Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR953582_primary_scf7180002230628_708-1055
Len: 347 bp
Hits: 20
E-val: 1.00E-41
Sim: 92.59%
|
XP_016369926.1 rho GTPase-activating protein 42-like |
Other
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SRR953582_primary_scf7180002230643_1-646
Len: 645 bp
Hits: 20
E-val: 1.30E-18
Sim: 98.25%
|
XP_022537240.1polypyrimidine tract-binding protein 3 |
Other
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|
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SRR953582_primary_scf7180002230792_1-1247
Len: 1,246 bp
Hits: 20
E-val: 1.40E-27
Sim: 82.7%
|
XP_018957912.1 docking protein 1-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007265P:Ras protein signal transduction GO:0043410P:positive regulation of MAPK cascade GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002230957_75-841
Len: 766 bp
Hits: 20
E-val: 1.30E-23
Sim: 96.69%
|
XP_016134194.1 sorting nexin-12-like, partial |
GO:0015031P:protein transport GO:0032456P:endocytic recycling GO:0034499P:late endosome to Golgi transport GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0030904C:retromer complex GO:0031901C:early endosome membrane |
Other
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SRR953582_primary_scf7180002231108_449-862
Len: 413 bp
Hits: 20
E-val: 1.40E-50
Sim: 77.07%
|
XP_018981611.1 tRNA-splicing ligase RtcB homolog |
GO:0006388P:tRNA splicing, via endonucleolytic cleavage and ligation GO:0008452F:RNA ligase activity GO:0043167F:ion binding GO:0005634C:nucleus GO:0072669C:tRNA-splicing ligase complex |
DNA Metabolism
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SRR953582_primary_scf7180002231195_1-1099
Len: 1,098 bp
Hits: 20
E-val: 3.30E-17
Sim: 79.23%
|
XP_016414175.1 LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3-like |
GO:0035973P:aggrephagy GO:0008270F:zinc ion binding |
Other
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SRR953582_primary_scf7180002231530_1-522
Len: 521 bp
Hits: 20
E-val: 1.40E-26
Sim: 84.57%
|
XP_018961343.1 peptidyl-prolyl cis-trans isomerase FKBP9-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006457P:protein folding GO:0005509F:calcium ion binding GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0005783C:endoplasmic reticulum |
Transcription Regulation
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SRR953582_primary_scf7180002231552_1-640
Len: 639 bp
Hits: 20
E-val: 1.30E-18
Sim: 99.57%
|
XP_026058679.1bromodomain-containing protein 1-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding GO:0070776C:MOZ/MORF histone acetyltransferase complex |
Transcription Regulation
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SRR953582_primary_scf7180002231571_1-905
Len: 904 bp
Hits: 20
E-val: 6.80E-101
Sim: 89.76%
|
XP_016303264.1 probable proline--tRNA ligase, mitochondrial |
GO:0006433P:prolyl-tRNA aminoacylation GO:0004827F:proline-tRNA ligase activity GO:0005524F:ATP binding GO:0005739C:mitochondrion |
DNA Metabolism
|
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SRR953582_primary_scf7180002231887_1-941
Len: 940 bp
Hits: 20
E-val: 5.20E-19
Sim: 96.21%
|
XP_016097814.1 SH3 domain-binding protein 2-like |
GO:0006898P:receptor-mediated endocytosis GO:0007165P:signal transduction GO:0005509F:calcium ion binding GO:0017124F:SH3 domain binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002231998_1-1048
Len: 1,047 bp
Hits: 20
E-val: 2.20E-42
Sim: 99.57%
|
XP_010785743.1 transcription initiation factor IIB-like |
GO:0001174P:transcriptional start site selection at RNA polymerase II promoter GO:0006338P:chromatin remodeling GO:0006413P:translational initiation GO:0051123P:RNA polymerase II preinitiation complex assembly GO:1990114P:RNA polymerase II core complex assembly GO:0000979F:RNA polymerase II core promoter sequence-specific DNA binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0016251F:RNA polymerase II general transcription initiation factor activity GO:0017025F:TBP-class protein binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0097550C:transcription preinitiation complex |
Transcription Regulation
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SRR953582_primary_scf7180002232084_584-979
Len: 395 bp
Hits: 20
E-val: 8.70E-37
Sim: 96.15%
|
XP_026124186.126S proteasome non-ATPase regulatory subunit 7-like |
GO:0021551P:central nervous system morphogenesis GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1904888P:cranial skeletal system development GO:0008237F:metallopeptidase activity GO:0005838C:proteasome regulatory particle |
Protein Degradation
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SRR953582_primary_scf7180002232205_395-906
Len: 511 bp
Hits: 20
E-val: 5.30E-18
Sim: 100%
|
RXN19147.1transmembrane protein 230 |
GO:0048489P:synaptic vesicle transport GO:0060837P:blood vessel endothelial cell differentiation GO:0005769C:early endosome GO:0005770C:late endosome GO:0005776C:autophagosome GO:0005794C:Golgi apparatus GO:0008021C:synaptic vesicle GO:0016020C:membrane GO:0055037C:recycling endosome |
Other
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SRR953582_primary_scf7180002232266_1-1165
Len: 1,164 bp
Hits: 20
E-val: 4.50E-41
Sim: 100%
|
XP_018930163.1 LOW QUALITY PROTEIN: protein-methionine sulfoxide oxidase mical3a-like |
GO:0006887P:exocytosis GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR953582_primary_scf7180002232366_1-935
Len: 934 bp
Hits: 20
E-val: 1.90E-26
Sim: 70.68%
|
XP_022527628.1mediator of RNA polymerase II transcription subunit 12 |
GO:0001822P:kidney development GO:0002761P:regulation of myeloid leukocyte differentiation GO:0007492P:endoderm development GO:0007507P:heart development GO:0014032P:neural crest cell development GO:0021591P:ventricular system development GO:0021654P:rhombomere boundary formation GO:0021954P:central nervous system neuron development GO:0021982P:pineal gland development GO:0021986P:habenula development GO:0030901P:midbrain development GO:0035118P:embryonic pectoral fin morphogenesis GO:0043583P:ear development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0050935P:iridophore differentiation GO:0003700F:DNA-binding transcription factor activity GO:0003713F:transcription coactivator activity GO:0140585F:promoter-enhancer loop anchoring activity GO:0016592C:mediator complex |
Transcription Regulation
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SRR953582_primary_scf7180002232688_1-1791
Len: 1,790 bp
Hits: 20
E-val: 2.20E-50
Sim: 72.29%
|
XP_018967335.1 short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1 |
GO:0033539P:fatty acid beta-oxidation using acyl-CoA dehydrogenase GO:0046359P:butyrate catabolic process GO:0016937F:short-chain fatty acyl-CoA dehydrogenase activity GO:0005739C:mitochondrion |
Other
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SRR953582_primary_scf7180002232755_1-873
Len: 872 bp
Hits: 20
E-val: 1.30E-32
Sim: 62.56%
|
XP_026129975.1endoplasmic reticulum aminopeptidase 1-like |
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
Protein Degradation
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SRR953582_primary_scf7180002232929_1-679
Len: 678 bp
Hits: 20
E-val: 2.40E-119
Sim: 86.13%
|
XP_018926758.1 8-oxo-dGDP phosphatase NUDT18-like isoform X1 |
GO:0046057P:dADP catabolic process GO:0046067P:dGDP catabolic process GO:0046712P:GDP catabolic process GO:0044715F:8-oxo-dGDP phosphatase activity GO:0044716F:8-oxo-GDP phosphatase activity GO:0044717F:8-hydroxy-dADP phosphatase activity GO:0046872F:metal ion binding |
Other
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SRR953582_primary_scf7180002232953_789-1150
Len: 361 bp
Hits: 20
E-val: 2.20E-39
Sim: 97.92%
|
RXN20722.1estrogen-related receptor gamma isoform X5 |
GO:0006355P:regulation of DNA-templated transcription GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0042562F:hormone binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Cell Signaling
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SRR953582_primary_scf7180002233097_1-838
Len: 837 bp
Hits: 20
E-val: 3.10E-39
Sim: 98.61%
|
XP_018927140.1 NT-3 growth factor receptor-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007417P:central nervous system development GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010976P:positive regulation of neuron projection development GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0038179P:neurotrophin signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:1990090P:cellular response to nerve growth factor stimulus GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0043121F:neurotrophin binding GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0030424C:axon GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002233126_39-1524
Len: 1,485 bp
Hits: 20
E-val: 2.40E-39
Sim: 55%
|
RXN37202.1solute carrier organic anion transporter family member 1C1-like isoform X1 |
GO:0006811P:monoatomic ion transport GO:0043252P:sodium-independent organic anion transport GO:0055085P:transmembrane transport GO:0015347F:obsolete sodium-independent organic anion transmembrane transporter activity GO:0022857F:transmembrane transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016323C:basolateral plasma membrane |
Ion Transport
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SRR953582_primary_scf7180002233361_1-723
Len: 722 bp
Hits: 20
E-val: 6.10E-12
Sim: 100%
|
XP_026142203.1LOW QUALITY PROTEIN: ral GTPase-activating protein subunit alpha-1-like |
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002233383_1-973
Len: 972 bp
Hits: 20
E-val: 2.90E-89
Sim: 77.2%
|
XP_018961593.1 MKL/myocardin-like protein 1 isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002233408_186-969
Len: 783 bp
Hits: 20
E-val: 8.90E-25
Sim: 99%
|
XP_026074562.1fer-1-like protein 6 |
GO:0007009P:plasma membrane organization GO:0036211P:protein modification process GO:0046872F:metal ion binding GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002233563_1-1328
Len: 1,327 bp
Hits: 20
E-val: 7.50E-16
Sim: 97.31%
|
XP_026129443.1T-lymphoma invasion and metastasis-inducing protein 1-like isoform X2 |
GO:0007264P:small GTPase-mediated signal transduction GO:0050772P:positive regulation of axonogenesis GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0045202C:synapse |
Other
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