Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924330_primary_scf7180002832264_214-1402
Len: 1,188 bp
Hits: 20
E-val: 5.90E-36
Sim: 66.41%
|
XP_016133459.1 replication factor C subunit 3-like, partial |
GO:0006260P:DNA replication GO:0003824F:catalytic activity GO:0140657F:ATP-dependent activity GO:0043229C:intracellular organelle |
DNA Metabolism
|
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SRR924330_primary_scf7180002832574_1-1061
Len: 1,060 bp
Hits: 20
E-val: 3.00E-31
Sim: 99.15%
|
XP_026068582.1probable ubiquitin carboxyl-terminal hydrolase FAF-X |
GO:0006508P:proteolysis GO:0016477P:cell migration GO:0016579P:protein deubiquitination GO:0031647P:regulation of protein stability GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Protein Degradation
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SRR924330_primary_scf7180002832725_529-1262
Len: 733 bp
Hits: 20
E-val: 3.70E-73
Sim: 90.96%
|
XP_018966394.1 caspase-8-like |
GO:0006508P:proteolysis GO:0007229P:integrin-mediated signaling pathway GO:0043525P:positive regulation of neuron apoptotic process GO:0051604P:protein maturation GO:0003723F:RNA binding GO:0004197F:cysteine-type endopeptidase activity GO:0004222F:metalloendopeptidase activity GO:0005737C:cytoplasm GO:0031265C:CD95 death-inducing signaling complex GO:0042734C:presynaptic membrane |
Cell Signaling
|
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SRR924330_primary_scf7180002832828_174-817
Len: 643 bp
Hits: 20
E-val: 9.30E-28
Sim: 70.8%
|
NP_001070811.1ubiquitin carboxyl-terminal hydrolase 37 |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0021551P:central nervous system morphogenesis GO:0031647P:regulation of protein stability GO:0035871P:protein K11-linked deubiquitination GO:0071108P:protein K48-linked deubiquitination GO:1904888P:cranial skeletal system development GO:0004197F:cysteine-type endopeptidase activity GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Protein Degradation
|
|
SRR924330_primary_scf7180002833010_1-1033
Len: 1,032 bp
Hits: 20
E-val: 5.80E-141
Sim: 83.09%
|
XP_016316063.1 armadillo repeat protein deleted in velo-cardio-facial syndrome-like |
GO:0048513P:animal organ development GO:0098609P:cell-cell adhesion GO:0045296F:cadherin binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005912C:adherens junction |
Other
|
|
SRR924330_primary_scf7180002833276_355-828
Len: 473 bp
Hits: 20
E-val: 1.50E-75
Sim: 90.81%
|
XP_026067988.1neurogenic locus notch homolog protein 1-like |
GO:0001525P:angiogenesis GO:0001946P:lymphangiogenesis GO:0006355P:regulation of DNA-templated transcription GO:0007157P:heterophilic cell-cell adhesion GO:0007219P:Notch signaling pathway GO:0007411P:axon guidance GO:0021514P:ventral spinal cord interneuron differentiation GO:0021654P:rhombomere boundary formation GO:0031101P:fin regeneration GO:0035907P:dorsal aorta development GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0048936P:peripheral nervous system neuron axonogenesis GO:0050793P:regulation of developmental process GO:0060218P:hematopoietic stem cell differentiation GO:0097150P:neuronal stem cell population maintenance GO:0005509F:calcium ion binding GO:0038023F:signaling receptor activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0043235C:receptor complex |
Cell Signaling
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SRR924330_primary_scf7180002833329_1-955
Len: 954 bp
Hits: 20
E-val: 1.80E-27
Sim: 93.33%
|
XP_016133662.1 kinesin-like protein KIF26B |
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005856C:cytoskeleton |
Other
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SRR924330_primary_scf7180002833901_1-821
Len: 820 bp
Hits: 10
E-val: 2.10E-16
Sim: 81.63%
|
XP_018926603.1 ankyrin-3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007165P:signal transduction GO:0061629F:RNA polymerase II-specific DNA-binding transcription factor binding GO:0005634C:nucleus GO:0005856C:cytoskeleton GO:0016020C:membrane |
Transcription Regulation
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SRR924330_primary_scf7180002833955_1-1071
Len: 1,070 bp
Hits: 20
E-val: 5.70E-22
Sim: 99.6%
|
XP_018974419.1 liprin-alpha-3-like |
Other
|
|
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SRR924330_primary_scf7180002834274_1-1308
Len: 1,307 bp
Hits: 20
E-val: 1.00E-28
Sim: 81.84%
|
XP_016118286.1 eukaryotic translation initiation factor 4E-binding protein 3-like |
GO:0014743P:regulation of muscle hypertrophy GO:0045947P:negative regulation of translational initiation GO:0003743F:translation initiation factor activity GO:0008190F:eukaryotic initiation factor 4E binding GO:0005737C:cytoplasm |
Other
|
|
SRR924330_primary_scf7180002834927_1-891
Len: 890 bp
Hits: 20
E-val: 1.50E-81
Sim: 92.48%
|
XP_018975158.1 tetratricopeptide repeat protein 22-like |
Other
|
|
|
SRR924330_primary_scf7180002835140_1-763
Len: 762 bp
Hits: 20
E-val: 1.10E-131
Sim: 86.9%
|
XP_016357548.1 semaphorin-4B-like |
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924330_primary_scf7180002835545_184-942
Len: 758 bp
Hits: 20
E-val: 3.30E-93
Sim: 81.53%
|
XP_018965385.1 UBX domain-containing protein 7-like, partial |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043130F:ubiquitin binding GO:0005634C:nucleus |
Other
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SRR924330_primary_scf7180002835840_1-1013
Len: 1,012 bp
Hits: 20
E-val: 4.00E-17
Sim: 90.62%
|
XP_016123183.1 KH domain-containing, RNA-binding, signal transduction-associated protein 2-like |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0003729F:mRNA binding GO:0008143F:poly(A) binding GO:0005634C:nucleus |
Other
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SRR924330_primary_scf7180002836107_248-1043
Len: 795 bp
Hits: 20
E-val: 4.80E-143
Sim: 93.47%
|
XP_018965251.1 sphingosine 1-phosphate receptor 3-like |
GO:0003376P:sphingosine-1-phosphate receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0019222P:regulation of metabolic process GO:0038036F:sphingosine-1-phosphate receptor activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR924330_primary_scf7180002836113_1-709
Len: 708 bp
Hits: 20
E-val: 1.80E-24
Sim: 93.79%
|
RXN34439.1putative phospholipid-transporting ATPase IIB isoform X1 |
GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006897P:endocytosis GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
Other
|
|
SRR924330_primary_scf7180002837959_1-777
Len: 776 bp
Hits: 20
E-val: 2.90E-15
Sim: 98.5%
|
RXN18393.1U5 small nuclear ribonucleo protein 200 kDa helicase |
GO:0000712P:resolution of meiotic recombination intermediates GO:0006397P:mRNA processing GO:0007399P:nervous system development GO:0003676F:nucleic acid binding GO:0003678F:DNA helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
DNA Metabolism
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|
SRR924330_primary_scf7180002837992_21-557
Len: 536 bp
Hits: 20
E-val: 2.30E-80
Sim: 88.92%
|
XP_018960682.1 magnesium transporter NIPA1 |
GO:0007411P:axon guidance GO:1903830P:magnesium ion transmembrane transport GO:0015095F:magnesium ion transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
|
|
SRR924330_primary_scf7180002838232_1-1047
Len: 1,046 bp
Hits: 20
E-val: 1.40E-52
Sim: 89.05%
|
XP_026077920.1rho GTPase-activating protein SYDE1-like |
GO:0016477P:cell migration GO:0046578P:regulation of Ras protein signal transduction GO:0005096F:GTPase activator activity GO:0097060C:synaptic membrane |
Other
|
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SRR924330_primary_scf7180002838312_1-978
Len: 977 bp
Hits: 20
E-val: 1.20E-23
Sim: 89.46%
|
CDQ95248.1unnamed protein product, partial |
GO:0001702P:gastrulation with mouth forming second GO:0005634C:nucleus |
Other
|
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SRR924330_primary_scf7180002838685_1-486
Len: 485 bp
Hits: 20
E-val: 2.20E-37
Sim: 90.71%
|
XP_016086171.1 interleukin-17 receptor B-like |
GO:0019221P:cytokine-mediated signaling pathway GO:0030368F:interleukin-17 receptor activity GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR924330_primary_scf7180002840278_196-1023
Len: 827 bp
Hits: 20
E-val: 7.20E-25
Sim: 98.33%
|
XP_016137063.1 protein SMG5-like |
GO:0000184P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0043009P:chordate embryonic development GO:0042162F:telomeric DNA binding GO:0070034F:telomerase RNA binding GO:0005697C:telomerase holoenzyme complex GO:0005737C:cytoplasm |
DNA Metabolism
|
|
SRR924330_primary_scf7180002842038_1-598
Len: 597 bp
Hits: 20
E-val: 2.60E-32
Sim: 68%
|
XP_016139148.1 uridine-cytidine kinase 2-B-like |
GO:0044238P:primary metabolic process GO:0016408F:C-acyltransferase activity |
Metabolism
|
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SRR924330_primary_scf7180002853738_1-1552
Len: 1,551 bp
Hits: 20
E-val: 4.50E-145
Sim: 97.17%
|
XP_016133707.1 RNA-binding protein Nova-1-like isoform X1 |
GO:0000381P:regulation of alternative mRNA splicing, via spliceosome GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
|
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SRR924330_primary_scf7180002853857_1-936
Len: 935 bp
Hits: 20
E-val: 1.10E-125
Sim: 84.28%
|
XP_016342835.1 CAP-Gly domain-containing linker protein 2-like |
GO:0031122P:cytoplasmic microtubule organization GO:0051010F:microtubule plus-end binding GO:0005634C:nucleus GO:0005938C:cell cortex GO:0035371C:microtubule plus-end |
Other
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