Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924330_primary_scf7180002861763_234-1186
Len: 952 bp
Hits: 20
E-val: 1.80E-35
Sim: 91.15%
|
XP_018941099.1 probable E3 ubiquitin-protein ligase HERC4 |
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924330_primary_scf7180002864575_1-495
Len: 494 bp
Hits: 20
E-val: 1.30E-98
Sim: 99.33%
|
XP_018939147.1 thrombospondin type-1 domain-containing protein 7A |
GO:0002040P:sprouting angiogenesis GO:0003094P:glomerular filtration GO:0007155P:cell adhesion GO:0008593P:regulation of Notch signaling pathway GO:0030036P:actin cytoskeleton organization GO:0043534P:blood vessel endothelial cell migration GO:0048675P:axon extension GO:0072015P:podocyte development GO:0005886C:plasma membrane GO:0031012C:extracellular matrix GO:0042995C:cell projection |
Cell Signaling
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SRR924330_primary_scf7180002864592_1-1004
Len: 1,003 bp
Hits: 20
E-val: 2.40E-22
Sim: 100%
|
AAH90411.1Dopey1 protein, partial |
GO:0006895P:Golgi to endosome transport GO:0015031P:protein transport GO:0005768C:endosome GO:0005802C:trans-Golgi network GO:0005829C:cytosol |
Other
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SRR924330_primary_scf7180002868768_309-668
Len: 359 bp
Hits: 20
E-val: 1.20E-32
Sim: 97.64%
|
XP_026060035.1protein tweety homolog 3 |
GO:0015813P:L-glutamate transmembrane transport GO:1902476P:chloride transmembrane transport GO:0005229F:intracellularly calcium-gated chloride channel activity GO:0005509F:calcium ion binding GO:0072320F:volume-sensitive chloride channel activity GO:0005886C:plasma membrane GO:0034707C:chloride channel complex |
Ion Transport
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SRR924330_primary_scf7180002920255_816-1139
Len: 323 bp
Hits: 20
E-val: 5.30E-24
Sim: 99.83%
|
XP_026083780.1sodium/hydrogen exchanger 1-like |
GO:0051453P:regulation of intracellular pH GO:0071805P:potassium ion transmembrane transport GO:0098719P:sodium ion import across plasma membrane GO:1902600P:proton transmembrane transport GO:0005516F:calmodulin binding GO:0015385F:sodium:proton antiporter activity GO:0015386F:potassium:proton antiporter activity GO:0016323C:basolateral plasma membrane |
Membrane Transport
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SRR924330_primary_scf7180002920356_1-1145
Len: 1,144 bp
Hits: 20
E-val: 3.30E-12
Sim: 89.93%
|
XP_018966910.1 aftiphilin isoform X2 |
GO:0046907P:intracellular transport GO:0030276F:clathrin binding GO:0030121C:AP-1 adaptor complex GO:0032588C:trans-Golgi network membrane |
Other
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SRR924330_primary_scf7180002920659_1-1147
Len: 1,146 bp
Hits: 20
E-val: 4.50E-25
Sim: 100%
|
XP_026093703.1connector enhancer of kinase suppressor of ras 2-like isoform X3 |
GO:0009966P:regulation of signal transduction GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924330_primary_scf7180002920697_635-1291
Len: 656 bp
Hits: 20
E-val: 3.50E-99
Sim: 71.74%
|
XP_018945081.1 thioredoxin domain-containing protein 15-like isoform X1 |
Other
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|
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SRR924330_primary_scf7180002920700_220-980
Len: 760 bp
Hits: 20
E-val: 1.40E-11
Sim: 85.08%
|
XP_018976046.1 LOW QUALITY PROTEIN: lateral signaling target protein 2 homolog |
GO:0007175P:negative regulation of epidermal growth factor-activated receptor activity GO:0009117P:nucleotide metabolic process GO:0000166F:nucleotide binding GO:0000287F:magnesium ion binding GO:0008253F:5'-nucleotidase activity GO:0008270F:zinc ion binding GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0005829C:cytosol GO:0031901C:early endosome membrane |
Cell Signaling
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SRR924330_primary_scf7180002920789_1-920
Len: 919 bp
Hits: 20
E-val: 6.80E-40
Sim: 67.42%
|
XP_016418729.1 ras GTPase-activating-like protein IQGAP1 |
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0072015P:podocyte development GO:0005515F:protein binding GO:0110165C:cellular anatomical structure |
Other
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SRR924330_primary_scf7180002920845_1-923
Len: 922 bp
Hits: 20
E-val: 2.80E-17
Sim: 87.21%
|
XP_016138242.1 RNA-binding motif, single-stranded-interacting protein 1-like |
GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0016477P:cell migration GO:0033627P:cell adhesion mediated by integrin GO:0098609P:cell-cell adhesion GO:0003730F:mRNA 3'-UTR binding GO:0005178F:integrin binding GO:0008143F:poly(A) binding GO:0008266F:poly(U) RNA binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005925C:focal adhesion GO:0009986C:cell surface GO:0034685C:integrin alphav-beta6 complex GO:1990904C:ribonucleoprotein complex |
Cell Signaling
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SRR924330_primary_scf7180002921038_1-1122
Len: 1,121 bp
Hits: 20
E-val: 4.20E-44
Sim: 78.04%
|
RXN04762.1kinesin KIF20A |
GO:0007018P:microtubule-based movement GO:0007507P:heart development GO:0051231P:spindle elongation GO:0090307P:mitotic spindle assembly GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0008574F:plus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005871C:kinesin complex GO:0005876C:spindle microtubule GO:0072686C:mitotic spindle |
Other
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SRR924330_primary_scf7180002921192_1-569
Len: 568 bp
Hits: 20
E-val: 2.00E-21
Sim: 97.41%
|
CDQ61588.1unnamed protein product |
GO:0000209P:protein polyubiquitination GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity |
DNA Metabolism
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SRR924330_primary_scf7180002921293_1-440
Len: 439 bp
Hits: 20
E-val: 4.10E-27
Sim: 95.97%
|
XP_018978777.1 catenin alpha-1-like |
GO:0001894P:tissue homeostasis GO:0016477P:cell migration GO:0034334P:adherens junction maintenance GO:0043009P:chordate embryonic development GO:0098609P:cell-cell adhesion GO:0005198F:structural molecule activity GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0051015F:actin filament binding GO:0005634C:nucleus GO:0005902C:microvillus GO:0005912C:adherens junction GO:0005938C:cell cortex GO:0015629C:actin cytoskeleton GO:0016342C:catenin complex |
Other
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SRR924330_primary_scf7180002921492_1-127
Len: 126 bp
Hits: 20
E-val: 9.40E-17
Sim: 100%
|
XP_026071394.1protein scribble homolog isoform X3 |
GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0098609P:cell-cell adhesion GO:0098887P:neurotransmitter receptor transport, endosome to postsynaptic membrane GO:0098968P:neurotransmitter receptor transport postsynaptic membrane to endosome GO:0019901F:protein kinase binding GO:0005912C:adherens junction GO:0014069C:postsynaptic density GO:0016323C:basolateral plasma membrane GO:0045211C:postsynaptic membrane |
Signal Transduction
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SRR924330_primary_scf7180002921935_1-741
Len: 740 bp
Hits: 20
E-val: 6.00E-47
Sim: 79.65%
|
XP_018966230.1 CCR4-NOT transcription complex subunit 2-like |
GO:0000289P:nuclear-transcribed mRNA poly(A) tail shortening GO:0006355P:regulation of DNA-templated transcription GO:2000036P:regulation of stem cell population maintenance GO:0000932C:P-body GO:0030015C:CCR4-NOT core complex |
Transcription Regulation
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SRR924330_primary_scf7180002922095_594-1467
Len: 873 bp
Hits: 20
E-val: 3.40E-158
Sim: 90.76%
|
XP_018938184.1 zinc finger protein 281-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924330_primary_scf7180002923393_184-1272
Len: 1,088 bp
Hits: 20
E-val: 4.10E-193
Sim: 97.13%
|
XP_018947473.1 urotensin-2 receptor-like isoform X1 |
GO:0007218P:neuropeptide signaling pathway GO:0008217P:regulation of blood pressure GO:0097746P:blood vessel diameter maintenance GO:0001604F:urotensin II receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924330_primary_scf7180002924869_148-666
Len: 518 bp
Hits: 20
E-val: 6.70E-45
Sim: 65.35%
|
XP_026099488.1interleukin enhancer-binding factor 2 homolog |
GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003725F:double-stranded RNA binding GO:0005634C:nucleus GO:0071013C:catalytic step 2 spliceosome |
Transcription Regulation
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SRR924330_primary_scf7180002925107_1-761
Len: 760 bp
Hits: 20
E-val: 5.40E-136
Sim: 96.7%
|
XP_018975754.1 LOW QUALITY PROTEIN: endoribonuclease Dicer-like |
GO:0006309P:apoptotic DNA fragmentation GO:0014032P:neural crest cell development GO:0021591P:ventricular system development GO:0030318P:melanocyte differentiation GO:0030422P:siRNA processing GO:0031054P:pre-miRNA processing GO:0031507P:heterochromatin formation GO:0035279P:miRNA-mediated gene silencing by mRNA destabilization GO:0050767P:regulation of neurogenesis GO:0098795P:global gene silencing by mRNA cleavage GO:1904888P:cranial skeletal system development GO:0003677F:DNA binding GO:0004386F:helicase activity GO:0004525F:ribonuclease III activity GO:0004530F:deoxyribonuclease I activity GO:0005515F:protein binding GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0070883F:pre-miRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016442C:RISC complex GO:0070578C:RISC-loading complex |
DNA Metabolism
|
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SRR924330_primary_scf7180002925119_1-1007
Len: 1,006 bp
Hits: 20
E-val: 1.50E-37
Sim: 96.09%
|
XP_018940765.1 paired box protein Pax-8-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007422P:peripheral nervous system development GO:0034672P:anterior/posterior pattern specification involved in pronephros development GO:0043049P:otic placode formation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924330_primary_scf7180002925487_514-910
Len: 396 bp
Hits: 20
E-val: 3.70E-19
Sim: 99.18%
|
XP_018973048.1 calcium-binding protein 39-like |
GO:0035556P:intracellular signal transduction GO:0043539F:protein serine/threonine kinase activator activity |
Signal Transduction
|
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SRR924330_primary_scf7180002926038_451-1062
Len: 611 bp
Hits: 20
E-val: 9.90E-72
Sim: 70.17%
|
XP_026145002.1chromodomain-helicase-DNA-binding protein 4-like isoform X2 |
GO:0006338P:chromatin remodeling GO:0031101P:fin regeneration GO:0003677F:DNA binding GO:0003678F:DNA helicase activity GO:0003682F:chromatin binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0043167F:ion binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0016581C:NuRD complex |
DNA Metabolism
|
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SRR924330_primary_scf7180002926450_1-1043
Len: 1,042 bp
Hits: 20
E-val: 4.80E-26
Sim: 68.13%
|
XP_026062252.1nucleoprotein TPR-like |
GO:0006913P:nucleocytoplasmic transport GO:0033036P:macromolecule localization GO:0071705P:nitrogen compound transport GO:0005635C:nuclear envelope |
Other
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SRR924330_primary_scf7180002928059_1-765
Len: 764 bp
Hits: 20
E-val: 3.80E-145
Sim: 99.57%
|
RXN18297.1Alpha-1,3-mannosyl-glyco 4-beta-N-acetylglucosaminyltransferase C-like protein |
GO:0006487P:protein N-linked glycosylation GO:0008375F:acetylglucosaminyltransferase activity GO:0016020C:membrane |
Other
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