Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924330_primary_scf7180002853909_630-1083
Len: 453 bp
Hits: 20
E-val: 2.90E-84
Sim: 99.9%
|
XP_026089478.1homeobox protein SIX6-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008283P:cell population proliferation GO:0043010P:camera-type eye development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924330_primary_scf7180002854086_452-1447
Len: 995 bp
Hits: 20
E-val: 9.20E-160
Sim: 96.12%
|
XP_018939061.1 synaptotagmin-11-like isoform X1 |
GO:0006906P:vesicle fusion GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0005811C:lipid droplet GO:0005886C:plasma membrane GO:0030424C:axon GO:0070382C:exocytic vesicle GO:0098793C:presynapse |
Other
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SRR924330_primary_scf7180002854095_380-1359
Len: 979 bp
Hits: 20
E-val: 5.50E-24
Sim: 99.56%
|
XP_026065788.1sulfotransferase 4A1 isoform X2 |
Other
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SRR924330_primary_scf7180002854195_228-1514
Len: 1,286 bp
Hits: 20
E-val: 2.60E-231
Sim: 97.11%
|
XP_026058297.1hepatocyte growth factor receptor-like |
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030334P:regulation of cell migration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0070836P:caveola assembly GO:0071526P:semaphorin-plexin signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0017154F:semaphorin receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0000139C:Golgi membrane GO:0002116C:semaphorin receptor complex GO:0005901C:caveola |
Signal Transduction
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SRR924330_primary_scf7180002854309_1-645
Len: 644 bp
Hits: 20
E-val: 2.80E-40
Sim: 60.86%
|
XP_018935482.1 heterogeneous nuclear ribonucleoprotein L-like |
GO:0006397P:mRNA processing GO:0003676F:nucleic acid binding GO:0003723F:RNA binding GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
Other
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SRR924330_primary_scf7180002854430_1-665
Len: 664 bp
Hits: 20
E-val: 4.00E-26
Sim: 99.74%
|
RXN25572.1lipopolysaccharide-responsive and beige-like anchor isoform X1 |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR924330_primary_scf7180002854464_1-841
Len: 840 bp
Hits: 20
E-val: 1.20E-46
Sim: 96.04%
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XP_018980970.1 LOW QUALITY PROTEIN: rhodopsin kinase 1-like |
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0009966P:regulation of signal transduction GO:0036368P:cone photoresponse recovery GO:0005524F:ATP binding GO:0009881F:photoreceptor activity GO:0050254F:rhodopsin kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924330_primary_scf7180002854614_1-1007
Len: 1,006 bp
Hits: 20
E-val: 5.60E-88
Sim: 96.64%
|
XP_018951391.1 F-box/WD repeat-containing protein 2-like isoform X1 |
GO:0003674F:molecular_function GO:0005575C:cellular_component |
Other
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SRR924330_primary_scf7180002854655_81-440
Len: 359 bp
Hits: 20
E-val: 2.50E-59
Sim: 96.86%
|
XP_018978760.1 transmembrane protein 5 |
GO:0035269P:protein O-linked glycosylation via mannose GO:0120053F:ribitol beta-1,4-xylosyltransferase activity GO:0000139C:Golgi membrane |
Other
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SRR924330_primary_scf7180002855172_311-682
Len: 371 bp
Hits: 20
E-val: 1.10E-36
Sim: 87.66%
|
XP_008318745.1myosin-7 isoform X2 |
GO:0007512P:adult heart development GO:0030049P:muscle filament sliding GO:0045214P:sarcomere organization GO:0060048P:cardiac muscle contraction GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0016460C:myosin II complex GO:0030017C:sarcomere GO:0032982C:myosin filament |
Other
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SRR924330_primary_scf7180002855802_1-1106
Len: 1,105 bp
Hits: 20
E-val: 2.00E-30
Sim: 97.84%
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RXN29743.1tyrosine sulfotransferase 1 isoform X1 |
GO:0008476F:protein-tyrosine sulfotransferase activity GO:0005794C:Golgi apparatus |
Other
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SRR924330_primary_scf7180002855976_1-852
Len: 851 bp
Hits: 20
E-val: 2.10E-64
Sim: 76.9%
|
XP_016139609.1 ATPase family AAA domain-containing protein 1-B-like |
GO:0140570P:extraction of mislocalized protein from mitochondrial outer membrane GO:0140657F:ATP-dependent activity GO:0005741C:mitochondrial outer membrane GO:0005778C:peroxisomal membrane GO:0005886C:plasma membrane GO:0045202C:synapse |
Other
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SRR924330_primary_scf7180002856066_216-1368
Len: 1,152 bp
Hits: 20
E-val: 2.60E-105
Sim: 89.73%
|
XP_018978867.1 E3 ubiquitin-protein ligase Mdm2 isoform X1 |
GO:0010468P:regulation of gene expression GO:0016567P:protein ubiquitination GO:0043066P:negative regulation of apoptotic process GO:0051726P:regulation of cell cycle GO:0065008P:regulation of biological quality GO:0002039F:p53 binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042802F:identical protein binding GO:0061630F:ubiquitin protein ligase activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924330_primary_scf7180002856068_1-986
Len: 985 bp
Hits: 20
E-val: 8.80E-46
Sim: 99.15%
|
XP_026089322.1protein Wnt-7b-like |
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR924330_primary_scf7180002856312_1-1011
Len: 1,010 bp
Hits: 20
E-val: 1.20E-21
Sim: 90.16%
|
AAH96935.1Wu:fd12d03 protein, partial |
GO:0006338P:chromatin remodeling GO:0006508P:proteolysis GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0004252F:serine-type endopeptidase activity GO:0004725F:protein tyrosine phosphatase activity GO:0005509F:calcium ion binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0042393F:histone binding GO:0061749F:forked DNA-dependent helicase activity GO:0140658F:ATP-dependent chromatin remodeler activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0016581C:NuRD complex |
Protein Degradation
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SRR924330_primary_scf7180002856507_320-959
Len: 639 bp
Hits: 20
E-val: 2.80E-24
Sim: 91.92%
|
XP_018597817.1 adenosylhomocysteinase |
GO:0006730P:one-carbon metabolic process GO:0033353P:S-adenosylmethionine cycle GO:0004013F:adenosylhomocysteinase activity GO:0005829C:cytosol |
Metabolism
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SRR924330_primary_scf7180002856661_1-374
Len: 373 bp
Hits: 20
E-val: 4.30E-17
Sim: 100%
|
XP_026097535.1rho guanine nucleotide exchange factor 10-like protein isoform X1 |
GO:0032933P:SREBP signaling pathway GO:0051496P:positive regulation of stress fiber assembly GO:0000166F:nucleotide binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005829C:cytosol GO:0016020C:membrane |
Cell Signaling
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SRR924330_primary_scf7180002856734_1-892
Len: 891 bp
Hits: 20
E-val: 3.30E-23
Sim: 89.63%
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XP_016356130.1 C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8 isoform X1 |
GO:0007399P:nervous system development GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space |
Protein Degradation
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SRR924330_primary_scf7180002856786_86-739
Len: 653 bp
Hits: 20
E-val: 2.80E-125
Sim: 89.88%
|
XP_018980001.1 mitochondrial ubiquitin ligase activator of nfkb 1-A-like |
GO:0000266P:mitochondrial fission GO:0016567P:protein ubiquitination GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0051646P:mitochondrion localization GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0042802F:identical protein binding GO:0061630F:ubiquitin protein ligase activity GO:0005741C:mitochondrial outer membrane GO:0005777C:peroxisome |
DNA Metabolism
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SRR924330_primary_scf7180002856957_1-1194
Len: 1,193 bp
Hits: 20
E-val: 4.00E-16
Sim: 97.4%
|
XP_026079466.1thioredoxin-related transmembrane protein 1 |
GO:0015036F:disulfide oxidoreductase activity GO:0005789C:endoplasmic reticulum membrane |
Other
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SRR924330_primary_scf7180002857708_124-900
Len: 776 bp
Hits: 20
E-val: 1.60E-135
Sim: 93.33%
|
XP_018965720.1 transcription factor AP-1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0042127P:regulation of cell population proliferation GO:0051726P:regulation of cell cycle GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005667C:transcription regulator complex |
Transcription Regulation
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SRR924330_primary_scf7180002857833_1-843
Len: 842 bp
Hits: 20
E-val: 2.80E-32
Sim: 57.35%
|
XP_018974198.1 3-hydroxyanthranilate 3,4-dioxygenase |
GO:0009072P:aromatic amino acid metabolic process GO:0019363P:pyridine nucleotide biosynthetic process GO:0046872F:metal ion binding |
Metabolism
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SRR924330_primary_scf7180002858153_1-845
Len: 844 bp
Hits: 20
E-val: 8.10E-32
Sim: 86.25%
|
RXN31665.1MMS22-like protein |
GO:0000724P:double-strand break repair via homologous recombination GO:0006325P:chromatin organization GO:0031297P:replication fork processing GO:0003697F:single-stranded DNA binding GO:0035101C:FACT complex GO:0042555C:MCM complex GO:0043596C:nuclear replication fork GO:0090734C:site of DNA damage |
DNA Metabolism
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SRR924330_primary_scf7180002858766_1-517
Len: 516 bp
Hits: 20
E-val: 5.90E-33
Sim: 72.11%
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ROL42346.1Serine/threonine-protein kinase MRCK beta |
GO:0031032P:actomyosin structure organization GO:0004674F:protein serine/threonine kinase activity GO:0043167F:ion binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0042995C:cell projection |
Signal Transduction
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SRR924330_primary_scf7180002860494_351-1039
Len: 688 bp
Hits: 20
E-val: 6.70E-117
Sim: 98.71%
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XP_018977543.1 FERM domain-containing protein 4A isoform X1 |
GO:0090162P:establishment of epithelial cell polarity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005912C:adherens junction GO:0005923C:bicellular tight junction |
Other
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