Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924338_primary_scf7180002461362_1-903
Len: 902 bp
Hits: 20
E-val: 7.90E-25
Sim: 97.33%
|
XP_016129836.1 protein sidekick-1-like |
GO:0007411P:axon guidance GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
Other
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SRR924338_primary_scf7180002461458_1-1916
Len: 1,915 bp
Hits: 20
E-val: 8.50E-45
Sim: 93.36%
|
XP_026067846.1spectrin beta chain, non-erythrocytic 1-like isoform X3 |
GO:0051693P:actin filament capping GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0005543F:phospholipid binding GO:0008091C:spectrin GO:0016020C:membrane |
Other
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SRR924338_primary_scf7180002461485_1449-1902
Len: 453 bp
Hits: 20
E-val: 1.60E-58
Sim: 100%
|
XP_026113063.1myosin-10 isoform X1 |
GO:0000281P:mitotic cytokinesis GO:0008360P:regulation of cell shape GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
Immune Response
|
|
SRR924338_primary_scf7180002461567_817-2384
Len: 1,567 bp
Hits: 20
E-val: 2.80E-171
Sim: 98.87%
|
XP_026132932.1early growth response protein 2b-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021575P:hindbrain morphogenesis GO:0021654P:rhombomere boundary formation GO:0048568P:embryonic organ development GO:0048932P:myelination of posterior lateral line nerve axons GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002461688_1-1797
Len: 1,796 bp
Hits: 20
E-val: 1.70E-34
Sim: 88.29%
|
RXN19130.1POC1 centriolar -like protein |
GO:0001895P:retina homeostasis GO:0003014P:renal system process GO:0007099P:centriole replication GO:0007507P:heart development GO:0007634P:optokinetic behavior GO:0010842P:retina layer formation GO:0060271P:cilium assembly GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0005576C:extracellular region GO:0005737C:cytoplasm GO:0005814C:centriole GO:0036064C:ciliary basal body |
Other
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SRR924338_primary_scf7180002461765_223-1944
Len: 1,721 bp
Hits: 20
E-val: 1.90E-245
Sim: 81.41%
|
XP_016343593.1 serine/threonine-protein kinase TAO2-like isoform X1 |
GO:0030901P:midbrain development GO:0032874P:positive regulation of stress-activated MAPK cascade GO:0046330P:positive regulation of JNK cascade GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016020C:membrane |
Signal Transduction
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|
SRR924338_primary_scf7180002461782_1-894
Len: 893 bp
Hits: 20
E-val: 6.70E-93
Sim: 99.61%
|
XP_018947141.1 vang-like protein 2 |
GO:0000132P:establishment of mitotic spindle orientation GO:0001736P:establishment of planar polarity GO:0001839P:neural plate morphogenesis GO:0001841P:neural tube formation GO:0007015P:actin filament organization GO:0014812P:muscle cell migration GO:0021535P:cell migration in hindbrain GO:0030198P:extracellular matrix organization GO:0033564P:anterior/posterior axon guidance GO:0035844P:cloaca development GO:0035845P:photoreceptor cell outer segment organization GO:0036342P:post-anal tail morphogenesis GO:0045813P:positive regulation of Wnt signaling pathway, calcium modulating pathway GO:0048048P:embryonic eye morphogenesis GO:0048570P:notochord morphogenesis GO:0048840P:otolith development GO:0048884P:neuromast development GO:0055002P:striated muscle cell development GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0060071P:Wnt signaling pathway, planar cell polarity pathway GO:0060271P:cilium assembly GO:0060971P:embryonic heart tube left/right pattern formation GO:0071679P:commissural neuron axon guidance GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0097475P:motor neuron migration GO:0005515F:protein binding GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002461784_1-245
Len: 244 bp
Hits: 20
E-val: 8.70E-19
Sim: 97.26%
|
RXN17002.1NEDD8-conjugating enzyme Ubc12 |
GO:0045116P:protein neddylation GO:0005524F:ATP binding GO:0019788F:NEDD8 transferase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Other
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|
SRR924338_primary_scf7180002461920_1-1073
Len: 1,072 bp
Hits: 20
E-val: 1.30E-53
Sim: 91.61%
|
XP_016141217.1 chemokine-like receptor 1 |
GO:0002283P:neutrophil activation involved in immune response GO:0002430P:complement receptor mediated signaling pathway GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0004875F:complement receptor activity GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
|
|
SRR924338_primary_scf7180002461963_1-1355
Len: 1,354 bp
Hits: 20
E-val: 1.40E-121
Sim: 60.68%
|
XP_016331387.1 gamma-tubulin complex component 6 |
GO:0000278P:mitotic cell cycle GO:0007020P:microtubule nucleation GO:0023052P:signaling GO:0031122P:cytoplasmic microtubule organization GO:0051225P:spindle assembly GO:0051321P:meiotic cell cycle GO:0043015F:gamma-tubulin binding GO:0051011F:microtubule minus-end binding GO:0000922C:spindle pole GO:0000930C:gamma-tubulin complex GO:0005813C:centrosome GO:0005874C:microtubule GO:0010008C:endosome membrane |
Cell Signaling
|
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SRR924338_primary_scf7180002462082_20-1801
Len: 1,781 bp
Hits: 20
E-val: 5.10E-302
Sim: 84.45%
|
XP_018970088.1 zinc finger protein 644-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0040029P:epigenetic regulation of gene expression GO:0060219P:camera-type eye photoreceptor cell differentiation GO:0070050P:neuron cellular homeostasis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
|
|
SRR924338_primary_scf7180002462088_1-1193
Len: 1,192 bp
Hits: 20
E-val: 3.60E-49
Sim: 75.5%
|
XP_026109220.1glutamate receptor-interacting protein 2-like isoform X3 |
GO:0098887P:neurotransmitter receptor transport, endosome to postsynaptic membrane GO:0005737C:cytoplasm |
Cell Signaling
|
|
SRR924338_primary_scf7180002462130_1-428
Len: 427 bp
Hits: 20
E-val: 8.80E-43
Sim: 76.87%
|
XP_026107217.1LOW QUALITY PROTEIN: rho GTPase-activating protein 32-like, partial |
GO:0007264P:small GTPase-mediated signal transduction GO:0005096F:GTPase activator activity GO:0001650C:fibrillar center GO:0005654C:nucleoplasm GO:0005794C:Golgi apparatus GO:0005938C:cell cortex GO:0015629C:actin cytoskeleton |
Other
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SRR924338_primary_scf7180002462379_319-972
Len: 653 bp
Hits: 20
E-val: 7.20E-36
Sim: 97.82%
|
XP_018929000.1 hemoglobin subunit beta-2-like |
GO:0015671P:oxygen transport GO:0042744P:hydrogen peroxide catabolic process GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005344F:oxygen carrier activity GO:0019825F:oxygen binding GO:0020037F:heme binding GO:0031720F:haptoglobin binding GO:0043177F:organic acid binding GO:0046872F:metal ion binding GO:0005833C:hemoglobin complex GO:0031838C:haptoglobin-hemoglobin complex GO:0072562C:blood microparticle |
Other
|
|
SRR924338_primary_scf7180002462473_1-1729
Len: 1,728 bp
Hits: 20
E-val: 9.80E-08
Sim: 90.38%
|
XP_016336618.1 HEAT repeat-containing protein 1 |
GO:0000462P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0045943P:positive regulation of transcription by RNA polymerase I GO:0030515F:snoRNA binding GO:0030686C:90S preribosome GO:0032040C:small-subunit processome GO:0034455C:t-UTP complex |
Transcription Regulation
|
|
SRR924338_primary_scf7180002462494_1-686
Len: 685 bp
Hits: 20
E-val: 5.40E-18
Sim: 82.58%
|
XP_026099337.1guanylate-binding protein 1-like |
Other
|
|
|
SRR924338_primary_scf7180002462627_1-1023
Len: 1,022 bp
Hits: 20
E-val: 2.20E-31
Sim: 83.1%
|
XP_018930148.1 LOW QUALITY PROTEIN: ATP-citrate synthase-like |
GO:0006085P:acetyl-CoA biosynthetic process GO:0006101P:citrate metabolic process GO:0006633P:fatty acid biosynthetic process GO:0003878F:ATP citrate synthase activity GO:0005524F:ATP binding GO:0016829F:lyase activity GO:0046872F:metal ion binding GO:0005829C:cytosol |
Metabolism
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|
SRR924338_primary_scf7180002462660_1-726
Len: 725 bp
Hits: 20
E-val: 4.10E-24
Sim: 90.05%
|
XP_016129289.1 RNA polymerase II elongation factor ELL-like |
GO:0006414P:translational elongation GO:0032968P:positive regulation of transcription elongation by RNA polymerase II GO:0042795P:snRNA transcription by RNA polymerase II GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0003746F:translation elongation factor activity GO:0008023C:transcription elongation factor complex |
Transcription Regulation
|
|
SRR924338_primary_scf7180002462671_1-1225
Len: 1,224 bp
Hits: 20
E-val: 2.40E-24
Sim: 91.04%
|
ROL40854.1Neurocan core protein |
GO:0001501P:skeletal system development GO:0002052P:positive regulation of neuroblast proliferation GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0010001P:glial cell differentiation GO:0005509F:calcium ion binding GO:0005540F:hyaluronic acid binding GO:0030246F:carbohydrate binding GO:0005615C:extracellular space GO:0045202C:synapse GO:0072534C:perineuronal net |
Other
|
|
SRR924338_primary_scf7180002462672_357-1262
Len: 905 bp
Hits: 20
E-val: 1.80E-149
Sim: 83.91%
|
XP_018920186.1 C-Jun-amino-terminal kinase-interacting protein 1-like |
GO:0046328P:regulation of JNK cascade GO:0005078F:MAP-kinase scaffold activity GO:0008432F:JUN kinase binding GO:0016301F:kinase activity GO:0005737C:cytoplasm |
Signal Transduction
|
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SRR924338_primary_scf7180002462745_1-1303
Len: 1,302 bp
Hits: 20
E-val: 1.70E-121
Sim: 82.33%
|
XP_018958349.1 F-box/LRR-repeat protein 19-like isoform X2 |
GO:0003677F:DNA binding GO:0008270F:zinc ion binding |
DNA Metabolism
|
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SRR924338_primary_scf7180002462782_1-1388
Len: 1,387 bp
Hits: 20
E-val: 1.50E-30
Sim: 96.32%
|
XP_016103592.1 5'-3' exoribonuclease 1-like |
GO:0000956P:nuclear-transcribed mRNA catabolic process GO:0016075P:rRNA catabolic process GO:0003723F:RNA binding GO:0004534F:5'-3' RNA exonuclease activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
DNA Metabolism
|
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SRR924338_primary_scf7180002462940_314-1171
Len: 857 bp
Hits: 20
E-val: 3.10E-63
Sim: 61.63%
|
RXN31287.1LINE-1 type transposase domain-containing 1 |
GO:0002088P:lens development in camera-type eye GO:0007601P:visual perception GO:0005212F:structural constituent of eye lens GO:0016020C:membrane |
Other
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SRR924338_primary_scf7180002463056_1-1214
Len: 1,213 bp
Hits: 20
E-val: 6.10E-97
Sim: 71.33%
|
XP_018962356.1 coagulation factor XIII A chain-like isoform X1 |
GO:0072378P:blood coagulation, fibrin clot formation GO:0003810F:protein-glutamine gamma-glutamyltransferase activity |
Other
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SRR924338_primary_scf7180002463091_1-534
Len: 533 bp
Hits: 20
E-val: 1.20E-49
Sim: 99.95%
|
XP_018941525.1 neurexin-1a-like, partial |
GO:0007155P:cell adhesion GO:0016020C:membrane |
Other
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