Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002249343_1-721
Len: 720 bp
Hits: 20
E-val: 3.80E-62
Sim: 66.71%
|
XP_018977242.1 low-density lipoprotein receptor-related protein 2-like |
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0048259P:regulation of receptor-mediated endocytosis GO:0070293P:renal absorption GO:0005488F:binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002249470_1-1140
Len: 1,139 bp
Hits: 20
E-val: 1.90E-129
Sim: 94.09%
|
XP_018963518.1 ETS domain-containing protein Elk-4-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002249476_1-1003
Len: 1,002 bp
Hits: 20
E-val: 1.10E-06
Sim: 87.6%
|
XP_021166850.1LOW QUALITY PROTEIN: dystonin |
GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0045110P:intermediate filament bundle assembly GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0005509F:calcium ion binding GO:0008017F:microtubule binding GO:0046872F:metal ion binding GO:1990254F:keratin filament binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005874C:microtubule GO:0005882C:intermediate filament GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0016020C:membrane GO:0030054C:cell junction GO:0030056C:hemidesmosome GO:0042995C:cell projection GO:0045095C:keratin filament |
Other
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SRR953582_primary_scf7180002250039_60-536
Len: 476 bp
Hits: 20
E-val: 8.30E-66
Sim: 74.01%
|
XP_018964756.1 zinc finger and BTB domain-containing protein 7B-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
Transcription Regulation
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SRR953582_primary_scf7180002250049_1-1267
Len: 1,266 bp
Hits: 20
E-val: 3.90E-30
Sim: 99.74%
|
XP_018952476.1 grainyhead-like protein 3 homolog, partial |
GO:0001843P:neural tube closure GO:0008544P:epidermis development GO:0010669P:epithelial structure maintenance GO:0030917P:midbrain-hindbrain boundary development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048703P:embryonic viscerocranium morphogenesis GO:0060325P:face morphogenesis GO:0071466P:cellular response to xenobiotic stimulus GO:0090504P:epiboly GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002250050_560-1068
Len: 508 bp
Hits: 20
E-val: 8.10E-35
Sim: 82.97%
|
XP_016304982.1 PHD finger protein 10-like |
Other
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SRR953582_primary_scf7180002250065_206-1109
Len: 903 bp
Hits: 20
E-val: 1.30E-30
Sim: 99.25%
|
XP_018975463.1 LOW QUALITY PROTEIN: phosphatase and actin regulator 4B-like |
GO:0001755P:neural crest cell migration GO:0001843P:neural tube closure GO:0007266P:Rho protein signal transduction GO:0030036P:actin cytoskeleton organization GO:0048484P:enteric nervous system development GO:0051726P:regulation of cell cycle GO:0061386P:closure of optic fissure GO:2001045P:negative regulation of integrin-mediated signaling pathway GO:0003779F:actin binding GO:0008157F:protein phosphatase 1 binding GO:0072542F:protein phosphatase activator activity GO:0005737C:cytoplasm GO:0030027C:lamellipodium |
Cell Signaling
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SRR953582_primary_scf7180002250076_461-862
Len: 401 bp
Hits: 20
E-val: 1.40E-37
Sim: 58.15%
|
XP_018943138.1 fibrinogen-like protein 1 |
GO:0007596P:blood coagulation GO:0050789P:regulation of biological process GO:0005576C:extracellular region |
Other
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SRR953582_primary_scf7180002250130_1-1197
Len: 1,196 bp
Hits: 20
E-val: 2.50E-42
Sim: 66.54%
|
XP_018925156.1 synaptotagmin-2-like |
GO:0016079P:synaptic vesicle exocytosis GO:1903305P:regulation of regulated secretory pathway GO:0005515F:protein binding GO:0005543F:phospholipid binding GO:0043167F:ion binding GO:0016020C:membrane GO:0045202C:synapse GO:0070382C:exocytic vesicle |
Other
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SRR953582_primary_scf7180002250148_1-816
Len: 815 bp
Hits: 20
E-val: 2.40E-28
Sim: 100%
|
XP_026077011.1adiponectin receptor protein 1-like |
GO:0033211P:adiponectin-activated signaling pathway GO:0038023F:signaling receptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002250459_1-1202
Len: 1,201 bp
Hits: 20
E-val: 2.20E-14
Sim: 86.09%
|
XP_018924905.1 LOW QUALITY PROTEIN: G patch domain-containing protein 3 |
GO:0032480P:negative regulation of type I interferon production GO:0039536P:negative regulation of RIG-I signaling pathway GO:0045893P:positive regulation of DNA-templated transcription GO:0046856P:phosphatidylinositol dephosphorylation GO:0003676F:nucleic acid binding GO:0043812F:phosphatidylinositol-4-phosphate phosphatase activity GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
Cell Signaling
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SRR953582_primary_scf7180002250474_1-1131
Len: 1,130 bp
Hits: 20
E-val: 8.10E-27
Sim: 96.77%
|
XP_003965062.1 liprin-alpha-3-like |
Other
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SRR953582_primary_scf7180002250649_1-553
Len: 552 bp
Hits: 20
E-val: 2.20E-22
Sim: 98.87%
|
XP_018948457.1 keratin, type I cytoskeletal 18-like |
GO:0005198F:structural molecule activity GO:0005882C:intermediate filament |
Other
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SRR953582_primary_scf7180002250849_1-1119
Len: 1,118 bp
Hits: 20
E-val: 2.60E-09
Sim: 94.32%
|
XP_026112817.1tyrosine--tRNA ligase, cytoplasmic-like isoform X3 |
GO:0006437P:tyrosyl-tRNA aminoacylation GO:0000049F:tRNA binding GO:0004831F:tyrosine-tRNA ligase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR953582_primary_scf7180002251508_1-1048
Len: 1,047 bp
Hits: 20
E-val: 2.10E-21
Sim: 91.78%
|
XP_018949130.1 dnaJ homolog subfamily A member 2-like |
GO:0008284P:positive regulation of cell population proliferation GO:0009408P:response to heat GO:0042026P:protein refolding GO:0001671F:ATPase activator activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0030544F:Hsp70 protein binding GO:0051082F:unfolded protein binding GO:0005829C:cytosol GO:0016020C:membrane |
Other
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SRR953582_primary_scf7180002251803_294-992
Len: 698 bp
Hits: 20
E-val: 9.60E-79
Sim: 86.91%
|
XP_016101968.1 retinitis pigmentosa 1-like 1 protein isoform X1 |
GO:0035082P:axoneme assembly GO:0035556P:intracellular signal transduction GO:0042461P:photoreceptor cell development GO:0060041P:retina development in camera-type eye GO:0005930C:axoneme |
Cell Signaling
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SRR953582_primary_scf7180002252858_1-1158
Len: 1,157 bp
Hits: 20
E-val: 5.40E-26
Sim: 97.2%
|
XP_026060008.1complexin-1-like |
GO:0031630P:regulation of synaptic vesicle fusion to presynaptic active zone membrane GO:0046928P:regulation of neurotransmitter secretion GO:0019905F:syntaxin binding GO:0031201C:SNARE complex GO:0043195C:terminal bouton |
Other
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SRR953582_primary_scf7180002253129_267-969
Len: 702 bp
Hits: 20
E-val: 1.50E-79
Sim: 86.76%
|
XP_018920515.1 caspase-8-like |
GO:0006508P:proteolysis GO:0043525P:positive regulation of neuron apoptotic process GO:0051604P:protein maturation GO:0004197F:cysteine-type endopeptidase activity GO:0005737C:cytoplasm GO:0031265C:CD95 death-inducing signaling complex |
Cell Signaling
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SRR953582_primary_scf7180002253285_1-671
Len: 670 bp
Hits: 20
E-val: 1.90E-31
Sim: 95.16%
|
XP_018980162.1 homeobox protein Dlx5a-like |
GO:0001841P:neural tube formation GO:0006357P:regulation of transcription by RNA polymerase II GO:0009612P:response to mechanical stimulus GO:0021628P:olfactory nerve formation GO:0030154P:cell differentiation GO:0033339P:pectoral fin development GO:0035141P:medial fin morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0071699P:olfactory placode morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002253312_1-713
Len: 712 bp
Hits: 20
E-val: 2.80E-17
Sim: 91.45%
|
BAA36619.1complement C3-H1 |
GO:0004866F:endopeptidase inhibitor activity GO:0005615C:extracellular space |
Protein Degradation
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SRR953582_primary_scf7180002253334_1-1356
Len: 1,355 bp
Hits: 20
E-val: 9.10E-25
Sim: 94.43%
|
XP_018959872.1 actin-binding LIM protein 1-like isoform X1 |
GO:0007010P:cytoskeleton organization GO:0030032P:lamellipodium assembly GO:0060271P:cilium assembly GO:0046872F:metal ion binding GO:0051015F:actin filament binding GO:0001725C:stress fiber GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002253432_1-542
Len: 541 bp
Hits: 20
E-val: 6.00E-28
Sim: 94.21%
|
XP_016411021.1 basement membrane-specific heparan sulfate proteoglycan core protein-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0070593P:dendrite self-avoidance GO:0008046F:axon guidance receptor activity GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR953582_primary_scf7180002253527_238-921
Len: 683 bp
Hits: 20
E-val: 4.60E-86
Sim: 95.37%
|
XP_018972923.1 ras-related protein Rab-38-like isoform X1 |
GO:0006955P:immune response GO:0007165P:signal transduction GO:0008333P:endosome to lysosome transport GO:0060326P:cell chemotaxis GO:0090385P:phagosome-lysosome fusion GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008009F:chemokine activity GO:0005615C:extracellular space GO:0005764C:lysosome GO:0005770C:late endosome GO:0005802C:trans-Golgi network GO:0016020C:membrane GO:0045335C:phagocytic vesicle |
Other
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SRR953582_primary_scf7180002253929_1-672
Len: 671 bp
Hits: 20
E-val: 2.30E-21
Sim: 90.99%
|
XP_016150497.1 neuroblastoma-amplified sequence |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0015031P:protein transport GO:0048703P:embryonic viscerocranium morphogenesis GO:2000623P:negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000149F:SNARE binding GO:0070939C:Dsl1/NZR complex |
Other
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SRR953582_primary_scf7180002254017_101-802
Len: 701 bp
Hits: 20
E-val: 2.50E-111
Sim: 82.54%
|
XP_016403251.1 protein FAM63A-like |
GO:0006338P:chromatin remodeling GO:0006508P:proteolysis GO:0071108P:protein K48-linked deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0016807F:cysteine-type carboxypeptidase activity GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0140934F:histone deubiquitinase activity GO:1990380F:K48-linked deubiquitinase activity GO:0005829C:cytosol GO:0071944C:cell periphery |
Protein Degradation
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