Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924330_primary_scf7180002928387_1-1108
Len: 1,107 bp
Hits: 20
E-val: 2.20E-77
Sim: 96.7%
|
XP_018958719.1 LOW QUALITY PROTEIN: sodium channel protein type 3 subunit alpha-like |
GO:0019228P:neuronal action potential GO:0035725P:sodium ion transmembrane transport GO:0086010P:membrane depolarization during action potential GO:0005248F:voltage-gated sodium channel activity GO:0001518C:voltage-gated sodium channel complex |
Ion Transport
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SRR924330_primary_scf7180002929842_347-1071
Len: 724 bp
Hits: 20
E-val: 2.30E-120
Sim: 93.7%
|
XP_018932745.1 probable G-protein coupled receptor 171 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0035589P:G protein-coupled purinergic nucleotide receptor signaling pathway GO:0045028F:G protein-coupled purinergic nucleotide receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924330_primary_scf7180002931647_1-655
Len: 654 bp
Hits: 20
E-val: 6.50E-21
Sim: 64.55%
|
ROL55459.1Hippocampus abundant transcript 1 protein |
GO:0055085P:transmembrane transport GO:0140734P:ammonium excretion GO:0022857F:transmembrane transporter activity GO:0016020C:membrane |
Membrane Transport
|
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SRR924330_primary_scf7180002932338_1-797
Len: 796 bp
Hits: 20
E-val: 1.20E-141
Sim: 87.21%
|
XP_018948232.1 LOW QUALITY PROTEIN: metabotropic glutamate receptor 5 |
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0007206P:phospholipase C-activating G protein-coupled glutamate receptor signaling pathway GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0060078P:regulation of postsynaptic membrane potential GO:0099566P:regulation of postsynaptic cytosolic calcium ion concentration GO:0001640F:adenylate cyclase inhibiting G protein-coupled glutamate receptor activity GO:0099530F:G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential GO:0099583F:neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration GO:0098839C:postsynaptic density membrane |
Cell Signaling
|
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SRR924330_primary_scf7180002933566_527-1052
Len: 525 bp
Hits: 20
E-val: 2.60E-20
Sim: 98.7%
|
XP_018976255.1 mitogen-activated protein kinase-binding protein 1-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0043124P:negative regulation of canonical NF-kappaB signal transduction GO:0046330P:positive regulation of JNK cascade GO:0004930F:G protein-coupled receptor activity GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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SRR924330_primary_scf7180002934166_1-367
Len: 366 bp
Hits: 20
E-val: 7.60E-27
Sim: 89.7%
|
XP_016316235.1 zinc finger MIZ domain-containing protein 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0016925P:protein sumoylation GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0061665F:SUMO ligase activity GO:0000785C:chromatin |
Transcription Regulation
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SRR924330_primary_scf7180003102845_1-1211
Len: 1,210 bp
Hits: 20
E-val: 6.80E-40
Sim: 75.22%
|
XP_018933102.1 heparan sulfate 2-O-sulfotransferase 1-like |
GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0060828P:regulation of canonical Wnt signaling pathway GO:2000047P:regulation of cell-cell adhesion mediated by cadherin GO:0004394F:heparan sulfate 2-sulfotransferase activity GO:0004697F:diacylglycerol-dependent serine/threonine kinase activity GO:0005488F:binding GO:0005794C:Golgi apparatus GO:0016020C:membrane |
Signal Transduction
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SRR924330_primary_scf7180003103057_1-594
Len: 593 bp
Hits: 20
E-val: 7.50E-24
Sim: 85.5%
|
XP_016318027.1 ragulator complex protein LAMTOR1-like |
GO:0001919P:regulation of receptor recycling GO:0007040P:lysosome organization GO:0016197P:endosomal transport GO:0032008P:positive regulation of TOR signaling GO:0042632P:cholesterol homeostasis GO:0043410P:positive regulation of MAPK cascade GO:0071230P:cellular response to amino acid stimulus GO:0005085F:guanyl-nucleotide exchange factor activity GO:0060090F:molecular adaptor activity GO:0005765C:lysosomal membrane GO:0031902C:late endosome membrane GO:0045121C:membrane raft GO:0071986C:Ragulator complex |
Cell Signaling
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SRR924330_primary_scf7180003103161_753-1130
Len: 377 bp
Hits: 20
E-val: 1.60E-59
Sim: 98.7%
|
XP_016323705.1 WD repeat-containing protein 13-like |
DNA Metabolism
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SRR924330_primary_scf7180003103291_113-493
Len: 380 bp
Hits: 20
E-val: 9.20E-68
Sim: 77.88%
|
XP_018951559.1 nanos homolog 3-like |
GO:0001555P:oocyte growth GO:0001933P:negative regulation of protein phosphorylation GO:0006417P:regulation of translation GO:0008354P:germ cell migration GO:0036099P:female germ-line stem cell population maintenance GO:0003727F:single-stranded RNA binding GO:0008270F:zinc ion binding GO:0042802F:identical protein binding GO:0043186C:P granule |
Other
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SRR924330_primary_scf7180003103340_1-1113
Len: 1,112 bp
Hits: 20
E-val: 4.20E-20
Sim: 53.97%
|
NP_957282.1signal recognition particle 54 kDa protein |
GO:0045184P:establishment of protein localization GO:0046907P:intracellular transport GO:0048856P:anatomical structure development GO:0005488F:binding GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR924330_primary_scf7180003103536_1-1239
Len: 1,238 bp
Hits: 20
E-val: 5.60E-21
Sim: 63.5%
|
XP_016117933.1 sideroflexin-5-like, partial |
GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0031966C:mitochondrial membrane |
Membrane Transport
|
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SRR924330_primary_scf7180003103688_1-1214
Len: 1,213 bp
Hits: 20
E-val: 5.60E-26
Sim: 97.87%
|
XP_026096725.1RNA polymerase II subunit A C-terminal domain phosphatase-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus |
Signal Transduction
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SRR924330_primary_scf7180003103740_1-850
Len: 849 bp
Hits: 20
E-val: 2.60E-17
Sim: 99.89%
|
XP_026073804.1interleukin-1 receptor accessory protein-like 1-A isoform X1 |
GO:0019221P:cytokine-mediated signaling pathway GO:0045920P:negative regulation of exocytosis GO:0004908F:interleukin-1 receptor activity GO:0061809F:NAD+ nucleosidase activity, cyclic ADP-ribose generating GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0009986C:cell surface |
Cell Signaling
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SRR924330_primary_scf7180003103910_99-845
Len: 746 bp
Hits: 20
E-val: 1.10E-27
Sim: 97.51%
|
AAH66728.1Krt4 protein |
GO:0031424P:keratinization GO:0045109P:intermediate filament organization GO:0030280F:structural constituent of skin epidermis GO:0005615C:extracellular space GO:0016020C:membrane GO:0045095C:keratin filament |
Other
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SRR924330_primary_scf7180003104577_1-1105
Len: 1,104 bp
Hits: 20
E-val: 1.80E-07
Sim: 74.53%
|
ROI46635.1Double C2-like domain-containing protein beta |
Other
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|
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SRR924330_primary_scf7180003104925_1-1014
Len: 1,013 bp
Hits: 20
E-val: 8.90E-134
Sim: 93.06%
|
XP_018934836.1 ankyrin repeat domain-containing protein 33-like |
GO:0043010P:camera-type eye development GO:0016020C:membrane |
Other
|
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SRR924330_primary_scf7180003107275_1-951
Len: 950 bp
Hits: 20
E-val: 1.10E-45
Sim: 71.47%
|
XP_020480283.1MAP/microtubule affinity-regulating kinase 3-like isoform X1 |
GO:0009987P:cellular process GO:0004672F:protein kinase activity GO:0110165C:cellular anatomical structure |
Signal Transduction
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SRR924330_primary_scf7180003107435_1-1207
Len: 1,206 bp
Hits: 20
E-val: 4.40E-31
Sim: 83.53%
|
XP_016426015.1 LOW QUALITY PROTEIN: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like, partial |
GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030210P:heparin proteoglycan biosynthetic process GO:0015016F:heparan sulfate N-sulfotransferase activity GO:0016787F:hydrolase activity GO:0019213F:deacetylase activity GO:0000139C:Golgi membrane |
Other
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SRR924330_primary_scf7180003107667_252-801
Len: 549 bp
Hits: 20
E-val: 1.10E-48
Sim: 88.56%
|
XP_018975611.1 F-box only protein 48-like |
GO:0016567P:protein ubiquitination GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0005737C:cytoplasm GO:0019005C:SCF ubiquitin ligase complex |
DNA Metabolism
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SRR924330_primary_scf7180003109565_1-546
Len: 545 bp
Hits: 20
E-val: 9.00E-24
Sim: 96.07%
|
XP_016123897.1 redox-regulatory protein FAM213A-like |
GO:0098869P:cellular oxidant detoxification GO:0016209F:antioxidant activity GO:0005737C:cytoplasm GO:0016020C:membrane |
Other
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SRR924330_primary_scf7180003111526_1-876
Len: 875 bp
Hits: 20
E-val: 3.00E-77
Sim: 71.14%
|
XP_016399436.1 catenin delta-2-like |
GO:0007155P:cell adhesion GO:0048856P:anatomical structure development GO:0005622C:intracellular anatomical structure GO:0043226C:organelle GO:0070161C:anchoring junction |
Other
|
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SRR924332_primary_scf7180002782711_3805-4692
Len: 887 bp
Hits: 20
E-val: 3.90E-77
Sim: 64.6%
|
XP_021334226.1nephrocystin-4-like |
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0008233F:peptidase activity GO:0140640F:catalytic activity, acting on a nucleic acid GO:0005622C:intracellular anatomical structure |
Protein Degradation
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SRR924332_primary_scf7180002782742_1517-7480
Len: 5,963 bp
Hits: 20
E-val: 0
Sim: 71.14%
|
RXN17862.1Retrovirus-related Pol polyprotein from transposon 297 |
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0140640F:catalytic activity, acting on a nucleic acid |
Metabolism
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SRR924332_primary_scf7180002782782_291-1214
Len: 923 bp
Hits: 20
E-val: 1.10E-71
Sim: 66.51%
|
ROL51232.1LINE-1 type transposase domain-containing protein 1 |
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
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