Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002254148_1-686
Len: 685 bp
Hits: 20
E-val: 5.60E-23
Sim: 89.8%
|
XP_018919004.1 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like |
GO:0006302P:double-strand break repair GO:0051276P:chromosome organization GO:0060216P:definitive hemopoiesis GO:0060348P:bone development GO:0005524F:ATP binding GO:0005694C:chromosome |
DNA Metabolism
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SRR953582_primary_scf7180002254298_1-782
Len: 781 bp
Hits: 20
E-val: 3.60E-58
Sim: 96.75%
|
XP_018920533.1 B9 domain-containing protein 2-like |
GO:0001736P:establishment of planar polarity GO:0007163P:establishment or maintenance of cell polarity GO:0036372P:opsin transport GO:0060271P:cilium assembly GO:0043015F:gamma-tubulin binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0036038C:MKS complex GO:0036064C:ciliary basal body |
Other
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SRR953582_primary_scf7180002254343_313-1255
Len: 942 bp
Hits: 20
E-val: 2.10E-97
Sim: 71.43%
|
XP_018925679.1 transcription factor Spi-C-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030154P:cell differentiation GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002254702_1-936
Len: 935 bp
Hits: 20
E-val: 4.00E-56
Sim: 61.46%
|
XP_018961888.1 LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4-like |
GO:0051276P:chromosome organization GO:0043229C:intracellular organelle |
Other
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SRR953582_primary_scf7180002254806_611-916
Len: 305 bp
Hits: 20
E-val: 1.30E-51
Sim: 98.27%
|
XP_018973354.1 tyrosine-protein kinase transmembrane receptor ROR2-like |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0016055P:Wnt signaling pathway GO:0060027P:convergent extension involved in gastrulation GO:0004714F:transmembrane receptor protein tyrosine kinase activity GO:0005524F:ATP binding GO:0017147F:Wnt-protein binding GO:0046982F:protein heterodimerization activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043235C:receptor complex |
Signal Transduction
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SRR953582_primary_scf7180002254860_1-775
Len: 774 bp
Hits: 20
E-val: 1.50E-24
Sim: 97.04%
|
XP_018922037.1 LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like |
GO:0036158P:outer dynein arm assembly GO:0060294P:cilium movement involved in cell motility GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005874C:microtubule GO:0036157C:outer dynein arm GO:0097729C:9+2 motile cilium |
Other
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SRR953582_primary_scf7180002254918_184-712
Len: 528 bp
Hits: 20
E-val: 3.50E-41
Sim: 68.13%
|
XP_018951097.1 gamma-tubulin complex component 4-like |
GO:0000278P:mitotic cell cycle GO:0007020P:microtubule nucleation GO:0031122P:cytoplasmic microtubule organization GO:0042670P:retinal cone cell differentiation GO:0051225P:spindle assembly GO:0051321P:meiotic cell cycle GO:0060221P:retinal rod cell differentiation GO:0043015F:gamma-tubulin binding GO:0051011F:microtubule minus-end binding GO:0000930C:gamma-tubulin complex |
Other
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SRR953582_primary_scf7180002255064_1-1184
Len: 1,183 bp
Hits: 20
E-val: 8.20E-38
Sim: 97.13%
|
XP_018929497.1 receptor-type tyrosine-protein phosphatase delta-like |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002255238_1-1100
Len: 1,099 bp
Hits: 20
E-val: 1.60E-19
Sim: 99.73%
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XP_016416567.1 LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3 |
Other
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SRR953582_primary_scf7180002255352_1-693
Len: 692 bp
Hits: 20
E-val: 1.10E-23
Sim: 88.31%
|
XP_018979632.1 LOW QUALITY PROTEIN: double-stranded RNA-specific editase 1-like, partial |
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
Other
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SRR953582_primary_scf7180002255821_366-1081
Len: 715 bp
Hits: 20
E-val: 6.70E-35
Sim: 91.14%
|
RXN08621.1putative E3 ubiquitin- ligase HERC1 |
GO:0007411P:axon guidance GO:0008582P:regulation of synaptic assembly at neuromuscular junction GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005886C:plasma membrane |
DNA Metabolism
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SRR953582_primary_scf7180002256011_209-1097
Len: 888 bp
Hits: 20
E-val: 8.90E-13
Sim: 99.09%
|
XP_016091027.1 kinesin-like protein KIF3A isoform X1 |
GO:0007018P:microtubule-based movement GO:0007219P:Notch signaling pathway GO:0035845P:photoreceptor cell outer segment organization GO:0045494P:photoreceptor cell maintenance GO:0046907P:intracellular transport GO:0060271P:cilium assembly GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005871C:kinesin complex GO:0005874C:microtubule |
Cell Signaling
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SRR953582_primary_scf7180002256296_1-838
Len: 837 bp
Hits: 20
E-val: 4.60E-11
Sim: 52.77%
|
XP_016375454.1 OCIA domain-containing protein 1-like |
GO:2000736P:regulation of stem cell differentiation GO:0005768C:endosome |
Other
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SRR953582_primary_scf7180002256690_1-1064
Len: 1,063 bp
Hits: 20
E-val: 2.50E-22
Sim: 57.4%
|
XP_022527582.1myotubularin-related protein 5 isoform X4 |
GO:0032483P:regulation of Rab protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm GO:0031410C:cytoplasmic vesicle |
Other
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SRR953582_primary_scf7180002256819_1-1359
Len: 1,358 bp
Hits: 20
E-val: 2.00E-11
Sim: 65.35%
|
XP_018973078.1 fibroblast growth factor 12-like |
Other
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SRR953582_primary_scf7180002256860_1-1124
Len: 1,123 bp
Hits: 20
E-val: 2.00E-33
Sim: 51.99%
|
XP_026104912.1DNA (cytosine-5)-methyltransferase 3A-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0051718F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002256910_1-990
Len: 989 bp
Hits: 20
E-val: 3.00E-46
Sim: 99.51%
|
XP_026131265.1sodium/calcium exchanger 1-like isoform X5 |
GO:0007154P:cell communication GO:0035725P:sodium ion transmembrane transport GO:0098703P:calcium ion import across plasma membrane GO:0005432F:calcium:sodium antiporter activity GO:0005516F:calmodulin binding GO:0046872F:metal ion binding GO:0012505C:endomembrane system GO:0030424C:axon GO:0042383C:sarcolemma GO:0098794C:postsynapse |
Membrane Transport
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SRR953582_primary_scf7180002257582_1-1450
Len: 1,449 bp
Hits: 20
E-val: 1.80E-31
Sim: 69.39%
|
XP_018930256.1 sorting nexin-16-like isoform X1 |
GO:0001881P:receptor recycling GO:0006622P:protein targeting to lysosome GO:0008333P:endosome to lysosome transport GO:0045022P:early endosome to late endosome transport GO:0035091F:phosphatidylinositol binding GO:0042802F:identical protein binding GO:0005764C:lysosome GO:0031901C:early endosome membrane GO:0031902C:late endosome membrane |
Cell Signaling
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SRR953582_primary_scf7180002257634_438-968
Len: 530 bp
Hits: 20
E-val: 3.60E-94
Sim: 98.56%
|
XP_018957415.1 cytoplasmic tRNA 2-thiolation protein 1 isoform X1 |
GO:0002143P:tRNA wobble position uridine thiolation GO:0032447P:protein urmylation GO:0000049F:tRNA binding GO:0005524F:ATP binding GO:0016779F:nucleotidyltransferase activity GO:0002144C:cytosolic tRNA wobble base thiouridylase complex GO:0005739C:mitochondrion |
Other
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SRR953582_primary_scf7180002257750_756-1043
Len: 287 bp
Hits: 20
E-val: 2.70E-48
Sim: 97.37%
|
XP_018953139.1 rhodopsin kinase |
GO:0006355P:regulation of DNA-templated transcription GO:0007601P:visual perception GO:0022400P:regulation of opsin-mediated signaling pathway GO:1902600P:proton transmembrane transport GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0015297F:antiporter activity GO:0050254F:rhodopsin kinase activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002258148_1-1062
Len: 1,061 bp
Hits: 20
E-val: 8.40E-26
Sim: 97.05%
|
KPP78747.1glutamate receptor ionotropic, kainate 2-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0034220P:monoatomic ion transmembrane transport GO:0004930F:G protein-coupled receptor activity GO:0015276F:ligand-gated monoatomic ion channel activity GO:0045211C:postsynaptic membrane |
Cell Signaling
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SRR953582_primary_scf7180002258918_1-1098
Len: 1,097 bp
Hits: 20
E-val: 1.30E-34
Sim: 92.58%
|
XP_026064465.1tetratricopeptide repeat protein 25 isoform X2 |
GO:0003341P:cilium movement GO:0032474P:otolith morphogenesis GO:0036158P:outer dynein arm assembly GO:0061371P:determination of heart left/right asymmetry GO:0004113F:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0042995C:cell projection |
Other
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SRR953582_primary_scf7180002259144_1-694
Len: 693 bp
Hits: 20
E-val: 2.00E-12
Sim: 69.1%
|
ROI64818.1Dedicator of cytokinesis protein 5 |
GO:0007520P:myoblast fusion GO:0016477P:cell migration GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002259498_220-942
Len: 722 bp
Hits: 20
E-val: 2.60E-95
Sim: 67.52%
|
XP_018931124.1 putative gonadotropin-releasing hormone II receptor |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0032870P:cellular response to hormone stimulus GO:0004968F:gonadotropin-releasing hormone receptor activity GO:0042277F:peptide binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002259753_1-1102
Len: 1,101 bp
Hits: 20
E-val: 8.70E-26
Sim: 100%
|
XP_018982107.1 calcium-dependent secretion activator 2-like |
GO:0015031P:protein transport GO:0016079P:synaptic vesicle exocytosis GO:0045921P:positive regulation of exocytosis GO:1990504P:dense core granule exocytosis GO:0008289F:lipid binding GO:0030659C:cytoplasmic vesicle membrane GO:0098793C:presynapse GO:0098978C:glutamatergic synapse |
Other
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