Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR953582_primary_scf7180002445640_825-1499
Len: 674 bp
Hits: 20
E-val: 1.20E-123
Sim: 98.19%
|
XP_018934536.1 homeobox protein Hox-B13a-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR953582_primary_scf7180002445725_1-1688
Len: 1,687 bp
Hits: 20
E-val: 3.50E-26
Sim: 99.17%
|
XP_026112959.1gamma-aminobutyric acid type B receptor subunit 2-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007214P:gamma-aminobutyric acid signaling pathway GO:0004965F:G protein-coupled GABA receptor activity GO:0038039C:G protein-coupled receptor heterodimeric complex |
Cell Signaling
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SRR953582_primary_scf7180002445766_205-1577
Len: 1,372 bp
Hits: 20
E-val: 2.30E-28
Sim: 87.76%
|
XP_018948736.1 LOW QUALITY PROTEIN: origin recognition complex subunit 5 |
GO:0006270P:DNA replication initiation GO:0003688F:DNA replication origin binding GO:0005664C:nuclear origin of replication recognition complex |
DNA Metabolism
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SRR953582_primary_scf7180002445783_1-1396
Len: 1,395 bp
Hits: 20
E-val: 1.50E-30
Sim: 95.93%
|
XP_018943026.1 glypican-1-like, partial |
GO:0016477P:cell migration GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:1905475P:regulation of protein localization to membrane GO:0017134F:fibroblast growth factor binding GO:0005576C:extracellular region GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0045202C:synapse GO:0098552C:side of membrane |
Cell Signaling
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SRR953582_primary_scf7180002445799_1-1056
Len: 1,055 bp
Hits: 20
E-val: 1.90E-30
Sim: 94.42%
|
XP_018970535.1 signal recognition particle receptor subunit beta |
GO:0045047P:protein targeting to ER GO:0005525F:GTP binding GO:0005785C:signal recognition particle receptor complex |
Cell Signaling
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SRR953582_primary_scf7180002445816_310-1472
Len: 1,162 bp
Hits: 20
E-val: 5.10E-16
Sim: 96.03%
|
AAH83414.1Transmembrane BAX inhibitor motif containing 1 |
GO:0043524P:negative regulation of neuron apoptotic process GO:0070588P:calcium ion transmembrane transport GO:1902042P:negative regulation of extrinsic apoptotic signaling pathway via death domain receptors GO:0005262F:calcium channel activity GO:0005783C:endoplasmic reticulum GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Cell Signaling
|
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SRR953582_primary_scf7180002446021_501-1503
Len: 1,002 bp
Hits: 20
E-val: 6.50E-28
Sim: 92.59%
|
XP_018982041.1 DNA-directed RNA polymerase II subunit GRINL1A-like |
GO:0006368P:transcription elongation by RNA polymerase II GO:0035556P:intracellular signal transduction GO:0003711F:transcription elongation factor activity GO:0005665C:RNA polymerase II, core complex GO:0031674C:I band |
Transcription Regulation
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SRR953582_primary_scf7180002446046_1-401
Len: 400 bp
Hits: 20
E-val: 6.00E-25
Sim: 90.18%
|
XP_018924592.1 keratin, type I cytoskeletal 20-like |
GO:0005198F:structural molecule activity GO:0005882C:intermediate filament |
Other
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SRR953582_primary_scf7180002446107_1-1319
Len: 1,318 bp
Hits: 20
E-val: 2.30E-17
Sim: 95.42%
|
XP_018927647.1 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like |
GO:0007165P:signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0005911C:cell-cell junction GO:0016020C:membrane |
Signal Transduction
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SRR953582_primary_scf7180002446141_398-1560
Len: 1,162 bp
Hits: 20
E-val: 2.80E-38
Sim: 96.75%
|
XP_026064745.1NHP2-like protein 1 |
GO:0000398P:mRNA splicing, via spliceosome GO:0042254P:ribosome biogenesis GO:0003723F:RNA binding GO:0005730C:nucleolus GO:1990904C:ribonucleoprotein complex |
Other
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SRR953582_primary_scf7180002446187_1-897
Len: 896 bp
Hits: 20
E-val: 4.10E-34
Sim: 70.52%
|
XP_016299491.1 glyoxylate reductase/hydroxypyruvate reductase-like |
GO:0008465F:hydroxypyruvate reductase (NADH) activity GO:0030267F:glyoxylate reductase (NADPH) activity GO:0005829C:cytosol |
Other
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SRR953582_primary_scf7180002446409_1-1267
Len: 1,266 bp
Hits: 20
E-val: 7.40E-13
Sim: 91.9%
|
CAF90346.1unnamed protein product |
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0042472P:inner ear morphogenesis GO:0048798P:swim bladder inflation GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0072488P:ammonium transmembrane transport GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0008519F:ammonium channel activity GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Ion Transport
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SRR953582_primary_scf7180002446434_180-1081
Len: 901 bp
Hits: 20
E-val: 1.50E-108
Sim: 88.62%
|
XP_018922131.1 monocarboxylate transporter 3-like |
GO:0015718P:monocarboxylic acid transport GO:0032956P:regulation of actin cytoskeleton organization GO:0035020P:regulation of Rac protein signal transduction GO:0055085P:transmembrane transport GO:0005096F:GTPase activator activity GO:0008028F:monocarboxylic acid transmembrane transporter activity GO:0015293F:symporter activity GO:0005829C:cytosol GO:0016323C:basolateral plasma membrane |
Membrane Transport
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SRR953582_primary_scf7180002446436_436-999
Len: 563 bp
Hits: 20
E-val: 1.70E-102
Sim: 97.64%
|
XP_018943153.1 EH domain-containing protein 4-like isoform X1 |
GO:0006897P:endocytosis GO:0016197P:endosomal transport GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0005886C:plasma membrane GO:0055038C:recycling endosome membrane |
Other
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SRR953582_primary_scf7180002446627_1-1344
Len: 1,343 bp
Hits: 20
E-val: 2.00E-16
Sim: 95.16%
|
XP_018977202.1 cysteine-rich motor neuron 1 protein |
GO:0001568P:blood vessel development GO:0001756P:somitogenesis GO:0048570P:notochord morphogenesis GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Protein Degradation
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SRR953582_primary_scf7180002446940_1-1367
Len: 1,366 bp
Hits: 20
E-val: 5.70E-19
Sim: 91.38%
|
XP_018944012.1 myotubularin-related protein 3-like |
GO:0006338P:chromatin remodeling GO:0010506P:regulation of autophagy GO:0046856P:phosphatidylinositol dephosphorylation GO:0004438F:phosphatidylinositol-3-phosphate phosphatase activity GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008270F:zinc ion binding GO:0019903F:protein phosphatase binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0052629F:phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
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SRR953582_primary_scf7180002446988_1-916
Len: 915 bp
Hits: 20
E-val: 2.20E-54
Sim: 82.78%
|
XP_018924875.1 growth hormone secretagogue receptor type 1-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0008528F:G protein-coupled peptide receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002447116_1-1333
Len: 1,332 bp
Hits: 20
E-val: 4.60E-13
Sim: 99.75%
|
XP_026053486.1bridging integrator 3 isoform X3 |
GO:0006897P:endocytosis GO:0051666P:actin cortical patch localization GO:0097320P:plasma membrane tubulation GO:0008289F:lipid binding GO:0005737C:cytoplasm GO:0015629C:actin cytoskeleton |
Other
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SRR953582_primary_scf7180002447229_1-1314
Len: 1,313 bp
Hits: 20
E-val: 9.70E-16
Sim: 99.38%
|
XP_022532950.1plexin-A2 |
GO:0003403P:optic vesicle formation GO:0007411P:axon guidance GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
Cell Signaling
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SRR953582_primary_scf7180002447391_1-1285
Len: 1,284 bp
Hits: 20
E-val: 1.70E-20
Sim: 96.95%
|
XP_016138431.1 trifunctional enzyme subunit beta, mitochondrial-like |
GO:0006635P:fatty acid beta-oxidation GO:0003985F:acetyl-CoA C-acetyltransferase activity GO:0016507C:mitochondrial fatty acid beta-oxidation multienzyme complex |
Other
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SRR953582_primary_scf7180002447462_1-1037
Len: 1,036 bp
Hits: 20
E-val: 3.80E-23
Sim: 57.31%
|
XP_018928462.1 FK506-binding protein 15-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0030426C:growth cone |
Transcription Regulation
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SRR953582_primary_scf7180002447657_1-622
Len: 621 bp
Hits: 20
E-val: 6.80E-60
Sim: 95.97%
|
XP_018922543.1 LOW QUALITY PROTEIN: fibulin-2-like |
GO:0005509F:calcium ion binding GO:0005576C:extracellular region |
Other
|
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SRR953582_primary_scf7180002447665_1-1212
Len: 1,211 bp
Hits: 20
E-val: 3.60E-49
Sim: 72.05%
|
XP_026088031.1chromodomain-helicase-DNA-binding protein 4-like isoform X1 |
GO:0003678F:DNA helicase activity GO:0016787F:hydrolase activity GO:0043167F:ion binding GO:0000785C:chromatin GO:0005634C:nucleus |
DNA Metabolism
|
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SRR953582_primary_scf7180002447672_57-687
Len: 630 bp
Hits: 20
E-val: 6.70E-23
Sim: 88.68%
|
XP_016122087.1 talin-1-like, partial |
GO:0030036P:actin cytoskeleton organization GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0005200F:structural constituent of cytoskeleton GO:0051015F:actin filament binding GO:0001726C:ruffle GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005925C:focal adhesion |
Other
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SRR953582_primary_scf7180002447678_1-1238
Len: 1,237 bp
Hits: 20
E-val: 1.10E-37
Sim: 97.8%
|
NP_001017754.1cytosolic carboxypeptidase 6 |
GO:0006508P:proteolysis GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0004181F:metallocarboxypeptidase activity GO:0008270F:zinc ion binding GO:0005829C:cytosol |
Transcription Regulation
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