Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002473094_220-1048
Len: 828 bp
Hits: 20
E-val: 3.30E-70
Sim: 62.79%
|
XP_018930365.1 cell growth regulator with RING finger domain protein 1 |
Other
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SRR924338_primary_scf7180002473120_1-1144
Len: 1,143 bp
Hits: 20
E-val: 5.90E-211
Sim: 91.78%
|
AAP04310.1G-protein-coupled receptor GPR34 type 1 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0035589P:G protein-coupled purinergic nucleotide receptor signaling pathway GO:0045028F:G protein-coupled purinergic nucleotide receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002473191_485-1382
Len: 897 bp
Hits: 20
E-val: 1.30E-24
Sim: 92.49%
|
RXN22803.1receptor-type tyrosine- phosphatase S-like protein |
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
DNA Metabolism
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SRR924338_primary_scf7180002473206_445-843
Len: 398 bp
Hits: 20
E-val: 1.60E-75
Sim: 99.43%
|
RXN25726.1Wnt-5b isoform X2 |
GO:0001525P:angiogenesis GO:0001946P:lymphangiogenesis GO:0001958P:endochondral ossification GO:0002062P:chondrocyte differentiation GO:0002574P:thrombocyte differentiation GO:0008591P:regulation of Wnt signaling pathway, calcium modulating pathway GO:0009826P:unidimensional cell growth GO:0010172P:embryonic body morphogenesis GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0030182P:neuron differentiation GO:0031018P:endocrine pancreas development GO:0031101P:fin regeneration GO:0036342P:post-anal tail morphogenesis GO:0042692P:muscle cell differentiation GO:0045165P:cell fate commitment GO:0048703P:embryonic viscerocranium morphogenesis GO:0048840P:otolith development GO:0048884P:neuromast development GO:0051209P:release of sequestered calcium ion into cytosol GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0060070P:canonical Wnt signaling pathway GO:0060536P:cartilage morphogenesis GO:0061053P:somite development GO:0090156P:intracellular sphingolipid homeostasis GO:1904105P:positive regulation of convergent extension involved in gastrulation GO:2000052P:positive regulation of non-canonical Wnt signaling pathway GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0016020C:membrane |
Cell Signaling
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SRR924338_primary_scf7180002473273_1-949
Len: 948 bp
Hits: 20
E-val: 1.80E-59
Sim: 94.94%
|
XP_016105507.1 LOW QUALITY PROTEIN: ETS translocation variant 4-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009792P:embryo development ending in birth or egg hatching GO:0035108P:limb morphogenesis GO:0035778P:pronephric nephron tubule epithelial cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002473279_1-975
Len: 974 bp
Hits: 20
E-val: 9.40E-40
Sim: 72.17%
|
XP_018933739.1 DNA replication licensing factor MCM7 |
GO:0000727P:double-strand break repair via break-induced replication GO:0006270P:DNA replication initiation GO:0006271P:DNA strand elongation involved in DNA replication GO:1902017P:regulation of cilium assembly GO:0003697F:single-stranded DNA binding GO:0016787F:hydrolase activity GO:0017116F:single-stranded DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
DNA Metabolism
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SRR924338_primary_scf7180002473403_78-752
Len: 674 bp
Hits: 20
E-val: 6.30E-128
Sim: 98.83%
|
XP_018970624.1 potassium voltage-gated channel subfamily C member 1-like |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
Ion Transport
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SRR924338_primary_scf7180002473512_1-1051
Len: 1,050 bp
Hits: 20
E-val: 7.00E-41
Sim: 72.03%
|
XP_016324604.1 cytoskeleton-associated protein 5-like isoform X1 |
GO:0000226P:microtubule cytoskeleton organization GO:0043232C:intracellular membraneless organelle |
Other
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SRR924338_primary_scf7180002473799_1-1036
Len: 1,035 bp
Hits: 20
E-val: 3.90E-12
Sim: 92.41%
|
XP_016306952.1 RNA-binding protein 27-like isoform X1 |
Other
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SRR924338_primary_scf7180002473898_1-925
Len: 924 bp
Hits: 20
E-val: 2.10E-36
Sim: 72.6%
|
RXN16389.1UPF0668 C10orf76-like protein |
Other
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SRR924338_primary_scf7180002474001_1-1195
Len: 1,194 bp
Hits: 20
E-val: 2.10E-150
Sim: 92.37%
|
XP_018946257.1 coiled-coil domain-containing protein 92 |
GO:0008150P:biological_process GO:0003674F:molecular_function |
Other
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SRR924338_primary_scf7180002474109_1-884
Len: 883 bp
Hits: 20
E-val: 1.40E-39
Sim: 81.63%
|
XP_026061697.1retinal-specific ATP-binding cassette transporter-like |
GO:0015914P:phospholipid transport GO:0034204P:lipid translocation GO:0055085P:transmembrane transport GO:0005524F:ATP binding GO:0005548F:phospholipid transporter activity GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
Membrane Transport
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SRR924338_primary_scf7180002474140_1-560
Len: 559 bp
Hits: 20
E-val: 3.60E-44
Sim: 97.47%
|
RXN04985.1ras-specific guanine nucleotide-releasing factor 2-like isoform X2 |
GO:0007265P:Ras protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane |
Other
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SRR924338_primary_scf7180002474166_469-813
Len: 344 bp
Hits: 20
E-val: 6.90E-38
Sim: 94.32%
|
RXN23130.1voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1 |
GO:0098703P:calcium ion import across plasma membrane GO:0008331F:high voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex |
Ion Transport
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SRR924338_primary_scf7180002474388_107-644
Len: 537 bp
Hits: 20
E-val: 6.90E-61
Sim: 85.93%
|
XP_018976465.1 myelin transcription factor 1-like protein |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002474525_1-460
Len: 459 bp
Hits: 16
E-val: 1.40E-30
Sim: 90.69%
|
XP_018932298.1 nestin-like |
GO:0007420P:brain development GO:0021545P:cranial nerve development GO:0030844P:positive regulation of intermediate filament depolymerization GO:0031076P:embryonic camera-type eye development GO:0043066P:negative regulation of apoptotic process GO:2000179P:positive regulation of neural precursor cell proliferation GO:0019215F:intermediate filament binding GO:0031730F:CCR5 chemokine receptor binding GO:0005882C:intermediate filament |
Cell Signaling
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SRR924338_primary_scf7180002474624_925-1152
Len: 227 bp
Hits: 20
E-val: 1.30E-32
Sim: 98.73%
|
XP_026060400.1UPF0472 protein C16orf72 homolog |
GO:0071466P:cellular response to xenobiotic stimulus GO:0080135P:regulation of cellular response to stress GO:1901797P:negative regulation of signal transduction by p53 class mediator GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR924338_primary_scf7180002474757_334-900
Len: 566 bp
Hits: 20
E-val: 1.30E-57
Sim: 66.4%
|
XP_018972772.1 matrix metalloproteinase-9-like |
GO:0002633P:positive regulation of granuloma formation GO:0003417P:growth plate cartilage development GO:0008152P:metabolic process GO:0009617P:response to bacterium GO:0030199P:collagen fibril organization GO:0030511P:positive regulation of transforming growth factor beta receptor signaling pathway GO:0031101P:fin regeneration GO:0033334P:fin morphogenesis GO:0035701P:hematopoietic stem cell migration GO:0042060P:wound healing GO:0060429P:epithelium development GO:0090594P:inflammatory response to wounding GO:0008237F:metallopeptidase activity GO:0046872F:metal ion binding GO:0005576C:extracellular region |
Cell Signaling
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SRR924338_primary_scf7180002475605_1-1105
Len: 1,104 bp
Hits: 20
E-val: 6.40E-37
Sim: 77.78%
|
XP_026092614.1E3 ubiquitin-protein ligase HUWE1-like isoform X2 |
GO:0006284P:base-excision repair GO:0006511P:ubiquitin-dependent protein catabolic process GO:0007030P:Golgi organization GO:0016567P:protein ubiquitination GO:0061025P:membrane fusion GO:0061630F:ubiquitin protein ligase activity GO:0000139C:Golgi membrane GO:0005634C:nucleus |
DNA Metabolism
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SRR924338_primary_scf7180002476317_193-891
Len: 698 bp
Hits: 20
E-val: 6.30E-123
Sim: 95.58%
|
XP_018927168.1 paralemmin-2-like |
Signal Transduction
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SRR924338_primary_scf7180002476497_1-761
Len: 760 bp
Hits: 20
E-val: 7.10E-27
Sim: 97.52%
|
XP_018978261.1 GPI transamidase component PIG-S-like |
GO:0006506P:GPI anchor biosynthetic process GO:0016255P:attachment of GPI anchor to protein GO:0042765C:GPI-anchor transamidase complex |
Other
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SRR924338_primary_scf7180002476906_1-674
Len: 673 bp
Hits: 20
E-val: 8.80E-21
Sim: 98.51%
|
XP_026051838.1calcium-binding protein 8-like isoform X1 |
GO:0005509F:calcium ion binding GO:0005886C:plasma membrane GO:0032588C:trans-Golgi network membrane GO:0048471C:perinuclear region of cytoplasm |
Other
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SRR924338_primary_scf7180002477201_1-1069
Len: 1,068 bp
Hits: 20
E-val: 1.20E-24
Sim: 95.63%
|
XP_016305094.1 discs large homolog 1-like protein isoform X6 |
GO:0007268P:chemical synaptic transmission GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0097120P:receptor localization to synapse GO:0098609P:cell-cell adhesion GO:0099072P:regulation of postsynaptic membrane neurotransmitter receptor levels GO:0019901F:protein kinase binding GO:0035255F:ionotropic glutamate receptor binding GO:0005789C:endoplasmic reticulum membrane GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane GO:0031594C:neuromuscular junction GO:0043005C:neuron projection GO:0070161C:anchoring junction GO:0098839C:postsynaptic density membrane |
Signal Transduction
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SRR924338_primary_scf7180002477401_368-868
Len: 500 bp
Hits: 20
E-val: 1.60E-59
Sim: 76.55%
|
XP_018967621.1 DNA-binding protein inhibitor ID-1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032922P:circadian regulation of gene expression GO:0045664P:regulation of neuron differentiation GO:0050768P:negative regulation of neurogenesis GO:0003677F:DNA binding GO:0003714F:transcription corepressor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002478151_1-690
Len: 689 bp
Hits: 20
E-val: 1.40E-45
Sim: 58.81%
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XP_026102901.1ribosome biogenesis protein BMS1 homolog |
GO:0000462P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000479P:endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0042254P:ribosome biogenesis GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0034511F:U3 snoRNA binding GO:0005634C:nucleus GO:0005730C:nucleolus GO:0030686C:90S preribosome |
Other
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