Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002268115_180-962
Len: 782 bp
Hits: 20
E-val: 6.20E-18
Sim: 95.82%
|
XP_026068816.1LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like |
GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0042393F:histone binding GO:0061749F:forked DNA-dependent helicase activity GO:0140658F:ATP-dependent chromatin remodeler activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
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SRR953582_primary_scf7180002268125_1-763
Len: 762 bp
Hits: 20
E-val: 1.10E-48
Sim: 85.25%
|
XP_026102047.1protein kinase C-binding protein 1-like isoform X4 |
GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR953582_primary_scf7180002268220_527-994
Len: 467 bp
Hits: 20
E-val: 3.40E-32
Sim: 64.95%
|
XP_026062313.1serine/threonine-protein kinase N2-like |
GO:0007507P:heart development GO:0035556P:intracellular signal transduction GO:0048703P:embryonic viscerocranium morphogenesis GO:0004674F:protein serine/threonine kinase activity GO:0005488F:binding GO:0110165C:cellular anatomical structure |
Signal Transduction
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SRR953582_primary_scf7180002268837_1-986
Len: 985 bp
Hits: 20
E-val: 2.50E-24
Sim: 95.36%
|
ROL48623.1Serine/threonine-protein kinase BRSK1 |
GO:0007399P:nervous system development GO:0035556P:intracellular signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002268927_1-1221
Len: 1,220 bp
Hits: 20
E-val: 4.20E-21
Sim: 95.25%
|
XP_016422796.1 tyrosine-protein kinase yes-like |
GO:0034334P:adherens junction maintenance GO:0060027P:convergent extension involved in gastrulation GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002269513_1-876
Len: 875 bp
Hits: 20
E-val: 6.20E-27
Sim: 97.58%
|
XP_018960688.1 LOW QUALITY PROTEIN: epidermal growth factor receptor substrate 15-like |
GO:0006457P:protein folding GO:0006897P:endocytosis GO:0016197P:endosomal transport GO:0005509F:calcium ion binding GO:0045296F:cadherin binding GO:0051082F:unfolded protein binding GO:0005783C:endoplasmic reticulum GO:0030132C:clathrin coat of coated pit |
Stress Response
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SRR953582_primary_scf7180002269827_1-743
Len: 742 bp
Hits: 20
E-val: 1.80E-96
Sim: 88.37%
|
XP_018972697.1 GRB2-associated-binding protein 2 |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0005068F:transmembrane receptor protein tyrosine kinase adaptor activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR953582_primary_scf7180002270763_1-1035
Len: 1,034 bp
Hits: 20
E-val: 1.40E-17
Sim: 96.23%
|
XP_016093396.1 protocadherin Fat 3-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
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SRR953582_primary_scf7180002271871_1-738
Len: 737 bp
Hits: 20
E-val: 8.70E-22
Sim: 98.13%
|
XP_026096338.1TNF receptor-associated factor 2-like |
GO:0033209P:tumor necrosis factor-mediated signaling pathway GO:0042981P:regulation of apoptotic process GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0004842F:ubiquitin-protein transferase activity GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0035591F:signaling adaptor activity GO:0005829C:cytosol GO:0009898C:cytoplasmic side of plasma membrane GO:1990604C:IRE1-TRAF2-ASK1 complex |
Cell Signaling
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SRR953582_primary_scf7180002272631_112-532
Len: 420 bp
Hits: 20
E-val: 8.80E-19
Sim: 96.33%
|
XP_016313312.1 LETM1 and EF-hand domain-containing protein 1, mitochondrial isoform X1 |
GO:0006813P:potassium ion transport GO:0006816P:calcium ion transport GO:0030003P:intracellular monoatomic cation homeostasis GO:0055085P:transmembrane transport GO:0005509F:calcium ion binding GO:0015297F:antiporter activity GO:0043022F:ribosome binding GO:0005743C:mitochondrial inner membrane |
Ion Transport
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SRR953582_primary_scf7180002273348_1-1175
Len: 1,174 bp
Hits: 20
E-val: 2.70E-17
Sim: 89.39%
|
XP_018947972.1 ras and Rab interactor 3-like |
GO:0007218P:neuropeptide signaling pathway GO:0016192P:vesicle-mediated transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0031267F:small GTPase binding GO:0005576C:extracellular region GO:0005829C:cytosol GO:0030139C:endocytic vesicle |
Cell Signaling
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SRR953582_primary_scf7180002273409_444-1233
Len: 789 bp
Hits: 20
E-val: 2.00E-24
Sim: 96.27%
|
XP_016097415.1 phospholipid phosphatase 2-like isoform X1 |
GO:0006644P:phospholipid metabolic process GO:0007165P:signal transduction GO:0046839P:phospholipid dephosphorylation GO:0008195F:phosphatidate phosphatase activity GO:0005886C:plasma membrane |
Metabolism
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SRR953582_primary_scf7180002274539_1-952
Len: 951 bp
Hits: 20
E-val: 1.20E-68
Sim: 95.74%
|
XP_018968374.1 potassium channel subfamily K member 1-like |
GO:0003015P:heart process GO:0007155P:cell adhesion GO:0016525P:negative regulation of angiogenesis GO:0030322P:stabilization of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0005576C:extracellular region GO:0016324C:apical plasma membrane GO:0030425C:dendrite GO:0043204C:perikaryon GO:0055037C:recycling endosome GO:0097060C:synaptic membrane |
Ion Transport
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SRR953582_primary_scf7180002275877_678-1119
Len: 441 bp
Hits: 20
E-val: 8.30E-28
Sim: 96.89%
|
XP_026110009.1cytosolic carboxypeptidase 4-like |
GO:0006508P:proteolysis GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0015631F:tubulin binding GO:0005829C:cytosol GO:0015630C:microtubule cytoskeleton |
Protein Degradation
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SRR953582_primary_scf7180002276203_89-727
Len: 638 bp
Hits: 20
E-val: 2.30E-63
Sim: 70%
|
XP_018928976.1 interferon-induced GTP-binding protein Mx3-like |
Other
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SRR953582_primary_scf7180002276437_1-697
Len: 696 bp
Hits: 20
E-val: 6.70E-16
Sim: 95.17%
|
ROK15787.1WASH complex subunit 2 |
GO:0036010P:protein localization to endosome GO:0042147P:retrograde transport, endosome to Golgi GO:1901981F:phosphatidylinositol phosphate binding GO:1905394F:retromer complex binding GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0031901C:early endosome membrane GO:0071203C:WASH complex |
Other
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SRR953582_primary_scf7180002279606_623-859
Len: 236 bp
Hits: 20
E-val: 7.10E-18
Sim: 76.85%
|
XP_018973134.1 low-density lipoprotein receptor-related protein 2-like |
GO:0006897P:endocytosis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002280681_326-1075
Len: 749 bp
Hits: 20
E-val: 4.70E-124
Sim: 85.63%
|
XP_018934692.1 LOW QUALITY PROTEIN: protocadherin Fat 1-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0031175P:neuron projection development GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0016342C:catenin complex |
Other
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SRR953582_primary_scf7180002281581_333-887
Len: 554 bp
Hits: 20
E-val: 1.60E-100
Sim: 86.32%
|
XP_018934845.1 butyrophilin subfamily 1 member A1-like isoform X1 |
GO:0001817P:regulation of cytokine production GO:0050852P:T cell receptor signaling pathway GO:0005102F:signaling receptor binding GO:0009897C:external side of plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002283179_1-939
Len: 938 bp
Hits: 20
E-val: 2.70E-28
Sim: 95.29%
|
XP_026105691.1BRISC complex subunit Abraxas 2-like isoform X3 |
GO:0008608P:attachment of spindle microtubules to kinetochore GO:0051301P:cell division GO:0070536P:protein K63-linked deubiquitination GO:0090307P:mitotic spindle assembly GO:0008017F:microtubule binding GO:0031593F:polyubiquitin modification-dependent protein binding GO:0000922C:spindle pole GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005874C:microtubule |
Other
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SRR953582_primary_scf7180002284479_199-857
Len: 658 bp
Hits: 20
E-val: 9.20E-15
Sim: 81.88%
|
XP_026072677.1probable pancreatic secretory proteinase inhibitor |
GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005576C:extracellular region |
Protein Degradation
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SRR953582_primary_scf7180002284720_1-683
Len: 682 bp
Hits: 20
E-val: 3.70E-35
Sim: 96.71%
|
XP_018943120.1 V-type proton ATPase subunit B, brain isoform-like |
GO:0007035P:vacuolar acidification GO:0046034P:ATP metabolic process GO:1902600P:proton transmembrane transport GO:0005524F:ATP binding GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0016324C:apical plasma membrane GO:0030665C:clathrin-coated vesicle membrane GO:0030672C:synaptic vesicle membrane GO:0033180C:proton-transporting V-type ATPase, V1 domain GO:0042470C:melanosome |
Membrane Transport
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SRR953582_primary_scf7180002285426_1-620
Len: 619 bp
Hits: 20
E-val: 1.50E-35
Sim: 71.37%
|
XP_026105860.1cGMP-dependent protein kinase 2-like |
GO:0007165P:signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0032555F:purine ribonucleotide binding GO:0043168F:anion binding |
Signal Transduction
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SRR953582_primary_scf7180002285509_1-1071
Len: 1,070 bp
Hits: 20
E-val: 1.20E-08
Sim: 100%
|
XP_026059550.1lipopolysaccharide-responsive and beige-like anchor protein isoform X3 |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002285803_51-753
Len: 702 bp
Hits: 20
E-val: 7.30E-26
Sim: 58.36%
|
XP_018948192.1 presenilins-associated rhomboid-like protein, mitochondrial |
GO:0006465P:signal peptide processing GO:0004252F:serine-type endopeptidase activity GO:0016787F:hydrolase activity GO:0005923C:bicellular tight junction GO:0016020C:membrane |
Protein Degradation
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