Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002526371_1-1186
Len: 1,185 bp
Hits: 20
E-val: 2.00E-36
Sim: 92.93%
|
XP_018942899.1 cadherin-17-like |
GO:0000902P:cell morphogenesis GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0003925F:G protein activity GO:0005509F:calcium ion binding GO:0005525F:GTP binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
Other
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SRR924338_primary_scf7180002526393_1-831
Len: 830 bp
Hits: 20
E-val: 6.30E-29
Sim: 100%
|
XP_026070928.1chromodomain-helicase-DNA-binding protein 9-like isoform X8 |
GO:0006325P:chromatin organization GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924338_primary_scf7180002526620_1-1452
Len: 1,451 bp
Hits: 20
E-val: 2.10E-43
Sim: 67.19%
|
XP_016125728.1 sodium-dependent neutral amino acid transporter B(0)AT2-like |
GO:0046942P:carboxylic acid transport GO:0055085P:transmembrane transport GO:0015293F:symporter activity GO:0016020C:membrane |
Membrane Transport
|
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SRR924338_primary_scf7180002526734_190-1005
Len: 815 bp
Hits: 20
E-val: 1.30E-140
Sim: 90.34%
|
XP_018956568.1 claudin-14-like |
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
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SRR924338_primary_scf7180002526739_1-592
Len: 591 bp
Hits: 20
E-val: 1.60E-29
Sim: 95.77%
|
XP_018969071.1 dual specificity mitogen-activated protein kinase kinase 2-like |
GO:0032872P:regulation of stress-activated MAPK cascade GO:0090170P:regulation of Golgi inheritance GO:2000641P:regulation of early endosome to late endosome transport GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0046983F:protein dimerization activity GO:0005739C:mitochondrion GO:0005769C:early endosome GO:0005770C:late endosome GO:0005925C:focal adhesion |
Signal Transduction
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SRR924338_primary_scf7180002526949_1-768
Len: 767 bp
Hits: 20
E-val: 4.80E-15
Sim: 98.22%
|
ROL44804.1Protein TSSC1 |
Other
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|
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SRR924338_primary_scf7180002527307_256-969
Len: 713 bp
Hits: 20
E-val: 3.50E-100
Sim: 95.03%
|
XP_018965017.1 collagen alpha-1(XXVIII) chain-like |
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space |
Protein Degradation
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SRR924338_primary_scf7180002527375_1-1252
Len: 1,251 bp
Hits: 20
E-val: 2.90E-25
Sim: 99.29%
|
XP_026074196.1transcription termination factor 2 isoform X1 |
GO:0006281P:DNA repair GO:0005524F:ATP binding GO:0008094F:ATP-dependent activity, acting on DNA GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005634C:nucleus |
DNA Metabolism
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SRR924338_primary_scf7180002527447_462-771
Len: 309 bp
Hits: 20
E-val: 2.40E-13
Sim: 94.09%
|
XP_018978198.1 LOW QUALITY PROTEIN: 60S ribosomal export protein NMD3 |
GO:0000055P:ribosomal large subunit export from nucleus GO:0015031P:protein transport GO:0043023F:ribosomal large subunit binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Other
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SRR924338_primary_scf7180002527469_228-824
Len: 596 bp
Hits: 20
E-val: 8.10E-103
Sim: 98.45%
|
XP_016303848.1 GTP-binding protein Di-Ras1-like |
GO:0007165P:signal transduction GO:0048666P:neuron development GO:0061551P:trigeminal ganglion development GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0019003F:GDP binding GO:0005886C:plasma membrane |
Other
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SRR924338_primary_scf7180002527605_1-558
Len: 557 bp
Hits: 20
E-val: 1.20E-87
Sim: 98.38%
|
XP_018970926.1 pro-neuregulin-2, membrane-bound isoform-like |
GO:0007399P:nervous system development GO:0035556P:intracellular signal transduction GO:0038130P:ERBB4 signaling pathway GO:0048513P:animal organ development GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005886C:plasma membrane |
Cell Signaling
|
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SRR924338_primary_scf7180002527651_426-854
Len: 428 bp
Hits: 20
E-val: 4.20E-53
Sim: 88.47%
|
XP_018918947.1 disks large-associated protein 4-like |
GO:0023052P:signaling GO:0060090F:molecular adaptor activity GO:0098978C:glutamatergic synapse GO:0099572C:postsynaptic specialization |
Cell Signaling
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|
SRR924338_primary_scf7180002527738_1-1232
Len: 1,231 bp
Hits: 20
E-val: 4.30E-183
Sim: 99.64%
|
XP_026100778.1potassium voltage-gated channel subfamily C member 1-like |
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
Ion Transport
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SRR924338_primary_scf7180002527804_157-1493
Len: 1,336 bp
Hits: 20
E-val: 7.30E-27
Sim: 95.96%
|
XP_016393775.1 liprin-alpha-1 |
Other
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|
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SRR924338_primary_scf7180002527808_211-1302
Len: 1,091 bp
Hits: 20
E-val: 1.00E-10
Sim: 100%
|
NP_001157126.1solute carrier family 12 member 2 isoform 2 |
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0042472P:inner ear morphogenesis GO:0048798P:swim bladder inflation GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0072488P:ammonium transmembrane transport GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0008519F:ammonium channel activity GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
Ion Transport
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SRR924338_primary_scf7180002527814_1-425
Len: 424 bp
Hits: 20
E-val: 9.10E-32
Sim: 85.68%
|
XP_018930978.1 short stature homeobox protein 2 isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0008016P:regulation of heart contraction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002527925_1-901
Len: 900 bp
Hits: 20
E-val: 1.10E-61
Sim: 57.7%
|
XP_020465147.1leucine-rich repeat-containing protein 58 isoform X1 |
GO:0030154P:cell differentiation GO:0030510P:regulation of BMP signaling pathway GO:0035556P:intracellular signal transduction GO:0003674F:molecular_function GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0005575C:cellular_component GO:0005576C:extracellular region GO:0005615C:extracellular space GO:0005737C:cytoplasm |
Cell Signaling
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SRR924338_primary_scf7180002527941_1-580
Len: 579 bp
Hits: 20
E-val: 2.10E-39
Sim: 72.48%
|
XP_018966835.1 multiple epidermal growth factor-like domains protein 10 |
GO:0009987P:cellular process GO:0005886C:plasma membrane |
Other
|
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SRR924338_primary_scf7180002528082_1-458
Len: 457 bp
Hits: 20
E-val: 2.00E-32
Sim: 95.62%
|
XP_018966715.1 protein phosphatase PTC7 homolog |
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0046872F:metal ion binding GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005739C:mitochondrion |
Signal Transduction
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SRR924338_primary_scf7180002528205_1-403
Len: 402 bp
Hits: 20
E-val: 6.40E-19
Sim: 97.32%
|
RXN08807.1reelin isoform X5 |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR924338_primary_scf7180002528371_1-1249
Len: 1,248 bp
Hits: 20
E-val: 5.00E-38
Sim: 53.36%
|
XP_016308101.1 FGGY carbohydrate kinase domain-containing protein |
GO:0005975P:carbohydrate metabolic process GO:0019321P:pentose metabolic process GO:0046835P:carbohydrate phosphorylation GO:0016301F:kinase activity GO:0016773F:phosphotransferase activity, alcohol group as acceptor GO:0019150F:D-ribulokinase activity GO:0005737C:cytoplasm GO:0070461C:SAGA-type complex |
Signal Transduction
|
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SRR924338_primary_scf7180002528482_1-502
Len: 501 bp
Hits: 20
E-val: 3.10E-31
Sim: 94.22%
|
XP_026115860.1neuroligin-3-like isoform X2 |
GO:0007158P:neuron cell-cell adhesion GO:0048488P:synaptic vesicle endocytosis GO:0050804P:modulation of chemical synaptic transmission GO:0097104P:postsynaptic membrane assembly GO:0097105P:presynaptic membrane assembly GO:0038023F:signaling receptor activity GO:0042043F:neurexin family protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098793C:presynapse |
Cell Signaling
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SRR924338_primary_scf7180002528645_413-1264
Len: 851 bp
Hits: 20
E-val: 4.10E-23
Sim: 91.49%
|
NP_957490.1short stature homeobox protein 2 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0008016P:regulation of heart contraction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
Transcription Regulation
|
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SRR924338_primary_scf7180002529074_262-904
Len: 642 bp
Hits: 20
E-val: 6.00E-35
Sim: 97.08%
|
XP_017570429.1 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 |
GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding |
Other
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SRR924338_primary_scf7180002529199_1-1185
Len: 1,184 bp
Hits: 20
E-val: 7.90E-41
Sim: 98.3%
|
XP_016355022.1 utrophin |
GO:0099536P:synaptic signaling GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0045211C:postsynaptic membrane GO:0120025C:plasma membrane bounded cell projection |
Cell Signaling
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