Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002517327_1-2413
Len: 2,412 bp
Hits: 20
E-val: 5.70E-38
Sim: 96.12%
|
XP_018952544.1 catenin alpha-1-like |
GO:0001541P:ovarian follicle development GO:0001894P:tissue homeostasis GO:0007163P:establishment or maintenance of cell polarity GO:0007406P:negative regulation of neuroblast proliferation GO:0008584P:male gonad development GO:0016264P:gap junction assembly GO:0016477P:cell migration GO:0031103P:axon regeneration GO:0034334P:adherens junction maintenance GO:0042475P:odontogenesis of dentin-containing tooth GO:0043009P:chordate embryonic development GO:0043297P:apical junction assembly GO:0043627P:response to estrogen GO:0045880P:positive regulation of smoothened signaling pathway GO:0071681P:cellular response to indole-3-methanol GO:0090136P:epithelial cell-cell adhesion GO:1900181P:negative regulation of protein localization to nucleus GO:2000146P:negative regulation of cell motility GO:2001045P:negative regulation of integrin-mediated signaling pathway GO:2001240P:negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:2001241P:positive regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:0005198F:structural molecule activity GO:0008013F:beta-catenin binding GO:0017166F:vinculin binding GO:0042802F:identical protein binding GO:0045295F:gamma-catenin binding GO:0045296F:cadherin binding GO:0051015F:actin filament binding GO:0001669C:acrosomal vesicle GO:0005634C:nucleus GO:0005794C:Golgi apparatus GO:0005902C:microvillus GO:0005915C:zonula adherens GO:0005938C:cell cortex GO:0014704C:intercalated disc GO:0015629C:actin cytoskeleton GO:0016342C:catenin complex GO:0016600C:flotillin complex GO:0030027C:lamellipodium |
Cell Signaling
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SRR924338_primary_scf7180002517332_281-1021
Len: 740 bp
Hits: 20
E-val: 1.40E-125
Sim: 92.98%
|
XP_016130532.1 whirlin-like |
GO:0007605P:sensory perception of sound GO:0060088P:auditory receptor cell stereocilium organization GO:0001917C:photoreceptor inner segment GO:0002142C:stereocilia ankle link complex GO:0005886C:plasma membrane GO:0005929C:cilium GO:0032426C:stereocilium tip |
Cell Signaling
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SRR924338_primary_scf7180002517378_1-1491
Len: 1,490 bp
Hits: 20
E-val: 9.60E-28
Sim: 93.92%
|
XP_018926673.1 polypeptide N-acetylgalactosaminyltransferase 10-like |
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
Other
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SRR924338_primary_scf7180002517402_1-1907
Len: 1,906 bp
Hits: 20
E-val: 4.00E-111
Sim: 55.96%
|
XP_018978867.1 E3 ubiquitin-protein ligase Mdm2 isoform X1 |
GO:0010468P:regulation of gene expression GO:0016567P:protein ubiquitination GO:0043066P:negative regulation of apoptotic process GO:0051726P:regulation of cell cycle GO:0065008P:regulation of biological quality GO:0002039F:p53 binding GO:0008270F:zinc ion binding GO:0042802F:identical protein binding GO:0061630F:ubiquitin protein ligase activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0005737C:cytoplasm |
DNA Metabolism
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SRR924338_primary_scf7180002517453_1-711
Len: 710 bp
Hits: 20
E-val: 1.20E-47
Sim: 98.4%
|
RXN17338.1sonic hedgehog |
GO:0001756P:somitogenesis GO:0001839P:neural plate morphogenesis GO:0001947P:heart looping GO:0007267P:cell-cell signaling GO:0007411P:axon guidance GO:0008015P:blood circulation GO:0008285P:negative regulation of cell population proliferation GO:0009953P:dorsal/ventral pattern formation GO:0010002P:cardioblast differentiation GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0021508P:floor plate formation GO:0021520P:spinal cord motor neuron cell fate specification GO:0021984P:adenohypophysis development GO:0021986P:habenula development GO:0030510P:regulation of BMP signaling pathway GO:0030902P:hindbrain development GO:0030917P:midbrain-hindbrain boundary development GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0031018P:endocrine pancreas development GO:0031076P:embryonic camera-type eye development GO:0032835P:glomerulus development GO:0033339P:pectoral fin development GO:0035143P:caudal fin morphogenesis GO:0042462P:eye photoreceptor cell development GO:0042476P:odontogenesis GO:0042694P:muscle cell fate specification GO:0045494P:photoreceptor cell maintenance GO:0045880P:positive regulation of smoothened signaling pathway GO:0048557P:embryonic digestive tract morphogenesis GO:0048618P:post-embryonic foregut morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0048709P:oligodendrocyte differentiation GO:0048741P:skeletal muscle fiber development GO:0048793P:pronephros development GO:0048795P:swim bladder morphogenesis GO:0048839P:inner ear development GO:0060956P:endocardial cell differentiation GO:0061035P:regulation of cartilage development GO:0070444P:oligodendrocyte progenitor proliferation GO:0097264P:self proteolysis GO:1905178P:regulation of cardiac muscle tissue regeneration GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0140853F:cholesterol-protein transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002517475_1-1802
Len: 1,801 bp
Hits: 20
E-val: 3.50E-32
Sim: 66.91%
|
XP_016335933.1 limbic system-associated membrane protein-like, partial |
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0008046F:axon guidance receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
Cell Signaling
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SRR924338_primary_scf7180002517601_197-1120
Len: 923 bp
Hits: 20
E-val: 8.00E-166
Sim: 94.78%
|
XP_018963369.1 cyclin-dependent kinase 5 activator 1-like |
GO:0007411P:axon guidance GO:0007420P:brain development GO:0035622P:intrahepatic bile duct development GO:0048511P:rhythmic process GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0061575F:cyclin-dependent protein serine/threonine kinase activator activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0016533C:protein kinase 5 complex GO:0030426C:growth cone GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002517648_1-1817
Len: 1,816 bp
Hits: 20
E-val: 4.60E-24
Sim: 54.72%
|
XP_018928694.1 putative deoxyribonuclease TATDN1 |
GO:0001654P:eye development GO:0006259P:DNA metabolic process GO:0004536F:DNA nuclease activity GO:0016788F:hydrolase activity, acting on ester bonds |
Metabolism
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SRR924338_primary_scf7180002517671_1-1450
Len: 1,449 bp
Hits: 20
E-val: 1.70E-24
Sim: 97.8%
|
RXN05511.1GTP-binding 1-like isoform X1 |
GO:0006414P:translational elongation GO:0003746F:translation elongation factor activity GO:0003924F:GTPase activity GO:0005525F:GTP binding |
Other
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SRR924338_primary_scf7180002517672_1-1456
Len: 1,455 bp
Hits: 20
E-val: 2.30E-26
Sim: 72.62%
|
XP_018953162.1 nuclear pore complex protein Nup88-like |
GO:0000055P:ribosomal large subunit export from nucleus GO:0000056P:ribosomal small subunit export from nucleus GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:0017056F:structural constituent of nuclear pore GO:0005643C:nuclear pore |
Other
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SRR924338_primary_scf7180002517733_278-1357
Len: 1,079 bp
Hits: 20
E-val: 2.50E-174
Sim: 93.38%
|
XP_018964656.1 alpha-internexin-like |
GO:0045109P:intermediate filament organization GO:0048812P:neuron projection morphogenesis GO:0099185P:postsynaptic intermediate filament cytoskeleton organization GO:0099184F:structural constituent of postsynaptic intermediate filament cytoskeleton GO:0005737C:cytoplasm GO:0005882C:intermediate filament GO:0099160C:postsynaptic intermediate filament cytoskeleton |
Other
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SRR924338_primary_scf7180002517763_1-145
Len: 144 bp
Hits: 20
E-val: 1.30E-17
Sim: 99.1%
|
XP_026099336.1guanylate-binding protein 1-like |
Other
|
|
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SRR924338_primary_scf7180002517776_1-1841
Len: 1,840 bp
Hits: 20
E-val: 8.60E-10
Sim: 97.84%
|
XP_026089897.1protein transport protein Sec24A-like isoform X2 |
GO:0006886P:intracellular protein transport GO:0090110P:COPII-coated vesicle cargo loading GO:0000149F:SNARE binding GO:0008270F:zinc ion binding GO:0005789C:endoplasmic reticulum membrane GO:0005829C:cytosol GO:0030127C:COPII vesicle coat GO:0070971C:endoplasmic reticulum exit site |
Other
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SRR924338_primary_scf7180002517821_1-1486
Len: 1,485 bp
Hits: 20
E-val: 5.40E-164
Sim: 99.14%
|
XP_016136240.1 melatonin receptor type 1A-A |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0048511P:rhythmic process GO:0008502F:melatonin receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002517845_1-1572
Len: 1,571 bp
Hits: 20
E-val: 8.30E-30
Sim: 95.62%
|
RXN24263.1glutamate receptor 4 isoform X3 |
GO:0008347P:glial cell migration GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043025C:neuronal cell body GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
Cell Signaling
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SRR924338_primary_scf7180002517942_1-1797
Len: 1,796 bp
Hits: 20
E-val: 1.50E-128
Sim: 84.3%
|
XP_016373401.1 AT-rich interactive domain-containing protein 1A-like isoform X1 |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
Transcription Regulation
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SRR924338_primary_scf7180002517972_1-1765
Len: 1,764 bp
Hits: 20
E-val: 1.40E-25
Sim: 95.99%
|
RXN05261.1dynein heavy chain axonemal |
GO:0007018P:microtubule-based movement GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0030286C:dynein complex GO:0031514C:motile cilium |
Other
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SRR924338_primary_scf7180002518035_320-1243
Len: 923 bp
Hits: 20
E-val: 6.50E-168
Sim: 88.61%
|
XP_018930233.1 G-protein coupled receptor 55-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0035025P:positive regulation of Rho protein signal transduction GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002518069_1-1269
Len: 1,268 bp
Hits: 20
E-val: 2.20E-105
Sim: 98.47%
|
XP_001337205.1chondroitin sulfate glucuronyltransferase |
GO:0047238F:glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0032580C:Golgi cisterna membrane |
Other
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SRR924338_primary_scf7180002518188_908-1330
Len: 422 bp
Hits: 20
E-val: 8.10E-73
Sim: 94.75%
|
XP_018974417.1 thyrotropin-releasing hormone receptor-like |
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0004997F:thyrotropin-releasing hormone receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002518225_1-1016
Len: 1,015 bp
Hits: 20
E-val: 1.50E-16
Sim: 73.02%
|
XP_016087859.1 storkhead-box protein 2-like isoform X2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002518281_86-1101
Len: 1,015 bp
Hits: 20
E-val: 4.20E-35
Sim: 71.55%
|
XP_026104105.1adenylate cyclase type 2-like |
GO:0007188P:adenylate cyclase-modulating G protein-coupled receptor signaling pathway GO:0009190P:cyclic nucleotide biosynthetic process GO:0016849F:phosphorus-oxygen lyase activity GO:0043167F:ion binding GO:0016020C:membrane |
Cell Signaling
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SRR924338_primary_scf7180002518292_287-1588
Len: 1,301 bp
Hits: 20
E-val: 6.70E-243
Sim: 94.15%
|
XP_018933081.1 probable G-protein coupled receptor 101 |
GO:0021854P:hypothalamus development GO:0043410P:positive regulation of MAPK cascade GO:0045995P:regulation of embryonic development GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
Cell Signaling
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SRR924338_primary_scf7180002518380_1-1018
Len: 1,017 bp
Hits: 20
E-val: 1.30E-103
Sim: 97.26%
|
XP_016109952.1 thrombospondin-1-like |
GO:0007155P:cell adhesion GO:0016525P:negative regulation of angiogenesis GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0005576C:extracellular region |
Other
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SRR924338_primary_scf7180002518397_1621-1859
Len: 238 bp
Hits: 20
E-val: 2.50E-31
Sim: 98.91%
|
XP_026139566.1serine/threonine-protein kinase 40 |
GO:0006338P:chromatin remodeling GO:0043408P:regulation of MAPK cascade GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
Signal Transduction
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