Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
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SRR924338_primary_scf7180002606557_1-843
Len: 842 bp
Hits: 20
E-val: 8.50E-106
Sim: 90.85%
|
XP_018919172.1 ectopic P granules protein 5 homolog |
GO:0006338P:chromatin remodeling GO:0036335P:intestinal stem cell homeostasis GO:0060576P:intestinal epithelial cell development GO:0061909P:autophagosome-lysosome fusion GO:0097352P:autophagosome maturation GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0046872F:metal ion binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm |
Signal Transduction
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SRR924338_primary_scf7180002606608_1-1094
Len: 1,093 bp
Hits: 20
E-val: 3.20E-44
Sim: 60.6%
|
ROL52067.1Condensin complex subunit 1 |
GO:0000070P:mitotic sister chromatid segregation GO:0030261P:chromosome condensation GO:0005694C:chromosome |
Other
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SRR924338_primary_scf7180002606684_141-1247
Len: 1,106 bp
Hits: 20
E-val: 5.80E-30
Sim: 88.8%
|
ROL51208.1Reelin |
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
Cell Signaling
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SRR924338_primary_scf7180002607041_26-843
Len: 817 bp
Hits: 20
E-val: 3.00E-71
Sim: 80.11%
|
XP_026106193.1equilibrative nucleoside transporter 4 isoform X2 |
GO:0015844P:monoamine transport GO:1901642P:nucleoside transmembrane transport GO:0005337F:nucleoside transmembrane transporter activity GO:0008504F:monoamine transmembrane transporter activity GO:0005886C:plasma membrane |
Membrane Transport
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SRR924338_primary_scf7180002607274_1-1009
Len: 1,008 bp
Hits: 20
E-val: 3.40E-45
Sim: 65.21%
|
XP_026082586.1neurofibromin-like isoform X1 |
GO:0001568P:blood vessel development GO:0007507P:heart development GO:0007613P:memory GO:0045685P:regulation of glial cell differentiation GO:0046959P:habituation GO:0051726P:regulation of cell cycle GO:0060251P:regulation of glial cell proliferation GO:0070373P:negative regulation of ERK1 and ERK2 cascade GO:0070444P:oligodendrocyte progenitor proliferation |
Other
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SRR924338_primary_scf7180002607368_366-1491
Len: 1,125 bp
Hits: 20
E-val: 3.60E-128
Sim: 94.13%
|
XP_018938136.1 protein O-mannose kinase |
GO:0006493P:protein O-linked glycosylation GO:0036268P:swimming GO:0046835P:carbohydrate phosphorylation GO:0061061P:muscle structure development GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0019200F:carbohydrate kinase activity GO:0030247F:polysaccharide binding GO:0043531F:ADP binding GO:0005789C:endoplasmic reticulum membrane |
Signal Transduction
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|
SRR924338_primary_scf7180002607644_442-1817
Len: 1,375 bp
Hits: 20
E-val: 2.00E-88
Sim: 89.25%
|
XP_018932644.1 alpha-2,8-sialyltransferase 8F-like |
GO:0006491P:N-glycan processing GO:0009311P:oligosaccharide metabolic process GO:0003828F:alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity GO:0000139C:Golgi membrane |
Metabolism
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SRR924338_primary_scf7180002607653_1-306
Len: 305 bp
Hits: 20
E-val: 3.10E-26
Sim: 100%
|
XP_026056253.1importin subunit alpha-5 isoform X2 |
GO:0006606P:protein import into nucleus GO:0048513P:animal organ development GO:0061608F:nuclear import signal receptor activity GO:0005737C:cytoplasm |
Cell Signaling
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SRR924338_primary_scf7180002607683_1-363
Len: 362 bp
Hits: 20
E-val: 2.80E-34
Sim: 100%
|
XP_026130874.1claudin-19-like isoform X1 |
GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
|
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SRR924338_primary_scf7180002607826_239-779
Len: 540 bp
Hits: 20
E-val: 1.60E-17
Sim: 94.76%
|
NP_001116737.1inhibitor of nuclear factor kappa-B kinase subunit beta |
GO:0006508P:proteolysis GO:0033209P:tumor necrosis factor-mediated signaling pathway GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051604P:protein maturation GO:0070498P:interleukin-1-mediated signaling pathway GO:0072659P:protein localization to plasma membrane GO:1903140P:regulation of establishment of endothelial barrier GO:1903347P:negative regulation of bicellular tight junction assembly GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0008384F:IkappaB kinase activity GO:0019901F:protein kinase binding GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0097110F:scaffold protein binding GO:1990459F:transferrin receptor binding GO:0005634C:nucleus GO:0008385C:IkappaB kinase complex |
Signal Transduction
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|
SRR924338_primary_scf7180002607891_162-1079
Len: 917 bp
Hits: 20
E-val: 2.00E-76
Sim: 60.33%
|
XP_018947068.1 sodium/potassium-transporting ATPase subunit alpha-2-like |
GO:0001947P:heart looping GO:0001966P:thigmotaxis GO:0007519P:skeletal muscle tissue development GO:0010084P:specification of animal organ axis polarity GO:0030001P:metal ion transport GO:0042044P:fluid transport GO:0044238P:primary metabolic process GO:0051480P:regulation of cytosolic calcium ion concentration GO:0060047P:heart contraction GO:0098655P:monoatomic cation transmembrane transport GO:0140657F:ATP-dependent activity GO:0016020C:membrane |
Ion Transport
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SRR924338_primary_scf7180002607947_117-821
Len: 704 bp
Hits: 20
E-val: 5.60E-127
Sim: 85.49%
|
XP_018925254.1 eomesodermin-like |
GO:0001707P:mesoderm formation GO:0001714P:endodermal cell fate specification GO:0002302P:CD8-positive, alpha-beta T cell differentiation involved in immune response GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
Transcription Regulation
|
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SRR924338_primary_scf7180002607955_1-500
Len: 499 bp
Hits: 20
E-val: 3.90E-18
Sim: 92.64%
|
XP_018968008.1 alkaline ceramidase 2-like |
GO:0046512P:sphingosine biosynthetic process GO:0046514P:ceramide catabolic process GO:0017040F:N-acylsphingosine amidohydrolase activity GO:0000139C:Golgi membrane |
Other
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SRR924338_primary_scf7180002607996_215-949
Len: 734 bp
Hits: 20
E-val: 4.50E-127
Sim: 97.93%
|
AAI35073.1Htr5a protein |
GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007268P:chemical synaptic transmission GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0098664P:G protein-coupled serotonin receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0030594F:neurotransmitter receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite GO:0045202C:synapse |
Cell Signaling
|
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SRR924338_primary_scf7180002608031_25-1065
Len: 1,040 bp
Hits: 20
E-val: 2.80E-159
Sim: 95.25%
|
XP_016087853.1 storkhead-box protein 2-like isoform X1 |
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
Transcription Regulation
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SRR924338_primary_scf7180002608035_1-846
Len: 845 bp
Hits: 20
E-val: 3.20E-36
Sim: 93.54%
|
XP_018923907.1 tight junction protein ZO-1-like isoform X1 |
GO:0045216P:cell-cell junction organization GO:0090557P:establishment of endothelial intestinal barrier GO:0098609P:cell-cell adhesion GO:0150105P:protein localization to cell-cell junction GO:1905605P:positive regulation of blood-brain barrier permeability GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
Other
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SRR924338_primary_scf7180002608389_522-1220
Len: 698 bp
Hits: 20
E-val: 1.60E-126
Sim: 98.15%
|
ACF35050.1brain-derived neurotrophic factor, partial |
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007420P:brain development GO:0021675P:nerve development GO:0033555P:multicellular organismal response to stress GO:0038180P:nerve growth factor signaling pathway GO:0043524P:negative regulation of neuron apoptotic process GO:0048512P:circadian behavior GO:0048812P:neuron projection morphogenesis GO:0050804P:modulation of chemical synaptic transmission GO:0071542P:dopaminergic neuron differentiation GO:0099054P:presynapse assembly GO:0005163F:nerve growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0008021C:synaptic vesicle GO:0030424C:axon GO:0030425C:dendrite |
Signal Transduction
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SRR924338_primary_scf7180002608414_165-974
Len: 809 bp
Hits: 20
E-val: 3.20E-142
Sim: 90.1%
|
XP_018926343.1 homeobox protein TGIF2-like |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
Transcription Regulation
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SRR924338_primary_scf7180002608500_1-500
Len: 499 bp
Hits: 20
E-val: 6.10E-27
Sim: 99.92%
|
RXN19581.1myosin-9 isoform X1 |
GO:0003231P:cardiac ventricle development GO:0008360P:regulation of cell shape GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0070650P:actin filament bundle distribution GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005938C:cell cortex GO:0016460C:myosin II complex GO:0032982C:myosin filament GO:0060473C:cortical granule |
Other
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SRR924338_primary_scf7180002608747_142-1136
Len: 994 bp
Hits: 20
E-val: 6.00E-34
Sim: 93.37%
|
XP_016113606.1 LOW QUALITY PROTEIN: protein TANC2-like |
GO:0061001P:regulation of dendritic spine morphogenesis GO:0043197C:dendritic spine |
Other
|
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SRR924338_primary_scf7180002609158_1-695
Len: 694 bp
Hits: 20
E-val: 2.70E-113
Sim: 97.2%
|
XP_018963478.1 ras-related protein Rab-9A-like |
GO:0015031P:protein transport GO:0032482P:Rab protein signal transduction GO:0042147P:retrograde transport, endosome to Golgi GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005764C:lysosome GO:0005770C:late endosome GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0030670C:phagocytic vesicle membrane |
Other
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SRR924338_primary_scf7180002609699_1-1034
Len: 1,033 bp
Hits: 20
E-val: 3.70E-18
Sim: 92.76%
|
XP_016379534.1 LOW QUALITY PROTEIN: netrin receptor DCC |
GO:0001764P:neuron migration GO:0016358P:dendrite development GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0031103P:axon regeneration GO:0033564P:anterior/posterior axon guidance GO:0048665P:neuron fate specification GO:0048846P:axon extension involved in axon guidance GO:0050918P:positive chemotaxis GO:0071678P:olfactory bulb axon guidance GO:0071679P:commissural neuron axon guidance GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0038006F:netrin receptor activity involved in chemoattraction GO:0005886C:plasma membrane GO:0009986C:cell surface |
Cell Signaling
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SRR924338_primary_scf7180002609887_1-1004
Len: 1,003 bp
Hits: 20
E-val: 4.80E-31
Sim: 94.91%
|
XP_016085598.1 cadherin-23-like |
GO:0006897P:endocytosis GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0035678P:neuromast hair cell morphogenesis GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound GO:0050957P:equilibrioception GO:0055085P:transmembrane transport GO:0060117P:auditory receptor cell development GO:0060122P:inner ear receptor cell stereocilium organization GO:0061512P:protein localization to cilium GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0022857F:transmembrane transporter activity GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0005929C:cilium GO:0016342C:catenin complex |
Cell Signaling
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SRR924338_primary_scf7180002609928_1-1040
Len: 1,039 bp
Hits: 20
E-val: 3.20E-30
Sim: 72.39%
|
KPP65504.1mediator of RNA polymerase II transcription subunit 25-like |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060021P:roof of mouth development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
Transcription Regulation
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SRR924338_primary_scf7180002610071_1-769
Len: 768 bp
Hits: 20
E-val: 1.40E-30
Sim: 95.67%
|
XP_018926558.1 ras-related protein Rab-11B-like |
GO:0003924F:GTPase activity GO:0005525F:GTP binding |
Other
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