Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002494441_1-842
Len: 841 bp
Hits: 20
E-val: 1.60E-19
Sim: 95.51%
|
XP_017537987.1 myelin transcription factor 1-like protein isoform X5 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002494728_1-773
Len: 772 bp
Hits: 20
E-val: 1.10E-32
Sim: 99.78%
|
XP_026143131.1inositol 1,4,5-trisphosphate receptor type 2 |
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
Cell Signaling
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SRR924338_primary_scf7180002494968_1-685
Len: 684 bp
Hits: 20
E-val: 2.30E-53
Sim: 76.26%
|
XP_018981435.1 DNA damage-binding protein 1-like |
GO:0006281P:DNA repair GO:0010564P:regulation of cell cycle process GO:0043066P:negative regulation of apoptotic process GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0035861C:site of double-strand break |
DNA Metabolism
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SRR924338_primary_scf7180002495140_1-977
Len: 976 bp
Hits: 20
E-val: 1.60E-10
Sim: 90.08%
|
CAG06116.1unnamed protein product |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002495641_1-759
Len: 758 bp
Hits: 20
E-val: 1.10E-16
Sim: 87.94%
|
CAG11289.1unnamed protein product, partial |
GO:0006338P:chromatin remodeling GO:0016567P:protein ubiquitination GO:0030331F:nuclear estrogen receptor binding GO:0031072F:heat shock protein binding GO:0051082F:unfolded protein binding GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0080008C:Cul4-RING E3 ubiquitin ligase complex |
Signal Transduction
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SRR924338_primary_scf7180002495654_1-696
Len: 695 bp
Hits: 20
E-val: 1.30E-19
Sim: 80.55%
|
XP_018918616.1 neuroendocrine convertase 1-like isoform X1 |
GO:0016486P:peptide hormone processing GO:0004252F:serine-type endopeptidase activity GO:0005615C:extracellular space GO:0016020C:membrane GO:0030133C:transport vesicle GO:0043005C:neuron projection |
Protein Degradation
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SRR924338_primary_scf7180002496168_292-1224
Len: 932 bp
Hits: 12
E-val: 1.10E-21
Sim: 95.13%
|
XP_018968295.1 neurobeachin-like |
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
Signal Transduction
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SRR924338_primary_scf7180002496654_1-773
Len: 772 bp
Hits: 20
E-val: 2.70E-135
Sim: 92.19%
|
XP_016098315.1 dual specificity protein phosphatase 10-like |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0006360P:transcription by RNA polymerase I GO:0046329P:negative regulation of JNK cascade GO:0008330F:protein tyrosine/threonine phosphatase activity GO:0017017F:MAP kinase tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0033550F:MAP kinase tyrosine phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0000120C:RNA polymerase I transcription regulator complex GO:0005829C:cytosol |
Signal Transduction
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SRR924338_primary_scf7180002496729_1-1287
Len: 1,286 bp
Hits: 20
E-val: 2.40E-168
Sim: 93.77%
|
XP_018949202.1 E3 ubiquitin-protein ligase ZFP91-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002496764_1-554
Len: 553 bp
Hits: 20
E-val: 3.70E-25
Sim: 98.9%
|
XP_026146201.1DNA (cytosine-5)-methyltransferase 3A-like isoform X1 |
GO:0032259P:methylation GO:0045892P:negative regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002497200_1-1078
Len: 1,077 bp
Hits: 20
E-val: 5.00E-18
Sim: 98.17%
|
XP_026122941.1dual specificity testis-specific protein kinase 2-like |
GO:0051496P:positive regulation of stress fiber assembly GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002498914_1-926
Len: 925 bp
Hits: 20
E-val: 2.30E-19
Sim: 96.83%
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XP_026069906.1glycerol-3-phosphate dehydrogenase, mitochondrial-like isoform X2 |
GO:0006072P:glycerol-3-phosphate metabolic process GO:0004368F:glycerol-3-phosphate dehydrogenase (quinone) activity GO:0005509F:calcium ion binding GO:0005739C:mitochondrion |
Metabolism
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SRR924338_primary_scf7180002499152_1-1120
Len: 1,119 bp
Hits: 20
E-val: 4.90E-24
Sim: 68.85%
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XP_016339996.1 golgin subfamily A member 2 |
GO:0001966P:thigmotaxis GO:0007420P:brain development GO:0007519P:skeletal muscle tissue development GO:0009987P:cellular process GO:0005856C:cytoskeleton GO:0031090C:organelle membrane GO:0031985C:Golgi cisterna |
Other
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SRR924338_primary_scf7180002499572_391-1073
Len: 682 bp
Hits: 20
E-val: 7.30E-23
Sim: 100%
|
XP_026130908.1period circadian protein homolog 3-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0000976F:transcription cis-regulatory region binding GO:0001222F:transcription corepressor binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002499891_1-404
Len: 403 bp
Hits: 12
E-val: 3.60E-22
Sim: 92.89%
|
XP_018978437.1 C-type lectin domain family 4 member E-like |
GO:0030246F:carbohydrate binding GO:0005886C:plasma membrane |
Other
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SRR924338_primary_scf7180002500442_1-728
Len: 727 bp
Hits: 20
E-val: 7.70E-31
Sim: 68.85%
|
XP_018967242.1 protein PRRC1 |
GO:0001757P:somite specification GO:0010669P:epithelial structure maintenance GO:0034237F:protein kinase A regulatory subunit binding GO:0005794C:Golgi apparatus |
Signal Transduction
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SRR924338_primary_scf7180002500605_1-1125
Len: 1,124 bp
Hits: 20
E-val: 1.20E-19
Sim: 89.35%
|
XP_018922030.1 LOW QUALITY PROTEIN: laminin subunit alpha-5-like |
GO:0007411P:axon guidance GO:0008104P:intracellular protein localization GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0030155P:regulation of cell adhesion GO:0030334P:regulation of cell migration GO:0035138P:pectoral fin morphogenesis GO:0035141P:medial fin morphogenesis GO:0045892P:negative regulation of DNA-templated transcription GO:0045995P:regulation of embryonic development GO:0098609P:cell-cell adhesion GO:0003714F:transcription corepressor activity GO:0005102F:signaling receptor binding GO:0005201F:extracellular matrix structural constituent GO:0008017F:microtubule binding GO:0008270F:zinc ion binding GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005874C:microtubule |
Cell Signaling
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SRR924338_primary_scf7180002502135_1-1041
Len: 1,040 bp
Hits: 20
E-val: 1.20E-29
Sim: 91.2%
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XP_026055953.1nuclear receptor subfamily 1 group D member 1-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030154P:cell differentiation GO:0030522P:intracellular receptor signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Cell Signaling
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SRR924338_primary_scf7180002516870_1-408
Len: 407 bp
Hits: 20
E-val: 6.20E-62
Sim: 89.43%
|
XP_018965191.1 homeobox protein EMX1-like |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021537P:telencephalon development GO:0021862P:early neuron differentiation in forebrain GO:0021952P:central nervous system projection neuron axonogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
Transcription Regulation
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SRR924338_primary_scf7180002517003_1-2486
Len: 2,485 bp
Hits: 20
E-val: 1.00E-26
Sim: 96.83%
|
XP_016136135.1 RNA 3'-terminal phosphate cyclase-like protein |
GO:0000479P:endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0004521F:RNA endonuclease activity GO:0005730C:nucleolus |
DNA Metabolism
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SRR924338_primary_scf7180002517133_33-1839
Len: 1,806 bp
Hits: 20
E-val: 2.10E-40
Sim: 72.79%
|
XP_016107682.1 E3 ubiquitin-protein ligase TRIP12 |
GO:0000209P:protein polyubiquitination GO:0033696P:heterochromatin boundary formation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0045995P:regulation of embryonic development GO:0140861P:DNA repair-dependent chromatin remodeling GO:0061630F:ubiquitin protein ligase activity GO:0016607C:nuclear speck |
DNA Metabolism
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SRR924338_primary_scf7180002517151_1-1944
Len: 1,943 bp
Hits: 20
E-val: 2.60E-118
Sim: 53.85%
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XP_018927209.1 LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 4-like |
GO:0006685P:sphingomyelin catabolic process GO:0046475P:glycerophospholipid catabolic process GO:0046513P:ceramide biosynthetic process GO:0050290F:sphingomyelin phosphodiesterase D activity GO:0016020C:membrane |
Other
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SRR924338_primary_scf7180002517156_1-2820
Len: 2,819 bp
Hits: 20
E-val: 0
Sim: 94.6%
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XP_018924755.1 deubiquitinating protein VCIP135-like |
GO:0016320P:endoplasmic reticulum membrane fusion GO:0016567P:protein ubiquitination GO:0035871P:protein K11-linked deubiquitination GO:0071108P:protein K48-linked deubiquitination GO:0090168P:Golgi reassembly GO:0106300P:protein-DNA covalent cross-linking repair GO:1904888P:cranial skeletal system development GO:0004843F:cysteine-type deubiquitinase activity |
DNA Metabolism
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SRR924338_primary_scf7180002517162_1-1478
Len: 1,477 bp
Hits: 20
E-val: 6.00E-232
Sim: 95.35%
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XP_018973512.1 zinc finger protein ZFAT-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002517232_4-1690
Len: 1,686 bp
Hits: 20
E-val: 1.40E-14
Sim: 75.45%
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XP_016100895.1 programmed cell death protein 10-A-like |
GO:0003007P:heart morphogenesis GO:0043009P:chordate embryonic development GO:0048514P:blood vessel morphogenesis GO:0090168P:Golgi reassembly GO:0019901F:protein kinase binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0090443C:FAR/SIN/STRIPAK complex |
Signal Transduction
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