-val: 4.00E-25
Sim: 98.33%
|
XP_026073735.1citramalyl-CoA lyase, mitochondrial-like isoform X2 |
GO:0106064P:regulation of cobalamin metabolic process GO:0046872F:metal ion binding GO:0047777F:(S)-citramalyl-CoA lyase activity |
Metabolism
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SRR953582_primary_scf7180002201685_1-1158
Len: 1,157 bp
Hits: 20
E-val: 7.00E-34
Sim: 67.85%
|
XP_018969936.1 LOW QUALITY PROTEIN: probable methyltransferase TARBP1 |
GO:0030488P:tRNA methylation GO:0003723F:RNA binding GO:0016423F:tRNA (guanine) methyltransferase activity |
Other
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SRR953582_primary_scf7180002201807_1-786
Len: 785 bp
Hits: 20
E-val: 8.60E-52
Sim: 97.31%
|
XP_018977266.1 methyltransferase-like protein 13 |
GO:0032259P:methylation GO:0008757F:S-adenosylmethionine-dependent methyltransferase activity |
Other
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SRR953582_primary_scf7180002201917_116-1735
Len: 1,619 bp
Hits: 20
E-val: 7.50E-34
Sim: 67.5%
|
XP_026142348.1jouberin isoform X3 |
GO:0007368P:determination of left/right symmetry GO:0031290P:retinal ganglion cell axon guidance GO:0035845P:photoreceptor cell outer segment organization GO:0044458P:motile cilium assembly GO:0071599P:otic vesicle development |
Cell Signaling
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SRR953582_primary_scf7180002201925_449-1191
Len: 742 bp
Hits: 20
E-val: 3.80E-110
Sim: 92.09%
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XP_018974364.1 LOW QUALITY PROTEIN: T-complex-associated testis-expressed protein 1-like |
Other
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SRR953582_primary_scf7180002201948_1-1014
Len: 1,013 bp
Hits: 20
E-val: 4.30E-56
Sim: 89%
|
XP_018941270.1 LOW QUALITY PROTEIN: atypical kinase ADCK3, mitochondrial-like |
GO:0006744P:ubiquinone biosynthetic process GO:0016310P:phosphorylation GO:0005524F:ATP binding GO:0016301F:kinase activity GO:0043531F:ADP binding GO:0005739C:mitochondrion GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002201988_1022-1343
Len: 321 bp
Hits: 20
E-val: 1.10E-24
Sim: 100%
|
XP_003973218.1 protein transport protein Sec61 subunit alpha isoform 1 |
GO:0006616P:SRP-dependent cotranslational protein targeting to membrane, translocation GO:0021986P:habenula development GO:0031204P:post-translational protein targeting to membrane, translocation GO:0039019P:pronephric nephron development GO:0045048P:protein insertion into ER membrane GO:0005048F:signal sequence binding GO:0008320F:protein transmembrane transporter activity GO:0043022F:ribosome binding GO:0005784C:Sec61 translocon complex |
Membrane Transport
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SRR953582_primary_scf7180002202036_1-2124
Len: 2,123 bp
Hits: 20
E-val: 8.30E-17
Sim: 100%
|
XP_026136607.1probable phospholipid-transporting ATPase IA isoform X4 |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002202041_143-1064
Len: 921 bp
Hits: 20
E-val: 6.20E-25
Sim: 89.42%
|
XP_016140147.1 melanopsin-A-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007507P:heart development GO:0007601P:visual perception GO:0007602P:phototransduction GO:0009584P:detection of visible light GO:0030036P:actin cytoskeleton organization GO:0061061P:muscle structure development GO:0071482P:cellular response to light stimulus GO:1904059P:regulation of locomotor rhythm GO:0003779F:actin binding GO:0008020F:G protein-coupled photoreceptor activity GO:0046872F:metal ion binding GO:0051371F:muscle alpha-actinin binding GO:0001725C:stress fiber GO:0005886C:plasma membrane GO:0005912C:adherens junction GO:0030018C:Z disc GO:0031941C:filamentous actin |
Cell Signaling
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SRR953582_primary_scf7180002202049_1-1380
Len: 1,379 bp
Hits: 20
E-val: 1.30E-47
Sim: 62.37%
|
XP_018944285.1 nidogen-2-like |
GO:0007155P:cell adhesion GO:0060070P:canonical Wnt signaling pathway GO:0005509F:calcium ion binding GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002202082_1115-2314
Len: 1,199 bp
Hits: 20
E-val: 7.50E-07
Sim: 72.01%
|
XP_019954892.1 merlin |
GO:0000165P:MAPK cascade GO:0001707P:mesoderm formation GO:0007398P:ectoderm development GO:0007420P:brain development GO:0008285P:negative regulation of cell population proliferation GO:0010626P:negative regulation of Schwann cell proliferation GO:0014010P:Schwann cell proliferation GO:0014013P:regulation of gliogenesis GO:0021766P:hippocampus development GO:0022408P:negative regulation of cell-cell adhesion GO:0030036P:actin cytoskeleton organization GO:0031647P:regulation of protein stability GO:0033687P:osteoblast proliferation GO:0033689P:negative regulation of osteoblast proliferation GO:0035330P:regulation of hippo signaling GO:0042127P:regulation of cell population proliferation GO:0042475P:odontogenesis of dentin-containing tooth GO:0042981P:regulation of apoptotic process GO:0043409P:negative regulation of MAPK cascade GO:0045216P:cell-cell junction organization GO:0045597P:positive regulation of cell differentiation GO:0046426P:negative regulation of receptor signaling pathway via JAK-STAT GO:0050767P:regulation of neurogenesis GO:0051496P:positive regulation of stress fiber assembly GO:0051726P:regulation of cell cycle GO:0070306P:lens fiber cell differentiation GO:0072091P:regulation of stem cell proliferation GO:1900180P:regulation of protein localization to nucleus GO:2000177P:regulation of neural precursor cell proliferation GO:0003779F:actin binding GO:0005515F:protein binding GO:0001726C:ruffle GO:0005634C:nucleus GO:0005730C:nucleolus GO:0005737C:cytoplasm GO:0005769C:early endosome GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005912C:adherens junction GO:0030027C:lamellipodium GO:0030175C:filopodium GO:0030864C:cortical actin cytoskeleton GO:0032154C:cleavage furrow GO:0042995C:cell projection GO:0043005C:neuron projection GO:0044297C:cell body GO:0045177C:apical part of cell GO:0048471C:perinuclear region of cytoplasm GO:0098858C:actin-based cell projection |
Cell Signaling
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SRR953582_primary_scf7180002202152_1-1533
Len: 1,532 bp
Hits: 20
E-val: 1.90E-26
Sim: 95.29%
|
XP_016298787.1 acetyl-CoA carboxylase-like |
GO:0006633P:fatty acid biosynthetic process GO:2001295P:malonyl-CoA biosynthetic process GO:0003989F:acetyl-CoA carboxylase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005739C:mitochondrion |
Other
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SRR953582_primary_scf7180002202153_1-1486
Len: 1,485 bp
Hits: 20
E-val: 7.40E-12
Sim: 87.8%
|
XP_016102660.1 sodium/glucose cotransporter 1-like |
GO:0008645P:hexose transmembrane transport GO:0035725P:sodium ion transmembrane transport GO:0005412F:D-glucose:sodium symporter activity GO:0016324C:apical plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002202172_1-790
Len: 789 bp
Hits: 20
E-val: 4.70E-58
Sim: 73.61%
|
XP_018944149.1 Na(+)/H(+) exchange regulatory cofactor NHE-RF3-like |
GO:0006754P:ATP biosynthetic process GO:0055085P:transmembrane transport GO:0072659P:protein localization to plasma membrane GO:0005102F:signaling receptor binding GO:0043495F:protein-membrane adaptor activity GO:0140359F:ABC-type transporter activity GO:0005739C:mitochondrion GO:0016324C:apical plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002202176_1-920
Len: 919 bp
Hits: 20
E-val: 2.60E-39
Sim: 90.78%
|
XP_018951511.1 probable phospholipid-transporting ATPase VD |
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002202190_1-1087
Len: 1,086 bp
Hits: 20
E-val: 2.50E-65
Sim: 70.82%
|
XP_026139371.1SWI/SNF complex subunit SMARCC1-like isoform X2 |
GO:0003206P:cardiac chamber morphogenesis GO:0045893P:positive regulation of DNA-templated transcription GO:0060216P:definitive hemopoiesis GO:0042393F:histone binding GO:0005737C:cytoplasm GO:0016514C:SWI/SNF complex GO:0071564C:npBAF complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR953582_primary_scf7180002202279_975-1516
Len: 541 bp
Hits: 20
E-val: 2.80E-25
Sim: 95.48%
|
XP_018941169.1 WW domain-containing transcription regulator protein 1-like |
GO:0001501P:skeletal system development GO:0001570P:vasculogenesis GO:0003222P:ventricular trabecula myocardium morphogenesis GO:0003406P:retinal pigment epithelium development GO:0007155P:cell adhesion GO:0030509P:BMP signaling pathway GO:0034672P:anterior/posterior pattern specification involved in pronephros development GO:0035329P:hippo signaling GO:0045892P:negative regulation of DNA-templated transcription GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0046844P:chorion micropyle formation GO:0048387P:negative regulation of retinoic acid receptor signaling pathway GO:0048566P:embryonic digestive tract development GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0070121P:Kupffer's vesicle development GO:0072148P:epithelial cell fate commitment GO:1905590P:fibronectin fibril organization GO:0003713F:transcription coactivator activity GO:0003714F:transcription corepressor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005923C:bicellular tight junction |
Cell Signaling
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SRR953582_primary_scf7180002202393_1-771
Len: 770 bp
Hits: 20
E-val: 7.70E-37
Sim: 97.01%
|
XP_018980307.1 zinc finger MYM-type protein 4-like |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding |
DNA Metabolism
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SRR953582_primary_scf7180002202443_1-943
Len: 942 bp
Hits: 20
E-val: 6.70E-27
Sim: 94.85%
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XP_026058449.1histone acetyltransferase KAT2A |
GO:0001819P:positive regulation of cytokine production GO:0007507P:heart development GO:0007616P:long-term memory GO:0018393P:internal peptidyl-lysine acetylation GO:0040029P:epigenetic regulation of gene expression GO:0045589P:regulation of regulatory T cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048167P:regulation of synaptic plasticity GO:0060173P:limb development GO:0060349P:bone morphogenesis GO:0061035P:regulation of cartilage development GO:0106227P:peptidyl-lysine glutarylation GO:1903010P:regulation of bone development GO:0003682F:chromatin binding GO:0003713F:transcription coactivator activity GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0106078F:histone succinyltransferase activity GO:0106229F:histone glutaryltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005813C:centrosome GO:0045252C:oxoglutarate dehydrogenase complex GO:0140672C:ATAC complex |
Transcription Regulation
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SRR953582_primary_scf7180002202640_1-1479
Len: 1,478 bp
Hits: 20
E-val: 1.50E-17
Sim: 99.17%
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XP_026066479.1T-box transcription factor TBX5-like isoform X2 |
GO:0001708P:cell fate specification GO:0001947P:heart looping GO:0003146P:heart jogging GO:0003218P:cardiac left ventricle formation GO:0006357P:regulation of transcription by RNA polymerase II GO:0021554P:optic nerve development GO:0033339P:pectoral fin development GO:0045893P:positive regulation of DNA-templated transcription GO:0060042P:retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002202644_121-1283
Len: 1,162 bp
Hits: 20
E-val: 4.90E-19
Sim: 53.86%
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XP_018961558.1 choline transporter-like protein 2 |
GO:0055085P:transmembrane transport GO:0015297F:antiporter activity GO:0022857F:transmembrane transporter activity GO:0005739C:mitochondrion GO:0005741C:mitochondrial outer membrane GO:0005886C:plasma membrane GO:0016020C:membrane |
Membrane Transport
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SRR953582_primary_scf7180002202676_1-811
Len: 810 bp
Hits: 20
E-val: 2.00E-67
Sim: 70.5%
|
XP_018968139.1 homeobox protein engrailed-1a-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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