Functional and statistical data for significant genes
| Sequence & Stats | Description | GO Annotations | Gene Function |
|---|---|---|---|
|
SRR924338_primary_scf7180002610135_1-722
Len: 721 bp
Hits: 20
E-val: 6.70E-27
Sim: 52.76%
|
XP_016379621.1 vesicular integral-membrane protein VIP36-like |
GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
Other
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SRR924338_primary_scf7180002610251_1-1160
Len: 1,159 bp
Hits: 20
E-val: 2.80E-14
Sim: 99.07%
|
RXN02453.1phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 |
GO:0007155P:cell adhesion GO:0030509P:BMP signaling pathway GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0043569P:negative regulation of insulin-like growth factor receptor signaling pathway GO:0046856P:phosphatidylinositol dephosphorylation GO:0050776P:regulation of immune response GO:0090024P:negative regulation of neutrophil chemotaxis GO:0003779F:actin binding GO:0004445F:inositol-polyphosphate 5-phosphatase activity GO:0034485F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0016020C:membrane GO:0016607C:nuclear speck GO:0030027C:lamellipodium GO:0030175C:filopodium |
Cell Signaling
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SRR924338_primary_scf7180002610786_337-861
Len: 524 bp
Hits: 20
E-val: 3.90E-24
Sim: 94.69%
|
XP_018957427.1 protein C10-like |
Other
|
|
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SRR924338_primary_scf7180002610819_199-753
Len: 554 bp
Hits: 20
E-val: 1.70E-41
Sim: 86.87%
|
XP_018922645.1 protein FAM69C-like |
GO:0016301F:kinase activity GO:0005789C:endoplasmic reticulum membrane |
Signal Transduction
|
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SRR924338_primary_scf7180002610840_1-853
Len: 852 bp
Hits: 20
E-val: 2.20E-16
Sim: 99.67%
|
CAF88340.1unnamed protein product, partial |
GO:0035556P:intracellular signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0106310F:protein serine kinase activity GO:0005737C:cytoplasm |
Signal Transduction
|
|
SRR924338_primary_scf7180002610868_1-818
Len: 817 bp
Hits: 20
E-val: 6.90E-153
Sim: 99.07%
|
XP_018974425.1 growth hormone secretagogue receptor type 1-like isoform X2 |
GO:0007186P:G protein-coupled receptor signaling pathway GO:0009755P:hormone-mediated signaling pathway GO:0001616F:growth hormone secretagogue receptor activity GO:0005886C:plasma membrane GO:0048471C:perinuclear region of cytoplasm |
Cell Signaling
|
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SRR924338_primary_scf7180002610913_1-995
Len: 994 bp
Hits: 20
E-val: 3.30E-40
Sim: 91.36%
|
XP_016402326.1 nuclear pore complex protein Nup133-like |
GO:0000972P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery GO:0006606P:protein import into nucleus GO:0016973P:poly(A)+ mRNA export from nucleus GO:0017056F:structural constituent of nuclear pore GO:0000776C:kinetochore GO:0031080C:nuclear pore outer ring |
Transcription Regulation
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SRR924338_primary_scf7180002611093_1-659
Len: 658 bp
Hits: 20
E-val: 9.10E-39
Sim: 68.61%
|
XP_026132518.1histone acetyltransferase p300-like isoform X6 |
GO:0001947P:heart looping GO:0006355P:regulation of DNA-templated transcription GO:0033339P:pectoral fin development GO:0048701P:embryonic cranial skeleton morphogenesis GO:0005488F:binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0043998F:histone H2A acetyltransferase activity GO:0044013F:histone H2B acetyltransferase activity GO:0005634C:nucleus GO:0032991C:protein-containing complex |
Transcription Regulation
|
|
SRR924338_primary_scf7180002611443_1-1029
Len: 1,028 bp
Hits: 20
E-val: 1.90E-59
Sim: 75.02%
|
NP_571474.1retinoic acid receptor alpha-B |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001889P:liver development GO:0003139P:secondary heart field specification GO:0030154P:cell differentiation GO:0030917P:midbrain-hindbrain boundary development GO:0033339P:pectoral fin development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048384P:retinoic acid receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0004879F:nuclear receptor activity GO:0005634C:nucleus |
Cell Signaling
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|
SRR924338_primary_scf7180002611500_1-891
Len: 890 bp
Hits: 20
E-val: 2.00E-36
Sim: 68.15%
|
RXN39402.1phosphorylase b kinase regulatory subunit skeletal muscle isoform-like protein |
GO:0005977P:glycogen metabolic process GO:0005516F:calmodulin binding GO:0005886C:plasma membrane GO:0005964C:phosphorylase kinase complex |
Signal Transduction
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|
SRR924338_primary_scf7180002611751_534-1098
Len: 564 bp
Hits: 20
E-val: 6.20E-20
Sim: 96.72%
|
XP_026135277.1V-type proton ATPase 116 kDa subunit a-like |
GO:0007035P:vacuolar acidification GO:1902600P:proton transmembrane transport GO:0046961F:proton-transporting ATPase activity, rotational mechanism GO:0051117F:ATPase binding GO:0000220C:vacuolar proton-transporting V-type ATPase, V0 domain GO:0005886C:plasma membrane |
Membrane Transport
|
|
SRR924338_primary_scf7180002611789_1-809
Len: 808 bp
Hits: 20
E-val: 4.00E-44
Sim: 60.48%
|
XP_018944019.1 BICD family-like cargo adapter 1 isoform X1 |
GO:0047496P:vesicle transport along microtubule GO:0055107P:Golgi to secretory granule transport GO:0005737C:cytoplasm |
Other
|
|
SRR924338_primary_scf7180002612019_1-959
Len: 958 bp
Hits: 20
E-val: 7.10E-32
Sim: 97.2%
|
XP_026064469.1trinucleotide repeat-containing gene 6A protein-like |
GO:0006417P:regulation of translation GO:0035195P:miRNA-mediated post-transcriptional gene silencing GO:0060213P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0003723F:RNA binding GO:0000932C:P-body GO:0005654C:nucleoplasm GO:0005829C:cytosol |
Transcription Regulation
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|
SRR924338_primary_scf7180002612147_1-887
Len: 886 bp
Hits: 20
E-val: 5.50E-55
Sim: 99.95%
|
XP_018933242.1 tyrosine-protein phosphatase non-receptor type 9-like |
GO:0000467P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0016075P:rRNA catabolic process GO:0034473P:U1 snRNA 3'-end processing GO:0034475P:U4 snRNA 3'-end processing GO:0034476P:U5 snRNA 3'-end processing GO:0071028P:nuclear mRNA surveillance GO:0071035P:nuclear polyadenylation-dependent rRNA catabolic process GO:0071038P:TRAMP-dependent tRNA surveillance pathway GO:0004725F:protein tyrosine phosphatase activity GO:0035925F:mRNA 3'-UTR AU-rich region binding GO:0000176C:nuclear exosome (RNase complex) GO:0000177C:cytoplasmic exosome (RNase complex) |
Other
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SRR924338_primary_scf7180002612756_1-613
Len: 612 bp
Hits: 20
E-val: 3.60E-37
Sim: 60.01%
|
XP_026081711.1proprotein convertase subtilisin/kexin type 7-like |
GO:0001654P:eye development GO:0007420P:brain development GO:0043009P:chordate embryonic development GO:0048840P:otolith development |
Other
|
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SRR924338_primary_scf7180002613152_19-1248
Len: 1,229 bp
Hits: 20
E-val: 9.90E-188
Sim: 84.94%
|
XP_018982193.1 receptor-interacting serine/threonine-protein kinase 4-like |
GO:0006954P:inflammatory response GO:0042981P:regulation of apoptotic process GO:0045087P:innate immune response GO:0005737C:cytoplasm |
Other
|
|
SRR924338_primary_scf7180002613333_1-943
Len: 942 bp
Hits: 20
E-val: 9.10E-40
Sim: 63.86%
|
XP_016141125.1 telomerase Cajal body protein 1 isoform X3 |
GO:0030576P:Cajal body organization GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0003723F:RNA binding GO:0005829C:cytosol GO:0015030C:Cajal body |
Cell Signaling
|
|
SRR924338_primary_scf7180002613595_142-861
Len: 719 bp
Hits: 20
E-val: 3.40E-79
Sim: 92.43%
|
XP_018975666.1 zinc finger protein 513-like isoform X1 |
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
Transcription Regulation
|
|
SRR924338_primary_scf7180002614662_1-451
Len: 450 bp
Hits: 20
E-val: 2.30E-25
Sim: 97.74%
|
XP_016415451.1 synaptotagmin-9-like |
GO:0007268P:chemical synaptic transmission GO:0017158P:regulation of calcium ion-dependent exocytosis GO:0031340P:positive regulation of vesicle fusion GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0061891F:calcium ion sensor activity GO:0005886C:plasma membrane GO:0031045C:dense core granule GO:0045202C:synapse GO:0070382C:exocytic vesicle |
Other
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SRR924338_primary_scf7180002615644_1-1100
Len: 1,099 bp
Hits: 20
E-val: 6.20E-32
Sim: 62.7%
|
XP_018936910.1 LOW QUALITY PROTEIN: lysine-specific demethylase 5A-like |
GO:0009987P:cellular process GO:0003824F:catalytic activity |
Other
|
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SRR924338_primary_scf7180002615853_1-988
Len: 987 bp
Hits: 20
E-val: 1.70E-41
Sim: 73.39%
|
XP_018965533.1 beta-crystallin B1-like |
GO:0002088P:lens development in camera-type eye GO:0007601P:visual perception GO:0005212F:structural constituent of eye lens |
Other
|
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SRR924338_primary_scf7180002616570_413-916
Len: 503 bp
Hits: 20
E-val: 9.30E-68
Sim: 90.95%
|
XP_018925110.1 coiled-coil domain-containing protein 66-like isoform X1 |
Other
|
|
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SRR924338_primary_scf7180002617531_160-1141
Len: 981 bp
Hits: 20
E-val: 4.80E-84
Sim: 95.16%
|
XP_018949126.1 zinc finger protein 319-like isoform X1 |
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
Signal Transduction
|
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SRR924338_primary_scf7180002617729_483-731
Len: 248 bp
Hits: 20
E-val: 2.50E-26
Sim: 97.76%
|
XP_026099494.1thrombospondin type-1 domain-containing protein 7A-like, partial |
GO:0002040P:sprouting angiogenesis GO:0003094P:glomerular filtration GO:0008593P:regulation of Notch signaling pathway GO:0030036P:actin cytoskeleton organization GO:0043534P:blood vessel endothelial cell migration GO:0048675P:axon extension GO:0072015P:podocyte development GO:0005886C:plasma membrane GO:0042995C:cell projection |
Cell Signaling
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SRR924338_primary_scf7180002617971_1-1219
Len: 1,218 bp
Hits: 20
E-val: 5.10E-27
Sim: 99.11%
|
XP_026054921.1FERM domain-containing protein 4B-like |
GO:0090162P:establishment of epithelial cell polarity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005912C:adherens junction GO:0005923C:bicellular tight junction GO:0016020C:membrane |
Other
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