Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002487977_328-843
Len: 515 bp
Hits: 20
E-val: 2.90E-48
Sim: 85.91%
|
XP_016353364.1 WD repeat-containing protein 26-like |
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0034657C:GID complex |
Other
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SRR924338_primary_scf7180002488167_1-630
Len: 629 bp
Hits: 20
E-val: 7.10E-33
Sim: 100%
|
XP_026064074.1serine/threonine-protein phosphatase alpha-2 isoform |
GO:0005977P:glycogen metabolic process GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0051301P:cell division GO:0060026P:convergent extension GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002488293_1-677
Len: 676 bp
Hits: 20
E-val: 3.50E-25
Sim: 98.27%
|
XP_026098282.1GATA-binding factor 2-like isoform X3 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003190P:atrioventricular valve formation GO:0021514P:ventral spinal cord interneuron differentiation GO:0035912P:dorsal aorta morphogenesis GO:0045165P:cell fate commitment GO:0045766P:positive regulation of angiogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048821P:erythrocyte development GO:0060215P:primitive hemopoiesis GO:1902895P:positive regulation of miRNA transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002488358_1-1234
Len: 1,233 bp
Hits: 20
E-val: 5.80E-212
Sim: 94.71%
|
XP_018974248.1 RNA-binding protein MEX3B-like |
GO:0003723F:RNA binding GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002488361_1-1129
Len: 1,128 bp
Hits: 20
E-val: 1.50E-41
Sim: 95.31%
|
RXN39038.1protocadherin Fat 3-like protein |
GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0031175P:neuron projection development GO:0060536P:cartilage morphogenesis GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0016342C:catenin complex |
Other
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SRR924338_primary_scf7180002488447_1-980
Len: 979 bp
Hits: 20
E-val: 4.40E-21
Sim: 97.42%
|
XP_016085976.1 fibronectin-like |
GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007160P:cell-matrix adhesion GO:0007399P:nervous system development GO:0007507P:heart development GO:0008360P:regulation of cell shape GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005615C:extracellular space |
Other
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SRR924338_primary_scf7180002488528_1-832
Len: 831 bp
Hits: 20
E-val: 1.40E-132
Sim: 62.93%
|
XP_018948874.1 protein phosphatase 1 regulatory subunit 3D-like |
GO:0005979P:regulation of glycogen biosynthetic process GO:0008157F:protein phosphatase 1 binding GO:2001069F:glycogen binding GO:0000164C:protein phosphatase type 1 complex |
Other
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SRR924338_primary_scf7180002488533_259-1209
Len: 950 bp
Hits: 20
E-val: 4.80E-174
Sim: 94%
|
XP_018970048.1 PWWP domain-containing protein 2B-like isoform X1 |
DNA Metabolism
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SRR924338_primary_scf7180002488568_1-1269
Len: 1,268 bp
Hits: 20
E-val: 9.00E-51
Sim: 87.63%
|
XP_018970232.1 inactive tyrosine-protein kinase 7-like |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0070593P:dendrite self-avoidance GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008046F:axon guidance receptor activity GO:0046872F:metal ion binding GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Signal Transduction
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SRR924338_primary_scf7180002488703_1-1728
Len: 1,727 bp
Hits: 20
E-val: 1.30E-28
Sim: 93.58%
|
XP_018922537.1 lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma-like isoform X3 |
GO:0006508P:proteolysis GO:0006520P:amino acid metabolic process GO:0043604P:amide biosynthetic process GO:0043605P:amide catabolic process GO:0003677F:DNA binding GO:0004180F:carboxypeptidase activity GO:0016811F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides GO:0046872F:metal ion binding GO:0005635C:nuclear envelope GO:0016020C:membrane |
Protein Degradation
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SRR924338_primary_scf7180002488742_1-854
Len: 853 bp
Hits: 20
E-val: 1.40E-36
Sim: 97.73%
|
XP_018940185.1 LOW QUALITY PROTEIN: neogenin-like |
GO:0001756P:somitogenesis GO:0001764P:neuron migration GO:0001841P:neural tube formation GO:0007411P:axon guidance GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface |
Other
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SRR924338_primary_scf7180002488774_21-445
Len: 424 bp
Hits: 20
E-val: 3.40E-18
Sim: 96.8%
|
RXN18228.1wee1 kinase 2 isoform X1 |
GO:0000278P:mitotic cell cycle GO:0060631P:regulation of meiosis I GO:0000287F:magnesium ion binding GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002488842_1-1071
Len: 1,070 bp
Hits: 20
E-val: 7.80E-64
Sim: 54.49%
|
AWP09796.1putative pre-mRNA-processing factor 6 |
GO:0000244P:spliceosomal tri-snRNP complex assembly GO:0000398P:mRNA splicing, via spliceosome GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0005634C:nucleus GO:0046540C:U4/U6 x U5 tri-snRNP complex GO:0071013C:catalytic step 2 spliceosome |
Other
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SRR924338_primary_scf7180002488986_235-1179
Len: 944 bp
Hits: 20
E-val: 1.00E-54
Sim: 96.77%
|
XP_018950851.1 cysteine-rich motor neuron 1 protein-like |
GO:0001558P:regulation of cell growth GO:0001568P:blood vessel development GO:0001756P:somitogenesis GO:0009966P:regulation of signal transduction GO:0048570P:notochord morphogenesis GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005520F:insulin-like growth factor binding GO:0005576C:extracellular region GO:0005886C:plasma membrane |
Protein Degradation
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SRR924338_primary_scf7180002488995_117-909
Len: 792 bp
Hits: 20
E-val: 3.80E-23
Sim: 68.65%
|
XP_016136617.1 monocarboxylate transporter 5-like |
GO:0015718P:monocarboxylic acid transport GO:0043066P:negative regulation of apoptotic process GO:0055085P:transmembrane transport GO:0008028F:monocarboxylic acid transmembrane transporter activity GO:0071986C:Ragulator complex |
Membrane Transport
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SRR924338_primary_scf7180002489041_1-482
Len: 481 bp
Hits: 20
E-val: 1.60E-85
Sim: 96.36%
|
XP_018969534.1 LOW QUALITY PROTEIN: cytochrome P450 1B1-like |
GO:0001654P:eye development GO:0042446P:hormone biosynthetic process GO:0042448P:progesterone metabolic process GO:0004508F:steroid 17-alpha-monooxygenase activity GO:0005506F:iron ion binding GO:0020037F:heme binding GO:0070330F:aromatase activity GO:0005789C:endoplasmic reticulum membrane |
Metabolism
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SRR924338_primary_scf7180002489102_139-801
Len: 662 bp
Hits: 20
E-val: 7.50E-33
Sim: 98.84%
|
ROL51285.1Cytoplasmic dynein 1 heavy chain 1 |
GO:0007018P:microtubule-based movement GO:0022010P:central nervous system myelination GO:0050865P:regulation of cell activation GO:0060219P:camera-type eye photoreceptor cell differentiation GO:0070507P:regulation of microtubule cytoskeleton organization GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005858C:axonemal dynein complex GO:0005874C:microtubule |
Cell Signaling
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SRR924338_primary_scf7180002489143_1-1636
Len: 1,635 bp
Hits: 20
E-val: 2.90E-33
Sim: 96.19%
|
XP_018944224.1 phosphoglucomutase-1-like, partial |
GO:0006006P:glucose metabolic process GO:0033499P:galactose catabolic process via UDP-galactose, Leloir pathway GO:0000287F:magnesium ion binding GO:0004614F:phosphoglucomutase activity GO:0005829C:cytosol |
Metabolism
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SRR924338_primary_scf7180002489240_1-447
Len: 446 bp
Hits: 20
E-val: 8.40E-12
Sim: 98.55%
|
ROL48660.1HEPACAM family member 2 |
GO:0015031P:protein transport GO:0032456P:endocytic recycling GO:0042147P:retrograde transport, endosome to Golgi GO:0000149F:SNARE binding GO:0005829C:cytosol GO:0016020C:membrane GO:1990745C:EARP complex |
Other
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SRR924338_primary_scf7180002489331_1-1077
Len: 1,076 bp
Hits: 20
E-val: 3.50E-96
Sim: 87.39%
|
XP_016117803.1 collagen alpha-1(XXI) chain-like |
GO:0007155P:cell adhesion GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
Other
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SRR924338_primary_scf7180002489416_1-1534
Len: 1,533 bp
Hits: 20
E-val: 6.40E-27
Sim: 99.13%
|
XP_018977650.1 cadherin-13-like, partial |
GO:0000902P:cell morphogenesis GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0016342C:catenin complex GO:0098552C:side of membrane |
Other
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SRR924338_primary_scf7180002489737_1-1405
Len: 1,404 bp
Hits: 20
E-val: 3.60E-16
Sim: 92.16%
|
RXN28930.1putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform X3 |
GO:0006508P:proteolysis GO:0016477P:cell migration GO:0016579P:protein deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
Protein Degradation
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SRR924338_primary_scf7180002489740_1-1294
Len: 1,293 bp
Hits: 20
E-val: 2.30E-25
Sim: 97.15%
|
XP_026070070.1kalirin-like isoform X2 |
GO:0007411P:axon guidance GO:0030097P:hemopoiesis GO:0035556P:intracellular signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0014069C:postsynaptic density GO:0019898C:extrinsic component of membrane |
Signal Transduction
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SRR924338_primary_scf7180002490246_1-1307
Len: 1,306 bp
Hits: 20
E-val: 1.80E-33
Sim: 94.35%
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XP_018923056.1 tax1-binding protein 1 homolog B isoform X3 |
GO:0006915P:apoptotic process GO:0008270F:zinc ion binding |
Other
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SRR924338_primary_scf7180002490350_1-927
Len: 926 bp
Hits: 20
E-val: 1.70E-43
Sim: 63.56%
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XP_016141259.1 LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 7-like |
GO:0001501P:skeletal system development GO:0001503P:ossification GO:0002027P:regulation of heart rate GO:0003014P:renal system process GO:0006582P:melanin metabolic process GO:0006816P:calcium ion transport GO:0007346P:regulation of mitotic cell cycle GO:0010960P:magnesium ion homeostasis GO:0030318P:melanocyte differentiation GO:0031017P:exocrine pancreas development GO:0046928P:regulation of neurotransmitter secretion GO:0050678P:regulation of epithelial cell proliferation GO:0098655P:monoatomic cation transmembrane transport GO:0004674F:protein serine/threonine kinase activity GO:0005216F:monoatomic ion channel activity GO:0140996F:histone H3 kinase activity GO:0005886C:plasma membrane |
Signal Transduction
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