Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002239891_1-382
Len: 381 bp
Hits: 20
E-val: 8.00E-11
Sim: 91.03%
|
XP_016302775.1 2-oxoglutarate dehydrogenase, mitochondrial-like |
GO:0006096P:glycolytic process GO:0006099P:tricarboxylic acid cycle GO:0004591F:oxoglutarate dehydrogenase (succinyl-transferring) activity GO:0004683F:calcium/calmodulin-dependent protein kinase activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0030976F:thiamine pyrophosphate binding GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0045252C:oxoglutarate dehydrogenase complex |
Signal Transduction
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SRR953582_primary_scf7180002240208_435-1149
Len: 714 bp
Hits: 20
E-val: 3.70E-94
Sim: 95.61%
|
XP_016099726.1 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1 |
GO:0005975P:carbohydrate metabolic process GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0015018F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0005576C:extracellular region |
Metabolism
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SRR953582_primary_scf7180002240226_1-866
Len: 865 bp
Hits: 20
E-val: 5.20E-34
Sim: 61.03%
|
AYN64431.1interferon regulatory factor |
GO:0002376P:immune system process GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000976F:transcription cis-regulatory region binding GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002240360_1-1427
Len: 1,426 bp
Hits: 20
E-val: 6.40E-29
Sim: 88.71%
|
XP_016366890.1 cytosolic carboxypeptidase 4-like |
GO:0006508P:proteolysis GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0015631F:tubulin binding GO:0005829C:cytosol GO:0015630C:microtubule cytoskeleton |
Protein Degradation
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SRR953582_primary_scf7180002240439_1-716
Len: 715 bp
Hits: 20
E-val: 2.40E-32
Sim: 74.71%
|
XP_018969506.1 cadherin-23-like |
GO:0006897P:endocytosis GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0035678P:neuromast hair cell morphogenesis GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound GO:0050957P:equilibrioception GO:0060117P:auditory receptor cell development GO:0060122P:inner ear receptor cell stereocilium organization GO:0061512P:protein localization to cilium GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0022857F:transmembrane transporter activity GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0005929C:cilium GO:0016342C:catenin complex |
Cell Signaling
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SRR953582_primary_scf7180002240492_1-693
Len: 692 bp
Hits: 20
E-val: 1.00E-120
Sim: 97.72%
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XP_018926433.1 LOW QUALITY PROTEIN: N-myc proto-oncogene protein-like |
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002240663_1-1119
Len: 1,118 bp
Hits: 20
E-val: 1.00E-37
Sim: 66.48%
|
XP_026102052.1plexin-B1-like, partial |
GO:0022603P:regulation of anatomical structure morphogenesis GO:0048675P:axon extension GO:0050794P:regulation of cellular process GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002241097_422-827
Len: 405 bp
Hits: 20
E-val: 2.20E-35
Sim: 99.44%
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XP_018952328.1 synaptotagmin-2-like |
GO:0017158P:regulation of calcium ion-dependent exocytosis GO:0048488P:synaptic vesicle endocytosis GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0099502P:calcium-dependent activation of synaptic vesicle fusion GO:2000300P:regulation of synaptic vesicle exocytosis GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0061891F:calcium ion sensor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0030672C:synaptic vesicle membrane GO:0031045C:dense core granule |
Other
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SRR953582_primary_scf7180002241372_1-1085
Len: 1,084 bp
Hits: 20
E-val: 4.70E-48
Sim: 66.72%
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XP_018972061.1 LOW QUALITY PROTEIN: cytochrome P450 2M1-like |
Other
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SRR953582_primary_scf7180002241828_1-1141
Len: 1,140 bp
Hits: 1
E-val: 3.20E-15
Sim: 95.74%
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XP_026113205.1serine/threonine-protein kinase MRCK beta-like |
GO:0031032P:actomyosin structure organization GO:0004674F:protein serine/threonine kinase activity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Signal Transduction
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SRR953582_primary_scf7180002241982_1-997
Len: 996 bp
Hits: 20
E-val: 3.90E-25
Sim: 98.63%
|
AGM34043.1caspase-9 |
GO:0000448P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0006508P:proteolysis GO:0008630P:intrinsic apoptotic signaling pathway in response to DNA damage GO:0043525P:positive regulation of neuron apoptotic process GO:0004197F:cysteine-type endopeptidase activity GO:0005524F:ATP binding GO:0051731F:polynucleotide 5'-hydroxyl-kinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Signal Transduction
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SRR953582_primary_scf7180002242098_1-979
Len: 978 bp
Hits: 20
E-val: 1.10E-27
Sim: 57.36%
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KPP79288.1ubiquitin-conjugating enzyme E2 J1-like |
GO:0000209P:protein polyubiquitination GO:0036503P:ERAD pathway GO:0061631F:ubiquitin conjugating enzyme activity GO:0005634C:nucleus GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002242099_1-868
Len: 867 bp
Hits: 20
E-val: 8.40E-125
Sim: 82.68%
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XP_018921723.1 probable N-acetyltransferase CML3 |
GO:0008080F:N-acetyltransferase activity GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002242516_1-697
Len: 696 bp
Hits: 20
E-val: 4.50E-36
Sim: 82.43%
|
XP_018951143.1 piezo-type mechanosensitive ion channel component 2-like |
GO:0006021P:inositol biosynthetic process GO:0034220P:monoatomic ion transmembrane transport GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0008381F:mechanosensitive monoatomic ion channel activity GO:0008934F:inositol monophosphate 1-phosphatase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Ion Transport
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SRR953582_primary_scf7180002242552_364-878
Len: 514 bp
Hits: 20
E-val: 1.10E-15
Sim: 89.33%
|
XP_018972203.1 laminin subunit alpha-3-like isoform X1 |
GO:0007411P:axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0030155P:regulation of cell adhesion GO:0030334P:regulation of cell migration GO:0034446P:substrate adhesion-dependent cell spreading GO:0045995P:regulation of embryonic development GO:0070831P:basement membrane assembly GO:0005102F:signaling receptor binding GO:0005576C:extracellular region GO:0043256C:laminin complex |
Cell Signaling
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SRR953582_primary_scf7180002243028_1-1135
Len: 1,134 bp
Hits: 20
E-val: 1.10E-26
Sim: 95.24%
|
XP_016402364.1 ras-related protein Rab-27A isoform X1 |
GO:0006887P:exocytosis GO:0032456P:endocytic recycling GO:0060271P:cilium assembly GO:0098969P:neurotransmitter receptor transport to postsynaptic membrane GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0005770C:late endosome GO:0005886C:plasma membrane GO:0008021C:synaptic vesicle GO:0030140C:trans-Golgi network transport vesicle |
Cell Signaling
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SRR953582_primary_scf7180002243383_145-450
Len: 305 bp
Hits: 20
E-val: 1.40E-47
Sim: 99%
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XP_018966003.1 poly(U)-binding-splicing factor PUF60-B isoform X1 |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0006376P:mRNA splice site recognition GO:0003723F:RNA binding GO:0071011C:precatalytic spliceosome GO:0071013C:catalytic step 2 spliceosome |
Other
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SRR953582_primary_scf7180002243392_1-1198
Len: 1,197 bp
Hits: 20
E-val: 2.50E-18
Sim: 64.41%
|
XP_018935028.1 solute carrier family 35 member B1-like |
GO:0015711P:organic anion transport GO:0090481P:pyrimidine nucleotide-sugar transmembrane transport GO:0015165F:pyrimidine nucleotide-sugar transmembrane transporter activity GO:0005783C:endoplasmic reticulum GO:0031090C:organelle membrane |
Ion Transport
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SRR953582_primary_scf7180002243399_1-1739
Len: 1,738 bp
Hits: 20
E-val: 2.70E-29
Sim: 96.6%
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XP_016097923.1 interactor protein for cytohesin exchange factors 1-like isoform X1 |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002243408_1-741
Len: 740 bp
Hits: 20
E-val: 8.40E-41
Sim: 90.51%
|
XP_026126546.1obscurin-like |
GO:0007517P:muscle organ development GO:0098609P:cell-cell adhesion GO:0004672F:protein kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0030018C:Z disc |
Signal Transduction
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SRR953582_primary_scf7180002243901_441-1784
Len: 1,343 bp
Hits: 20
E-val: 5.20E-49
Sim: 60.14%
|
XP_018943420.1 striated muscle preferentially expressed protein kinase-like |
GO:0004674F:protein serine/threonine kinase activity GO:0140996F:histone H3 kinase activity |
Signal Transduction
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SRR953582_primary_scf7180002244102_1-1314
Len: 1,313 bp
Hits: 4
E-val: 2.10E-10
Sim: 58.7%
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XP_016107031.1 reversion-inducing cysteine-rich protein with Kazal motifs-like |
GO:0051726P:regulation of cell cycle GO:0060828P:regulation of canonical Wnt signaling pathway GO:0090049P:regulation of cell migration involved in sprouting angiogenesis GO:1990791P:dorsal root ganglion development GO:0004866F:endopeptidase inhibitor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002244240_1-842
Len: 841 bp
Hits: 20
E-val: 6.90E-23
Sim: 90.82%
|
XP_018922692.1 p21-activated protein kinase-interacting protein 1-like |
GO:0000463P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0007064P:mitotic sister chromatid cohesion GO:0009968P:negative regulation of signal transduction GO:0004860F:protein kinase inhibitor activity GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0061733F:protein-lysine-acetyltransferase activity GO:0000785C:chromatin GO:0005730C:nucleolus |
Signal Transduction
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SRR953582_primary_scf7180002244273_1-1630
Len: 1,629 bp
Hits: 20
E-val: 3.30E-21
Sim: 86.13%
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XP_016400057.1 semaphorin-4A-like isoform X1 |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002244418_1-1142
Len: 1,141 bp
Hits: 20
E-val: 9.00E-18
Sim: 95.95%
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XP_018924000.1 LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0042273P:ribosomal large subunit biogenesis GO:0003714F:transcription corepressor activity GO:0042393F:histone binding GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0030690C:Noc1p-Noc2p complex GO:0030691C:Noc2p-Noc3p complex |
Transcription Regulation
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