Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924332_primary_scf7180002789263_1-994
Len: 993 bp
Hits: 20
E-val: 2.70E-18
Sim: 96.23%
|
XP_016419500.1 espin-like |
GO:0007605P:sensory perception of sound GO:0051017P:actin filament bundle assembly GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0032420C:stereocilium |
Other
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SRR924332_primary_scf7180002789875_1-1487
Len: 1,486 bp
Hits: 20
E-val: 3.00E-255
Sim: 96.52%
|
XP_016097811.1 protein LAP2 |
GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0098609P:cell-cell adhesion GO:0098887P:neurotransmitter receptor transport, endosome to postsynaptic membrane GO:0098968P:neurotransmitter receptor transport postsynaptic membrane to endosome GO:0019901F:protein kinase binding GO:0005912C:adherens junction GO:0014069C:postsynaptic density GO:0016323C:basolateral plasma membrane GO:0045211C:postsynaptic membrane |
Signal Transduction
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SRR924332_primary_scf7180002791011_1-1380
Len: 1,379 bp
Hits: 20
E-val: 9.30E-235
Sim: 91.1%
|
XP_026052854.1alpha-2Db adrenergic receptor |
GO:0006940P:regulation of smooth muscle contraction GO:0019229P:regulation of vasoconstriction GO:0030168P:platelet activation GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0051379F:epinephrine binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924332_primary_scf7180002791013_1-1364
Len: 1,363 bp
Hits: 20
E-val: 2.90E-31
Sim: 99.86%
|
XP_026110614.1receptor-type tyrosine-protein phosphatase S-like |
GO:0006338P:chromatin remodeling GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0070593P:dendrite self-avoidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0098632F:cell-cell adhesion mediator activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane GO:0030424C:axon |
DNA Metabolism
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SRR924332_primary_scf7180002791090_1-1223
Len: 1,222 bp
Hits: 20
E-val: 5.50E-37
Sim: 98.35%
|
XP_016336661.1 cadherin-2-like |
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
Other
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SRR924332_primary_scf7180002791143_1-1050
Len: 1,049 bp
Hits: 20
E-val: 2.60E-64
Sim: 95.39%
|
XP_018944304.1 LOW QUALITY PROTEIN: adhesion G protein-coupled receptor A3-like |
GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0014069C:postsynaptic density GO:0098978C:glutamatergic synapse |
Cell Signaling
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SRR924332_primary_scf7180002791192_670-921
Len: 251 bp
Hits: 20
E-val: 3.20E-37
Sim: 95.34%
|
XP_018926662.1 one cut domain family member 2-like, partial |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002791251_1-944
Len: 943 bp
Hits: 20
E-val: 1.50E-26
Sim: 87.17%
|
XP_026109702.1galectin-3-like |
GO:0002548P:monocyte chemotaxis GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0030154P:cell differentiation GO:0030593P:neutrophil chemotaxis GO:0045087P:innate immune response GO:0045806P:negative regulation of endocytosis GO:0048245P:eosinophil chemotaxis GO:0048246P:macrophage chemotaxis GO:0050918P:positive chemotaxis GO:0090280P:positive regulation of calcium ion import GO:2001237P:negative regulation of extrinsic apoptotic signaling pathway GO:0019863F:IgE binding GO:0043236F:laminin binding GO:0048030F:disaccharide binding GO:0001772C:immunological synapse GO:0005615C:extracellular space GO:0005681C:spliceosomal complex GO:0005737C:cytoplasm |
Cell Signaling
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SRR924332_primary_scf7180002791266_548-1558
Len: 1,010 bp
Hits: 20
E-val: 6.90E-187
Sim: 84.73%
|
XP_016376088.1 zinc finger protein 91-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006508P:proteolysis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002791322_1-739
Len: 738 bp
Hits: 20
E-val: 6.00E-31
Sim: 97.53%
|
XP_018937051.1 long-chain fatty acid transport protein 4-like |
GO:0001579P:medium-chain fatty acid transport GO:0001676P:long-chain fatty acid metabolic process GO:0006281P:DNA repair GO:0044539P:long-chain fatty acid import into cell GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0090434F:oleoyl-CoA ligase activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
Membrane Transport
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SRR924332_primary_scf7180002791501_120-1079
Len: 959 bp
Hits: 20
E-val: 2.40E-32
Sim: 99.11%
|
XP_018960022.1 bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase-like |
GO:0006047P:UDP-N-acetylglucosamine metabolic process GO:0046835P:carbohydrate phosphorylation GO:0004553F:hydrolase activity, hydrolyzing O-glycosyl compounds GO:0008761F:UDP-N-acetylglucosamine 2-epimerase activity GO:0009384F:N-acylmannosamine kinase activity |
Signal Transduction
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SRR924332_primary_scf7180002791589_137-882
Len: 745 bp
Hits: 20
E-val: 6.10E-15
Sim: 91.78%
|
XP_018942076.1 protein ripply2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001756P:somitogenesis GO:0009798P:axis specification GO:0009880P:embryonic pattern specification GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002791865_1-499
Len: 498 bp
Hits: 20
E-val: 7.40E-41
Sim: 92.31%
|
XP_026059217.1histone H1-like |
GO:0006334P:nucleosome assembly GO:0003677F:DNA binding GO:0030527F:structural constituent of chromatin GO:0000786C:nucleosome GO:0005634C:nucleus |
DNA Metabolism
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SRR924332_primary_scf7180002791968_1-938
Len: 937 bp
Hits: 20
E-val: 1.20E-23
Sim: 97.91%
|
RXN28947.1dnaJ -like protein |
GO:0006457P:protein folding GO:0006508P:proteolysis GO:0004252F:serine-type endopeptidase activity GO:0051082F:unfolded protein binding GO:0051787F:misfolded protein binding GO:0005783C:endoplasmic reticulum |
Protein Degradation
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SRR924332_primary_scf7180002792066_1-1329
Len: 1,328 bp
Hits: 20
E-val: 4.30E-27
Sim: 97.9%
|
XP_016138739.1 probable JmjC domain-containing histone demethylation protein 2C |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0061515P:myeloid cell development GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032454F:histone H3K9 demethylase activity GO:0051213F:dioxygenase activity GO:0000118C:histone deacetylase complex GO:0000785C:chromatin |
Transcription Regulation
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SRR924332_primary_scf7180002792116_1-1212
Len: 1,211 bp
Hits: 20
E-val: 2.50E-18
Sim: 99.38%
|
AAO16681.3monoamine oxidase |
GO:0001964P:startle response GO:0006584P:catecholamine metabolic process GO:0035176P:social behavior GO:0036269P:swimming behavior GO:0042402P:biogenic amine catabolic process GO:0008131F:primary methylamine oxidase activity GO:0050660F:flavin adenine dinucleotide binding GO:0097621F:monoamine oxidase activity GO:0005741C:mitochondrial outer membrane |
Metabolism
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SRR924332_primary_scf7180002792519_1-660
Len: 659 bp
Hits: 20
E-val: 4.30E-28
Sim: 95.02%
|
XP_016129289.1 RNA polymerase II elongation factor ELL-like |
GO:0006414P:translational elongation GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0042795P:snRNA transcription by RNA polymerase II GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003746F:translation elongation factor activity GO:0008023C:transcription elongation factor complex |
Transcription Regulation
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SRR924332_primary_scf7180002792578_156-1235
Len: 1,079 bp
Hits: 20
E-val: 8.20E-162
Sim: 93.62%
|
XP_016368454.1 alpha-internexin-like |
GO:0045109P:intermediate filament organization GO:0048812P:neuron projection morphogenesis GO:0099185P:postsynaptic intermediate filament cytoskeleton organization GO:0099184F:structural constituent of postsynaptic intermediate filament cytoskeleton GO:0005737C:cytoplasm GO:0005882C:intermediate filament GO:0099160C:postsynaptic intermediate filament cytoskeleton |
Other
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SRR924332_primary_scf7180002792823_1-741
Len: 740 bp
Hits: 20
E-val: 1.10E-43
Sim: 89.04%
|
XP_026063155.1growth hormone receptor-like isoform X3 |
GO:0019221P:cytokine-mediated signaling pathway GO:0004896F:cytokine receptor activity GO:0019955F:cytokine binding GO:0046872F:metal ion binding GO:0009897C:external side of plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR924332_primary_scf7180002792855_1-275
Len: 274 bp
Hits: 20
E-val: 2.90E-15
Sim: 73.68%
|
XP_026129117.1polypyrimidine tract-binding protein 3-like isoform X3 |
Other
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SRR924332_primary_scf7180002792865_1-631
Len: 630 bp
Hits: 20
E-val: 2.10E-08
Sim: 95.97%
|
XP_016103108.1 MARCKS-related protein |
GO:0003407P:neural retina development GO:0007015P:actin filament organization GO:0007417P:central nervous system development GO:0051216P:cartilage development GO:0072554P:blood vessel lumenization GO:0005516F:calmodulin binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane |
Other
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SRR924332_primary_scf7180002793035_1-840
Len: 839 bp
Hits: 20
E-val: 1.30E-143
Sim: 90.69%
|
XP_018937809.1 beta-2 adrenergic receptor-like |
GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924332_primary_scf7180002793646_129-1232
Len: 1,103 bp
Hits: 20
E-val: 7.70E-123
Sim: 70.02%
|
XP_026051441.1POU domain, class 4, transcription factor 3-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003723F:RNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924332_primary_scf7180002793735_478-930
Len: 452 bp
Hits: 20
E-val: 1.70E-23
Sim: 97.78%
|
XP_021429059.1lymphoid enhancer-binding factor 1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060070P:canonical Wnt signaling pathway GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:1990907C:beta-catenin-TCF complex |
Cell Signaling
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SRR924332_primary_scf7180002793797_1-1064
Len: 1,063 bp
Hits: 20
E-val: 3.70E-21
Sim: 77.49%
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XP_016108002.1 tenascin-X-like |
GO:0030155P:regulation of cell adhesion GO:0031175P:neuron projection development GO:0031347P:regulation of defense response GO:0030246F:carbohydrate binding GO:0005615C:extracellular space GO:0042995C:cell projection |
Other
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