Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924333_primary_scf7180001594739_212-1003
Len: 791 bp
Hits: 20
E-val: 1.60E-127
Sim: 66.19%
|
RXN26735.1Transposon Ty3-G Gag-Pol poly |
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding |
DNA Metabolism
|
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SRR924333_primary_scf7180001596791_1-708
Len: 707 bp
Hits: 20
E-val: 7.10E-106
Sim: 89.68%
|
RXN20212.1adhesion G -coupled receptor A2 |
GO:0002040P:sprouting angiogenesis GO:0007186P:G protein-coupled receptor signaling pathway GO:0007417P:central nervous system development GO:0022009P:central nervous system vasculogenesis GO:0090263P:positive regulation of canonical Wnt signaling pathway GO:1904701P:Wnt-Frizzled-LRP5/6 complex assembly GO:1990791P:dorsal root ganglion development GO:0004930F:G protein-coupled receptor activity GO:0005515F:protein binding GO:0005886C:plasma membrane GO:1990909C:Wnt signalosome |
Cell Signaling
|
|
SRR924333_primary_scf7180001597040_1-949
Len: 948 bp
Hits: 20
E-val: 6.50E-38
Sim: 75.4%
|
KPP79873.1amyloid beta A4 precursor protein-binding family A member 2-like |
GO:0007268P:chemical synaptic transmission GO:0001540F:amyloid-beta binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0043197C:dendritic spine |
Other
|
|
SRR924334_primary_scf7180002196897_1226-5600
Len: 4,374 bp
Hits: 20
E-val: 0
Sim: 75.6%
|
RXN04716.1Retrovirus-related Pol polyprotein from transposon 297 |
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
Protein Degradation
|
|
SRR924334_primary_scf7180002196927_4368-4690
Len: 322 bp
Hits: 20
E-val: 1.70E-22
Sim: 68.3%
|
ROL47989.1LINE-1 retrotransposable element ORF1 protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR924334_primary_scf7180002196928_995-1954
Len: 959 bp
Hits: 20
E-val: 8.80E-67
Sim: 65.07%
|
XP_018937315.1 dual specificity phosphatase DUPD1-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043409P:negative regulation of MAPK cascade GO:0008138F:protein tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005737C:cytoplasm |
Signal Transduction
|
|
SRR924334_primary_scf7180002196937_1-4749
Len: 4,748 bp
Hits: 20
E-val: 1.10E-287
Sim: 55.17%
|
BAC82611.1pol-like protein |
GO:0006260P:DNA replication GO:0006278P:RNA-templated DNA biosynthetic process GO:0071897P:DNA biosynthetic process GO:0000166F:nucleotide binding GO:0003676F:nucleic acid binding GO:0003677F:DNA binding GO:0003824F:catalytic activity GO:0003887F:DNA-directed DNA polymerase activity GO:0003964F:RNA-directed DNA polymerase activity GO:0008270F:zinc ion binding |
DNA Metabolism
|
|
SRR924334_primary_scf7180002197282_262-708
Len: 446 bp
Hits: 20
E-val: 5.20E-54
Sim: 88.03%
|
ROK54656.1DNA transposase THAP9 |
DNA Metabolism
|
|
|
SRR924334_primary_scf7180002197282_1218-1576
Len: 358 bp
Hits: 20
E-val: 2.20E-26
Sim: 85.88%
|
ROK54656.1DNA transposase THAP9 |
GO:0007346P:regulation of mitotic cell cycle GO:0043066P:negative regulation of apoptotic process GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
|
|
SRR924334_primary_scf7180002197431_583-3104
Len: 2,521 bp
Hits: 20
E-val: 4.90E-282
Sim: 73.81%
|
RXN09401.1SCAN domain-containing 3-like isoform X2 |
GO:0008168F:methyltransferase activity GO:0016706F:2-oxoglutarate-dependent dioxygenase activity GO:0016020C:membrane |
Other
|
|
SRR924334_primary_scf7180002197439_878-2481
Len: 1,603 bp
Hits: 20
E-val: 1.90E-58
Sim: 60.22%
|
XP_018935619.1 interleukin-1 beta-like |
GO:0050794P:regulation of cellular process GO:0050896P:response to stimulus GO:0110165C:cellular anatomical structure |
Other
|
|
SRR924334_primary_scf7180002197596_256-1098
Len: 842 bp
Hits: 20
E-val: 8.00E-88
Sim: 72.13%
|
RXN31220.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2 |
DNA Metabolism
|
|
|
SRR924334_primary_scf7180002197745_1-957
Len: 956 bp
Hits: 20
E-val: 2.00E-164
Sim: 95.5%
|
XP_026075420.1protocadherin beta-16-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
|
|
SRR924334_primary_scf7180002198363_1344-1985
Len: 641 bp
Hits: 20
E-val: 5.90E-75
Sim: 95.07%
|
XP_018981204.1 L-selectin-like |
Other
|
|
|
SRR924334_primary_scf7180002198400_1-1003
Len: 1,002 bp
Hits: 20
E-val: 3.10E-30
Sim: 85.27%
|
XP_016376391.1 protein-glutamine gamma-glutamyltransferase K-like |
GO:0007399P:nervous system development GO:0031424P:keratinization GO:0003810F:protein-glutamine gamma-glutamyltransferase activity GO:0016020C:membrane |
Other
|
|
SRR924334_primary_scf7180002198462_146-763
Len: 617 bp
Hits: 20
E-val: 3.60E-45
Sim: 92.89%
|
XP_016329850.1 histone H1-like |
GO:0006334P:nucleosome assembly GO:0042981P:regulation of apoptotic process GO:0003677F:DNA binding GO:0030527F:structural constituent of chromatin GO:0000786C:nucleosome GO:0005634C:nucleus |
DNA Metabolism
|
|
SRR924334_primary_scf7180002198793_250-1143
Len: 893 bp
Hits: 20
E-val: 1.10E-98
Sim: 70.48%
|
RXN12187.1LINE-1 type transposase domain-containing 1 |
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
Other
|
|
SRR924334_primary_scf7180002198834_74-988
Len: 914 bp
Hits: 20
E-val: 2.20E-160
Sim: 99.37%
|
XP_026135796.1protocadherin alpha-C2-like |
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
Other
|
|
SRR924334_primary_scf7180002198844_1-1364
Len: 1,363 bp
Hits: 20
E-val: 2.00E-88
Sim: 53.91%
|
XP_016344152.1 Bloom syndrome protein homolog isoform X1 |
Metabolism
|
|
|
SRR924334_primary_scf7180002199058_1-1462
Len: 1,461 bp
Hits: 20
E-val: 6.40E-101
Sim: 65.04%
|
XP_026110108.1polymeric immunoglobulin receptor-like |
GO:0004888F:transmembrane signaling receptor activity GO:0005886C:plasma membrane GO:0016020C:membrane |
Cell Signaling
|
|
SRR924334_primary_scf7180002199088_203-1440
Len: 1,237 bp
Hits: 20
E-val: 2.90E-17
Sim: 78.84%
|
XP_026101295.1protein phosphatase 1K, mitochondrial-like |
GO:1902531P:regulation of intracellular signal transduction GO:0004722F:protein serine/threonine phosphatase activity GO:0046872F:metal ion binding GO:0005739C:mitochondrion |
Other
|
|
SRR924334_primary_scf7180002199478_17-1042
Len: 1,025 bp
Hits: 20
E-val: 2.00E-69
Sim: 94.54%
|
XP_018980865.1 LOW QUALITY PROTEIN: dystonin-like |
GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0005509F:calcium ion binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005882C:intermediate filament GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042995C:cell projection |
Other
|
|
SRR924334_primary_scf7180002199923_1-1183
Len: 1,182 bp
Hits: 20
E-val: 6.50E-35
Sim: 90.65%
|
XP_026075692.1transmembrane protease serine 9-like |
Protein Degradation
|
|
|
SRR924334_primary_scf7180002201354_603-1727
Len: 1,124 bp
Hits: 20
E-val: 3.30E-57
Sim: 69.47%
|
XP_018941676.1 microfibril-associated glycoprotein 4-like |
GO:0048251P:elastic fiber assembly GO:0005615C:extracellular space |
Other
|
|
SRR924334_primary_scf7180002201636_1-932
Len: 931 bp
Hits: 20
E-val: 6.70E-19
Sim: 98.93%
|
XP_018929669.1 arginyl aminopeptidase-like 1 |
Protein Degradation
|