Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924330_primary_scf7180002824228_1-1070
Len: 1,069 bp
Hits: 20
E-val: 8.50E-18
Sim: 90.54%
|
XP_016109130.1 tubulin beta chain-like |
GO:0000226P:microtubule cytoskeleton organization GO:0000278P:mitotic cell cycle GO:0001764P:neuron migration GO:1902669P:positive regulation of axon guidance GO:0003924F:GTPase activity GO:0005200F:structural constituent of cytoskeleton GO:0005525F:GTP binding GO:0046872F:metal ion binding GO:0046982F:protein heterodimerization activity GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0045171C:intercellular bridge GO:0072686C:mitotic spindle |
Other
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SRR924330_primary_scf7180002824495_435-1019
Len: 584 bp
Hits: 20
E-val: 1.10E-30
Sim: 96.16%
|
XP_018973281.1 alpha-2-macroglobulin-like protein 1 |
GO:0007399P:nervous system development GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space |
Protein Degradation
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SRR924330_primary_scf7180002824622_78-629
Len: 551 bp
Hits: 20
E-val: 5.50E-37
Sim: 91.5%
|
AII80534.1apolipoprotein A IV 1 |
GO:0008203P:cholesterol metabolic process GO:0033344P:cholesterol efflux GO:0033700P:phospholipid efflux GO:0042157P:lipoprotein metabolic process GO:0055090P:acylglycerol homeostasis GO:0005543F:phospholipid binding GO:0060228F:phosphatidylcholine-sterol O-acyltransferase activator activity GO:0120020F:cholesterol transfer activity GO:0034361C:very-low-density lipoprotein particle GO:0034362C:low-density lipoprotein particle GO:0034364C:high-density lipoprotein particle GO:0042627C:chylomicron GO:1903561C:extracellular vesicle |
Metabolism
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SRR924330_primary_scf7180002824633_1-304
Len: 303 bp
Hits: 20
E-val: 8.50E-24
Sim: 91.33%
|
XP_018921933.1 RING1 and YY1-binding protein A isoform X1 |
GO:0006915P:apoptotic process GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924330_primary_scf7180002824786_1-1190
Len: 1,189 bp
Hits: 20
E-val: 1.10E-63
Sim: 54.51%
|
XP_018977028.1 LOW QUALITY PROTEIN: polycystin-1-like |
GO:0001889P:liver development GO:0001946P:lymphangiogenesis GO:0032965P:regulation of collagen biosynthetic process GO:0048793P:pronephros development |
Other
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SRR924330_primary_scf7180002824965_531-1472
Len: 941 bp
Hits: 20
E-val: 1.30E-22
Sim: 98.53%
|
XP_016325964.1 transcription initiation factor TFIID subunit 3-like |
GO:0006413P:translational initiation GO:0030097P:hemopoiesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048634P:regulation of muscle organ development GO:0000976F:transcription cis-regulatory region binding GO:0002039F:p53 binding GO:0003743F:translation initiation factor activity GO:0008270F:zinc ion binding GO:0046982F:protein heterodimerization activity GO:0005669C:transcription factor TFIID complex |
Transcription Regulation
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SRR924330_primary_scf7180002825087_1-1293
Len: 1,292 bp
Hits: 20
E-val: 8.50E-65
Sim: 60.22%
|
XP_018968800.1 LOW QUALITY PROTEIN: integrator complex subunit 2-like |
GO:0016180P:snRNA processing GO:0034472P:snRNA 3'-end processing GO:0003674F:molecular_function GO:0005634C:nucleus GO:0032039C:integrator complex |
Other
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SRR924330_primary_scf7180002825095_1-992
Len: 991 bp
Hits: 20
E-val: 2.30E-49
Sim: 89.77%
|
XP_016334098.1 sialic acid synthase-like, partial |
GO:0016051P:carbohydrate biosynthetic process GO:0047444F:N-acylneuraminate-9-phosphate synthase activity GO:0005576C:extracellular region |
Other
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SRR924330_primary_scf7180002825207_356-1168
Len: 812 bp
Hits: 20
E-val: 1.00E-148
Sim: 91.34%
|
XP_018962442.1 exosome complex component MTR3 |
GO:0006364P:rRNA processing GO:0016075P:rRNA catabolic process GO:0034475P:U4 snRNA 3'-end processing GO:0071028P:nuclear mRNA surveillance GO:0071051P:poly(A)-dependent snoRNA 3'-end processing GO:0003723F:RNA binding GO:0000176C:nuclear exosome (RNase complex) GO:0000177C:cytoplasmic exosome (RNase complex) GO:0005730C:nucleolus |
Other
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SRR924330_primary_scf7180002825768_311-904
Len: 593 bp
Hits: 20
E-val: 1.30E-100
Sim: 92.01%
|
CAA74974.1D4A Dopamine receptor |
GO:0001963P:synaptic transmission, dopaminergic GO:0007195P:adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:0014059P:regulation of dopamine secretion GO:0021514P:ventral spinal cord interneuron differentiation GO:0021520P:spinal cord motor neuron cell fate specification GO:0043266P:regulation of potassium ion transport GO:0051481P:negative regulation of cytosolic calcium ion concentration GO:0051967P:negative regulation of synaptic transmission, glutamatergic GO:0060158P:phospholipase C-activating dopamine receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0001591F:dopamine neurotransmitter receptor activity, coupled via Gi/Go GO:0004938F:alpha2-adrenergic receptor activity GO:0005886C:plasma membrane GO:0045202C:synapse |
Cell Signaling
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SRR924330_primary_scf7180002831620_1-818
Len: 817 bp
Hits: 20
E-val: 4.30E-147
Sim: 83.77%
|
XP_018946301.1 protein sprouty homolog 2-like |
GO:0001525P:angiogenesis GO:0009953P:dorsal/ventral pattern formation GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0046580P:negative regulation of Ras protein signal transduction GO:0048513P:animal organ development GO:0060841P:venous blood vessel development GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:0005829C:cytosol GO:0016020C:membrane |
Cell Signaling
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SRR924330_primary_scf7180002831628_1-1933
Len: 1,932 bp
Hits: 20
E-val: 1.20E-17
Sim: 94.98%
|
XP_026132340.1RNA binding protein fox-1 homolog 3-like isoform X4 |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0007399P:nervous system development GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR924330_primary_scf7180002831654_1-157
Len: 156 bp
Hits: 20
E-val: 2.30E-20
Sim: 98.17%
|
XP_026060959.1adenylate cyclase type 8-like isoform X2 |
GO:0006171P:cAMP biosynthetic process GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0035556P:intracellular signal transduction GO:0004016F:adenylate cyclase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924330_primary_scf7180002831691_5-1097
Len: 1,092 bp
Hits: 20
E-val: 3.70E-101
Sim: 78.23%
|
XP_026111686.1glutamate receptor 2-like isoform X7 |
GO:0006811P:monoatomic ion transport GO:0007399P:nervous system development GO:0014032P:neural crest cell development GO:0035249P:synaptic transmission, glutamatergic GO:0048701P:embryonic cranial skeleton morphogenesis GO:0048899P:anterior lateral line development GO:0048915P:posterior lateral line system development GO:0050804P:modulation of chemical synaptic transmission GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR924330_primary_scf7180002831819_1-801
Len: 800 bp
Hits: 20
E-val: 8.40E-87
Sim: 95.42%
|
XP_016373424.1 zinc finger protein 319-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Signal Transduction
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SRR924330_primary_scf7180002831879_1-1323
Len: 1,322 bp
Hits: 20
E-val: 9.60E-80
Sim: 96.38%
|
XP_016128708.1 Y+L amino acid transporter 2-like |
GO:0031349P:positive regulation of defense response GO:0042981P:regulation of apoptotic process GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:1902475P:L-alpha-amino acid transmembrane transport GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0015179F:L-amino acid transmembrane transporter activity GO:0005886C:plasma membrane |
Signal Transduction
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SRR924330_primary_scf7180002831880_1-1815
Len: 1,814 bp
Hits: 20
E-val: 2.40E-121
Sim: 83.51%
|
XP_018937122.1 lipolysis-stimulated lipoprotein receptor-like isoform X2 |
GO:0007492P:endoderm development GO:0031016P:pancreas development GO:0060856P:establishment of blood-brain barrier GO:1904274P:tricellular tight junction assembly GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction GO:0012505C:endomembrane system GO:0061689C:tricellular tight junction |
Other
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SRR924330_primary_scf7180002831992_1-524
Len: 523 bp
Hits: 20
E-val: 5.90E-41
Sim: 90.51%
|
XP_026126546.1obscurin-like |
GO:0007517P:muscle organ development GO:0098609P:cell-cell adhesion GO:0004672F:protein kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0030018C:Z disc |
Signal Transduction
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SRR924330_primary_scf7180002832020_1-566
Len: 565 bp
Hits: 20
E-val: 4.80E-12
Sim: 78.23%
|
XP_020333051.1rho GTPase-activating protein 42-like, partial |
GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
Other
|
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SRR924330_primary_scf7180002832040_202-1515
Len: 1,313 bp
Hits: 20
E-val: 3.00E-174
Sim: 95.65%
|
XP_018930201.1 zinc finger and BTB domain-containing protein 14-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
Transcription Regulation
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SRR924330_primary_scf7180002832049_1-844
Len: 843 bp
Hits: 20
E-val: 3.90E-18
Sim: 96.89%
|
XP_016135400.1 parkin coregulated gene protein homolog isoform X1 |
GO:0007368P:determination of left/right symmetry GO:0008092F:cytoskeletal protein binding GO:0030544F:Hsp70 protein binding GO:0051879F:Hsp90 protein binding GO:0005829C:cytosol GO:0005929C:cilium GO:0015630C:microtubule cytoskeleton GO:0031982C:vesicle GO:0043005C:neuron projection |
Other
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SRR924330_primary_scf7180002832148_166-711
Len: 545 bp
Hits: 20
E-val: 2.80E-94
Sim: 94.82%
|
XP_016408494.1 pleckstrin homology-like domain family A member 2 isoform X1 |
GO:0043065P:positive regulation of apoptotic process GO:1901981F:phosphatidylinositol phosphate binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR924330_primary_scf7180002832198_1-912
Len: 911 bp
Hits: 20
E-val: 7.10E-50
Sim: 76.96%
|
ROL51806.1RING finger protein 145 |
GO:0036503P:ERAD pathway GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0012505C:endomembrane system GO:0016020C:membrane |
DNA Metabolism
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SRR924330_primary_scf7180002832199_1-987
Len: 986 bp
Hits: 20
E-val: 3.70E-153
Sim: 89.5%
|
XP_018969623.1 LOW QUALITY PROTEIN: transforming acidic coiled-coil-containing protein 3-like |
GO:0007052P:mitotic spindle organization GO:0007097P:nuclear migration GO:0021987P:cerebral cortex development GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
Other
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SRR924330_primary_scf7180002832228_1-1090
Len: 1,089 bp
Hits: 20
E-val: 6.60E-34
Sim: 66.66%
|
XP_016419922.1 E3 ubiquitin-protein ligase RBBP6-like, partial |
GO:0006397P:mRNA processing GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus |
DNA Metabolism
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