Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924332_primary_scf7180002821422_123-1689
Len: 1,566 bp
Hits: 20
E-val: 1.40E-186
Sim: 92.44%
|
XP_018981215.1 LOW QUALITY PROTEIN: kinase D-interacting substrate of 220 kDa-like |
GO:0016301F:kinase activity GO:0019887F:protein kinase regulator activity GO:0030165F:PDZ domain binding GO:0016020C:membrane |
Signal Transduction
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SRR924332_primary_scf7180002821435_1-1003
Len: 1,002 bp
Hits: 20
E-val: 3.90E-182
Sim: 88.13%
|
XP_018951802.1 G-protein coupled receptor 84-like |
GO:0007218P:neuropeptide signaling pathway GO:0032496P:response to lipopolysaccharide GO:0001604F:urotensin II receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924332_primary_scf7180002821444_125-811
Len: 686 bp
Hits: 20
E-val: 8.40E-120
Sim: 94.9%
|
XP_018954963.1 probable N-acetyltransferase CML1 |
GO:0003401P:axis elongation GO:0015701P:bicarbonate transport GO:0030003P:intracellular monoatomic cation homeostasis GO:0043009P:chordate embryonic development GO:0071578P:zinc ion import across plasma membrane GO:0005385F:zinc ion transmembrane transporter activity GO:0008080F:N-acetyltransferase activity GO:0140410F:monoatomic cation:bicarbonate symporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR924332_primary_scf7180002821512_1-1461
Len: 1,460 bp
Hits: 20
E-val: 5.90E-139
Sim: 98.24%
|
XP_026084717.1E3 ubiquitin-protein ligase TRIM71 |
GO:0000082P:G1/S transition of mitotic cell cycle GO:0000209P:protein polyubiquitination GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010172P:embryonic body morphogenesis GO:0021915P:neural tube development GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051865P:protein autoubiquitination GO:0072089P:stem cell proliferation GO:2000177P:regulation of neural precursor cell proliferation GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0035198F:miRNA binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body GO:0005739C:mitochondrion |
Cell Signaling
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SRR924332_primary_scf7180002821626_1-794
Len: 793 bp
Hits: 20
E-val: 1.20E-53
Sim: 90.45%
|
XP_016135225.1 plasma membrane calcium-transporting ATPase 1-like |
GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0005388F:P-type calcium transporter activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030165F:PDZ domain binding GO:0005886C:plasma membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR924332_primary_scf7180002821743_1-1063
Len: 1,062 bp
Hits: 20
E-val: 1.10E-20
Sim: 90.06%
|
XP_013988156.1 low-density lipoprotein receptor-related protein 1-like isoform X4 |
GO:0006898P:receptor-mediated endocytosis GO:0006909P:phagocytosis GO:0060070P:canonical Wnt signaling pathway GO:0150093P:amyloid-beta clearance by transcytosis GO:0150094P:amyloid-beta clearance by cellular catabolic process GO:1901342P:regulation of vasculature development GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0017147F:Wnt-protein binding GO:0034185F:apolipoprotein binding GO:0042562F:hormone binding GO:0042813F:Wnt receptor activity GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Cell Signaling
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SRR924332_primary_scf7180002821770_334-1312
Len: 978 bp
Hits: 20
E-val: 1.00E-134
Sim: 95.2%
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XP_018977846.1 testis-expressed sequence 2 protein-like isoform X1 |
Other
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SRR924332_primary_scf7180002821774_1-1211
Len: 1,210 bp
Hits: 20
E-val: 4.90E-14
Sim: 97.62%
|
XP_026142974.1protein piccolo-like isoform X4 |
GO:0035418P:protein localization to synapse GO:0048790P:maintenance of presynaptic active zone structure GO:1904071P:presynaptic active zone assembly GO:0008270F:zinc ion binding GO:0098882F:structural constituent of presynaptic active zone GO:0016020C:membrane GO:0030424C:axon GO:0048788C:cytoskeleton of presynaptic active zone GO:0098978C:glutamatergic synapse GO:0098982C:GABA-ergic synapse |
Other
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SRR924332_primary_scf7180002821812_1-766
Len: 765 bp
Hits: 20
E-val: 8.70E-33
Sim: 97.76%
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XP_014436171.1LOW QUALITY PROTEIN: discoidin domain-containing receptor 2 |
GO:0003416P:endochondral bone growth GO:0006048P:UDP-N-acetylglucosamine biosynthetic process GO:0006695P:cholesterol biosynthetic process GO:0007155P:cell adhesion GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010763P:positive regulation of fibroblast migration GO:0010976P:positive regulation of neuron projection development GO:0018108P:peptidyl-tyrosine phosphorylation GO:0030199P:collagen fibril organization GO:0030500P:regulation of bone mineralization GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0032967P:positive regulation of collagen biosynthetic process GO:0034103P:regulation of tissue remodeling GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0035988P:chondrocyte proliferation GO:0035994P:response to muscle stretch GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0045669P:positive regulation of osteoblast differentiation GO:0045860P:positive regulation of protein kinase activity GO:0046777P:protein autophosphorylation GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051091P:positive regulation of DNA-binding transcription factor activity GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0071456P:cellular response to hypoxia GO:0071560P:cellular response to transforming growth factor beta stimulus GO:0090091P:positive regulation of extracellular matrix disassembly GO:0090303P:positive regulation of wound healing GO:1900087P:positive regulation of G1/S transition of mitotic cell cycle GO:1901299P:negative regulation of hydrogen peroxide-mediated programmed cell death GO:1904385P:cellular response to angiotensin GO:1904707P:positive regulation of vascular associated smooth muscle cell proliferation GO:1904754P:positive regulation of vascular associated smooth muscle cell migration GO:1904899P:positive regulation of hepatic stellate cell proliferation GO:2000491P:positive regulation of hepatic stellate cell activation GO:0000253F:3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity GO:0003977F:UDP-N-acetylglucosamine diphosphorylase activity GO:0004303F:estradiol 17-beta-dehydrogenase [NAD(P)+] activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005515F:protein binding GO:0005518F:collagen binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0047024F:5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005789C:endoplasmic reticulum membrane GO:0015629C:actin cytoskeleton GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
Signal Transduction
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SRR924332_primary_scf7180002821973_217-513
Len: 296 bp
Hits: 20
E-val: 1.40E-42
Sim: 96.12%
|
XP_018948843.1 free fatty acid receptor 3-like |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0071398P:cellular response to fatty acid GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924332_primary_scf7180002821973_537-1199
Len: 662 bp
Hits: 20
E-val: 3.60E-120
Sim: 88.8%
|
XP_018948844.1 free fatty acid receptor 3-like isoform X1 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0071398P:cellular response to fatty acid GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924332_primary_scf7180002821979_1-668
Len: 667 bp
Hits: 20
E-val: 6.40E-72
Sim: 82.69%
|
XP_016149520.1 OTU domain-containing protein 5-A-like |
GO:0006508P:proteolysis GO:0032496P:response to lipopolysaccharide GO:0050776P:regulation of immune response GO:0070536P:protein K63-linked deubiquitination GO:0071108P:protein K48-linked deubiquitination GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:1904263P:positive regulation of TORC1 signaling GO:1904515P:positive regulation of TORC2 signaling GO:0004843F:cysteine-type deubiquitinase activity GO:0061578F:K63-linked deubiquitinase activity |
Cell Signaling
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SRR924332_primary_scf7180002821988_1-1003
Len: 1,002 bp
Hits: 20
E-val: 2.90E-36
Sim: 88.52%
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XP_016116165.1 zinc finger protein 239-like, partial |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0032991C:protein-containing complex |
Transcription Regulation
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SRR924332_primary_scf7180002822205_23-676
Len: 653 bp
Hits: 20
E-val: 1.00E-82
Sim: 98.04%
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XP_018960137.1 zinc finger protein 768-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924332_primary_scf7180002822236_1-934
Len: 933 bp
Hits: 20
E-val: 3.00E-96
Sim: 80.97%
|
XP_016130474.1 max-binding protein MNT-like |
GO:0000132P:establishment of mitotic spindle orientation GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0048312P:intracellular distribution of mitochondria GO:0051012P:microtubule sliding GO:0051301P:cell division GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003729F:mRNA binding GO:0046983F:protein dimerization activity GO:0070840F:dynein complex binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005874C:microtubule GO:0005875C:microtubule associated complex |
Transcription Regulation
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SRR924332_primary_scf7180002822285_1-931
Len: 930 bp
Hits: 20
E-val: 1.50E-15
Sim: 98.04%
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CAD58743.1novel protein similar to human huntingtin-associated protein interacting protein (duo, HAPIP), partial |
GO:0048514P:blood vessel morphogenesis GO:0003676F:nucleic acid binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0008270F:zinc ion binding GO:0010314F:phosphatidylinositol-5-phosphate binding GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0043325F:phosphatidylinositol-3,4-bisphosphate binding GO:0070273F:phosphatidylinositol-4-phosphate binding GO:0080025F:phosphatidylinositol-3,5-bisphosphate binding |
Other
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SRR924332_primary_scf7180002822329_1-898
Len: 897 bp
Hits: 20
E-val: 7.60E-28
Sim: 52.05%
|
XP_016115499.1 gamma-aminobutyric acid receptor subunit rho-1-like |
GO:0006821P:chloride transport GO:0034220P:monoatomic ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0004888F:transmembrane signaling receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0034707C:chloride channel complex |
Cell Signaling
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SRR924332_primary_scf7180002822384_1-784
Len: 783 bp
Hits: 20
E-val: 8.60E-60
Sim: 91.04%
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XP_026141800.1E3 ubiquitin-protein ligase HECTD3-like |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity |
DNA Metabolism
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SRR924332_primary_scf7180002822546_1-954
Len: 953 bp
Hits: 20
E-val: 2.10E-113
Sim: 86.9%
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XP_018947617.1 LOW QUALITY PROTEIN: zinc finger protein 36, C3H1 type-like 2 |
GO:0061158P:3'-UTR-mediated mRNA destabilization GO:1900153P:positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0008270F:zinc ion binding GO:0035925F:mRNA 3'-UTR AU-rich region binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:1990904C:ribonucleoprotein complex |
Other
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SRR924332_primary_scf7180002822555_1-631
Len: 630 bp
Hits: 20
E-val: 2.10E-16
Sim: 91.35%
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XP_018933052.1 phosphatidylinositol 3-kinase catalytic subunit type 3-like |
GO:0000045P:autophagosome assembly GO:0006897P:endocytosis GO:0036092P:phosphatidylinositol-3-phosphate biosynthetic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0005524F:ATP binding GO:0016303F:1-phosphatidylinositol-3-kinase activity GO:0000407C:phagophore assembly site GO:0005768C:endosome GO:0005777C:peroxisome GO:0034271C:phosphatidylinositol 3-kinase complex, class III, type I GO:0034272C:phosphatidylinositol 3-kinase complex, class III, type II |
Signal Transduction
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SRR924332_primary_scf7180002822680_254-796
Len: 542 bp
Hits: 20
E-val: 1.20E-92
Sim: 93.26%
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XP_018943242.1 protein TASOR-like |
GO:0045814P:negative regulation of gene expression, epigenetic GO:0097355P:protein localization to heterochromatin GO:0003682F:chromatin binding GO:0000792C:heterochromatin GO:0005654C:nucleoplasm |
DNA Metabolism
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SRR924332_primary_scf7180002822698_1-1504
Len: 1,503 bp
Hits: 20
E-val: 1.30E-96
Sim: 72.6%
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XP_018971750.1 transducin-like enhancer protein 1 |
GO:0006355P:regulation of DNA-templated transcription GO:0048523P:negative regulation of cellular process |
Transcription Regulation
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SRR924332_primary_scf7180002823037_1-1096
Len: 1,095 bp
Hits: 20
E-val: 1.70E-42
Sim: 55%
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XP_026071954.1maspardin-like |
GO:0042609F:CD4 receptor binding GO:0005737C:cytoplasm GO:0005829C:cytosol GO:0030140C:trans-Golgi network transport vesicle |
Cell Signaling
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SRR924332_primary_scf7180002823324_1-900
Len: 899 bp
Hits: 20
E-val: 3.90E-40
Sim: 57.78%
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XP_018957997.1 E3 ubiquitin-protein ligase TRIM37 |
Other
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SRR924332_primary_scf7180002824451_1-408
Len: 407 bp
Hits: 20
E-val: 6.90E-37
Sim: 99.4%
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XP_026141027.1steroid hormone receptor ERR2 isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0048384P:retinoic acid receptor signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0034056F:estrogen response element binding GO:0042562F:hormone binding GO:0000785C:chromatin GO:0005634C:nucleus |
Cell Signaling
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